data_3OOT
#
_model_server_result.job_id            Vh4A0qcvOVLOghi1kc8HOg 
_model_server_result.datetime_utc      '2024-10-19 09:28:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3oot 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":367}' 
#
_entry.id    3OOT 
#
_exptl.entry_id    3OOT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3OOT 
_cell.length_a            143.554 
_cell.length_b            143.554 
_cell.length_c            143.554 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OOT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        198 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 51 A CYS 45 1_555 A SG CYS 58 A CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf2 A SG CYS 217 A CYS 206 1_555 A SG CYS 221 A CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf3 A SG CYS 259 A CYS 249 1_555 A SG CYS 296 A CYS 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf4 B SG CYS 51 B CYS 45 1_555 B SG CYS 58 B CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf5 B SG CYS 217 B CYS 206 1_555 B SG CYS 221 B CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf6 B SG CYS 259 B CYS 249 1_555 B SG CYS 296 B CYS 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
covale ? covale1 A ND2 ASN 75 A ASN 67 1_555 C C1 NAG . A NAG 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.462 ? 
covale ? covale2 B ND2 ASN 75 B ASN 67 1_555 E C1 NAG . B NAG 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.474 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     3OOT 
_atom_sites.fract_transf_matrix[1][1]    0.006966 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006966 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006966 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAG A 1 367 367 NAG NAG . 
D 3 SSR A 1 327 1 SSR SSR . 
E 2 NAG B 1 367 367 NAG NAG . 
F 3 SSR B 1 327 1 SSR SSR . 
G 4 HOH A 1 98 98 HOH HOH . 
G 4 HOH A 2 328 3 HOH HOH . 
G 4 HOH A 3 329 5 HOH HOH . 
G 4 HOH A 4 330 6 HOH HOH . 
G 4 HOH A 5 331 8 HOH HOH . 
G 4 HOH A 6 332 10 HOH HOH . 
G 4 HOH A 7 333 11 HOH HOH . 
G 4 HOH A 8 334 13 HOH HOH . 
G 4 HOH A 9 335 16 HOH HOH . 
G 4 HOH A 10 336 17 HOH HOH . 
G 4 HOH A 11 337 18 HOH HOH . 
G 4 HOH A 12 338 19 HOH HOH . 
G 4 HOH A 13 339 21 HOH HOH . 
G 4 HOH A 14 340 23 HOH HOH . 
G 4 HOH A 15 341 25 HOH HOH . 
G 4 HOH A 16 342 26 HOH HOH . 
G 4 HOH A 17 343 27 HOH HOH . 
G 4 HOH A 18 344 28 HOH HOH . 
G 4 HOH A 19 345 29 HOH HOH . 
G 4 HOH A 20 346 30 HOH HOH . 
G 4 HOH A 21 347 33 HOH HOH . 
G 4 HOH A 22 348 34 HOH HOH . 
G 4 HOH A 23 349 35 HOH HOH . 
G 4 HOH A 24 350 36 HOH HOH . 
G 4 HOH A 25 351 37 HOH HOH . 
G 4 HOH A 26 352 38 HOH HOH . 
G 4 HOH A 27 353 40 HOH HOH . 
G 4 HOH A 28 354 41 HOH HOH . 
G 4 HOH A 29 355 42 HOH HOH . 
G 4 HOH A 30 356 44 HOH HOH . 
G 4 HOH A 31 357 49 HOH HOH . 
G 4 HOH A 32 358 51 HOH HOH . 
G 4 HOH A 33 359 52 HOH HOH . 
G 4 HOH A 34 360 54 HOH HOH . 
G 4 HOH A 35 361 58 HOH HOH . 
G 4 HOH A 36 362 63 HOH HOH . 
G 4 HOH A 37 363 67 HOH HOH . 
G 4 HOH A 38 364 71 HOH HOH . 
G 4 HOH A 39 365 79 HOH HOH . 
G 4 HOH A 40 366 80 HOH HOH . 
G 4 HOH A 41 368 82 HOH HOH . 
G 4 HOH A 42 369 84 HOH HOH . 
G 4 HOH A 43 370 90 HOH HOH . 
G 4 HOH A 44 371 95 HOH HOH . 
G 4 HOH A 45 372 102 HOH HOH . 
G 4 HOH A 46 373 103 HOH HOH . 
G 4 HOH A 47 374 105 HOH HOH . 
G 4 HOH A 48 375 110 HOH HOH . 
G 4 HOH A 49 376 112 HOH HOH . 
G 4 HOH A 50 377 113 HOH HOH . 
G 4 HOH A 51 378 114 HOH HOH . 
G 4 HOH A 52 379 116 HOH HOH . 
G 4 HOH A 53 380 119 HOH HOH . 
G 4 HOH A 54 381 121 HOH HOH . 
G 4 HOH A 55 382 123 HOH HOH . 
G 4 HOH A 56 383 125 HOH HOH . 
G 4 HOH A 57 384 127 HOH HOH . 
G 4 HOH A 58 385 133 HOH HOH . 
G 4 HOH A 59 386 137 HOH HOH . 
G 4 HOH A 60 387 142 HOH HOH . 
G 4 HOH A 61 388 150 HOH HOH . 
G 4 HOH A 62 389 152 HOH HOH . 
G 4 HOH A 63 390 155 HOH HOH . 
H 4 HOH B 1 328 2 HOH HOH . 
H 4 HOH B 2 329 4 HOH HOH . 
H 4 HOH B 3 330 7 HOH HOH . 
H 4 HOH B 4 331 9 HOH HOH . 
H 4 HOH B 5 332 12 HOH HOH . 
H 4 HOH B 6 333 14 HOH HOH . 
H 4 HOH B 7 334 15 HOH HOH . 
H 4 HOH B 8 335 20 HOH HOH . 
H 4 HOH B 9 336 24 HOH HOH . 
H 4 HOH B 10 337 31 HOH HOH . 
H 4 HOH B 11 338 39 HOH HOH . 
H 4 HOH B 12 339 45 HOH HOH . 
H 4 HOH B 13 340 46 HOH HOH . 
H 4 HOH B 14 341 47 HOH HOH . 
H 4 HOH B 15 342 48 HