data_3OO4
#
_model_server_result.job_id            9AmjZWONNfOFbBJw8ePkDw 
_model_server_result.datetime_utc      '2024-11-22 06:48:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3oo4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":143}' 
#
_entry.id    3OO4 
#
_exptl.entry_id    3OO4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              46.005 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NITRITE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3OO4 
_cell.length_a            53.487 
_cell.length_b            53.487 
_cell.length_c            190.001 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OO4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 C FE NTE . A NTE 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? 
metalc ? metalc2 C FE NTE . A NTE 142 1_555 D O1 NO2 . A NO2 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? 
metalc ? metalc3 C FE NTE . A NTE 142 1_555 D N NO2 . A NO2 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? 
metalc ? metalc4 B NE2 HIS 92 B HIS 92 1_555 E FE HEM . B HEM 147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc5 E FE HEM . B HEM 147 1_555 F O1 NO2 . B NO2 148 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
#
_chem_comp.formula           'N O2 -1' 
_chem_comp.formula_weight    46.005 
_chem_comp.id                NO2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NITRITE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N O1 NO2 doub 298 n n 
N O2 NO2 sing 299 n n 
#
_atom_sites.entry_id                     3OO4 
_atom_sites.fract_transf_matrix[1][1]    0.018696 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018696 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005263 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 NTE A 1 142 142 NTE NTE . 
D 4 NO2 A 1 143 1 NO2 NO2 . 
E 5 HEM B 1 147 147 HEM HEM . 
F 4 NO2 B 1 148 2 NO2 NO2 . 
G 6 HOH A 1 144 1 HOH HOH . 
G 6 HOH A 2 145 145 HOH HOH . 
G 6 HOH A 3 146 2 HOH HOH . 
G 6 HOH A 4 147 147 HOH HOH . 
G 6 HOH A 5 148 6 HOH HOH . 
G 6 HOH A 6 149 149 HOH HOH . 
G 6 HOH A 7 150 8 HOH HOH . 
G 6 HOH A 8 151 151 HOH HOH . 
G 6 HOH A 9 152 10 HOH HOH . 
G 6 HOH A 10 153 153 HOH HOH . 
G 6 HOH A 11 154 154 HOH HOH . 
G 6 HOH A 12 155 155 HOH HOH . 
G 6 HOH A 13 156 156 HOH HOH . 
G 6 HOH A 14 157 157 HOH HOH . 
G 6 HOH A 15 158 12 HOH HOH . 
G 6 HOH A 16 159 13 HOH HOH . 
G 6 HOH A 17 160 160 HOH HOH . 
G 6 HOH A 18 161 161 HOH HOH . 
G 6 HOH A 19 162 14 HOH HOH . 
G 6 HOH A 20 163 163 HOH HOH . 
G 6 HOH A 21 164 164 HOH HOH . 
G 6 HOH A 22 165 165 HOH HOH . 
G 6 HOH A 23 166 166 HOH HOH . 
G 6 HOH A 24 167 15 HOH HOH . 
G 6 HOH A 25 168 17 HOH HOH . 
G 6 HOH A 26 169 19 HOH HOH . 
G 6 HOH A 27 170 20 HOH HOH . 
G 6 HOH A 28 171 21 HOH HOH . 
G 6 HOH A 29 172 23 HOH HOH . 
G 6 HOH A 30 173 24 HOH HOH . 
G 6 HOH A 31 174 25 HOH HOH . 
G 6 HOH A 32 175 26 HOH HOH . 
G 6 HOH A 33 176 27 HOH HOH . 
G 6 HOH A 34 177 28 HOH HOH . 
G 6 HOH A 35 178 30 HOH HOH . 
G 6 HOH A 36 179 34 HOH HOH . 
G 6 HOH A 37 180 36 HOH HOH . 
G 6 HOH A 38 181 37 HOH HOH . 
G 6 HOH A 39 182 38 HOH HOH . 
G 6 HOH A 40 183 40 HOH HOH . 
G 6 HOH A 41 184 41 HOH HOH . 
G 6 HOH A 42 185 43 HOH HOH . 
G 6 HOH A 43 186 47 HOH HOH . 
G 6 HOH A 44 187 49 HOH HOH . 
G 6 HOH A 45 188 51 HOH HOH . 
G 6 HOH A 46 189 53 HOH HOH . 
G 6 HOH A 47 190 54 HOH HOH . 
G 6 HOH A 48 191 56 HOH HOH . 
G 6 HOH A 49 192 59 HOH HOH . 
G 6 HOH A 50 193 60 HOH HOH . 
G 6 HOH A 51 194 61 HOH HOH . 
G 6 HOH A 52 195 63 HOH HOH . 
G 6 HOH A 53 196 68 HOH HOH . 
G 6 HOH A 54 197 69 HOH HOH . 
G 6 HOH A 55 198 70 HOH HOH . 
G 6 HOH A 56 199 75 HOH HOH . 
G 6 HOH A 57 200 76 HOH HOH . 
G 6 HOH A 58 201 77 HOH HOH . 
G 6 HOH A 59 202 79 HOH HOH . 
G 6 HOH A 60 203 80 HOH HOH . 
G 6 HOH A 61 204 82 HOH HOH . 
G 6 HOH A 62 205 83 HOH HOH . 
G 6 HOH A 63 206 84 HOH HOH . 
G 6 HOH A 64 207 87 HOH HOH . 
G 6 HOH A 65 208 89 HOH HOH . 
G 6 HOH A 66 209 92 HOH HOH . 
G 6 HOH A 67 210 93 HOH HOH . 
G 6 HOH A 68 211 94 HOH HOH . 
G 6 HOH A 69 212 95 HOH HOH . 
G 6 HOH A 70 213 96 HOH HOH . 
G 6 HOH A 71 214 98 HOH HOH . 
G 6 HOH A 72 215 99 HOH HOH . 
G 6 HOH A 73 216 100 HOH HOH . 
G 6 HOH A 74 217 101 HOH HOH . 
G 6 HOH A 75 218 102 HOH HOH . 
G 6 HOH A 76 219 103 HOH HOH . 
G 6 HOH A 77 220 105 HOH HOH . 
G 6 HOH A 78 221 106 HOH HOH . 
G 6 HOH A 79 222 108 HOH HOH . 
G 6 HOH A 80 223 111 HOH HOH . 
G 6 HOH A 81 224 112 HOH HOH . 
G 6 HOH A 82 225 113 HOH HOH . 
G 6 HOH A 83 226 114 HOH HOH . 
G 6 HOH A 84 227 118 HOH HOH . 
G 6 HOH A 85 228 120 HOH HOH . 
G 6 HOH A 86 229 123 HOH HOH . 
G 6 HOH A 87 230 124 HOH HOH . 
G 6 HOH A 88 231 126 HOH HOH . 
G 6 HOH A 89 232 132 HOH HOH . 
G 6 HOH A 90 233 137 HOH HOH . 
G 6 HOH A 91 234 138 HOH HOH . 
G 6 HOH A 92 235 139 HOH HOH . 
G 6 HOH A 93 236 140 HOH HOH . 
G 6 HOH A 94 237 141 HOH HOH . 
G 6 HOH A 95 238 142 HOH HOH . 
G 6 HOH A 96 239 143 HOH HOH . 
H 6 HOH B 1 149 3 HOH HOH . 
H 6 HOH B 2 150 150 HOH HOH . 
H 6 HOH B 3 151 4 HOH HOH . 
H 6 HOH B 4 152 152 HOH HOH . 
H 6 HOH B 5 153 5 HOH HOH . 
H 6 HOH B 6 154 7 HOH HOH . 
H 6 HOH B 7 155 9 HOH HOH . 
H 6 HOH B 8 156 11 HOH HOH . 
H 6 HOH B 9 157 16 HOH HOH . 
H 6 HOH B 10 158 158 HOH HOH . 
H 6 HOH B 11 159 159 HOH HOH . 
H 6 HOH B 12 160 18 HOH HOH . 
H 6 HOH B 13 161 22 HOH HOH . 
H 6 HOH B 14 162 162 HOH HOH . 
H 6 HOH B 15 163 29 HOH HOH . 
H 6 HOH B 16 164 31 HOH HOH . 
H 6 HOH B 17 165 32 HOH HOH . 
H 6 HOH B 18 166 33 HOH HOH . 
H 6 HOH B 19 167 35 HOH HOH . 
H 6 HOH B 20 168 39 HOH HOH . 
H 6 HOH B 21 169 42 HOH HOH . 
H 6 HOH B 22 170 44 HOH HOH . 
H 6 HOH B 23 171 45 HOH HOH . 
H 6 HOH B 24 172 46 HOH HOH . 
H 6 HOH B 25 173 48 HOH HOH . 
H 6 HOH B 26 174 50 HOH HOH . 
H 6 HOH B 27 175 52 HOH HOH . 
H 6 HOH B 28 176 55 HOH HOH . 
H 6 HOH B 29 177 57 HOH HOH . 
H 6 HOH B 30 178 58 HOH HOH . 
H 6 HOH B 31 179 62 HOH HOH . 
H 6 HOH B 32 180 64 HOH HOH . 
H 6 HOH B 33 181 65 HOH HOH . 
H 6 HOH B 34 182 66 HOH HOH . 
H 6 HOH B 35 183 67 HOH HOH . 
H 6 HOH B 36 184 71 HOH HOH . 
H 6 HOH B 37 185 72 HOH HOH . 
H 6 HOH B 38 186 73 HOH HOH . 
H 6 HOH B 39 187 74 HOH HOH . 
H 6 HOH B 40 188 78 HOH HOH . 
H 6 HOH B 41 189 81 HOH HOH . 
H 6 HOH B 42 190 85 HOH HOH . 
H 6 HOH B 43 191 86 HOH HOH . 
H 6 HOH B 44 192 88 HOH HOH . 
H 6 HOH B 45 193 90 HOH HOH . 
H 6 HOH B 46 194 91 HOH HOH . 
H 6 HOH B 47 195 97 HOH HOH . 
H 6 HOH B 48 196 104 HOH HOH . 
H 6 HOH B 49 197 107 HOH HOH . 
H 6 HOH B 50 198 109 HOH HOH . 
H 6 HOH B 51 199 110 HOH HOH . 
H 6 HOH B 52 200 115 HOH HOH . 
H 6 HOH B 53 201 116 HOH HOH . 
H 6 HOH B 54 202 117 HOH HOH . 
H 6 HOH B 55 203 119 HOH HOH . 
H 6 HOH B 56 204 121 HOH HOH . 
H 6 HOH B 57 205 122 HOH HOH . 
H 6 HOH B 58 206 125 HOH HOH . 
H 6 HOH B 59 207 127 HOH HOH . 
H 6 HOH B 60 208 128 HOH HOH . 
H 6 HOH B 61 209 129 HOH HOH . 
H 6 HOH B 62 210 130 HOH HOH . 
H 6 HOH B 63 211 131 HOH HOH . 
H 6 HOH B 64 212 133 HOH HOH . 
H 6 HOH B 65 213 134 HOH HOH . 
H 6 HOH B 66 214 135 HOH HOH . 
H 6 HOH B 67 215 136 HOH HOH . 
H 6 HOH B 68 216 144 HOH HOH . 
H 6 HOH B 69 217 146 HOH HOH . 
H 6 HOH B 70 218 148 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N NO2 . . . D 4 11.197 2.253 16.149 1 23.8 ? N NO2 143 A 1 
HETATM 2 O O1 NO2 . . . D 4 12.373 2.028 16.452 1 24.09 ? O1 NO2 143 A 1 
HETATM 3 O O2 NO2 . . . D 4 10.515 1.794 17.061 1 23.8 ? O2 NO2 143 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           3 
#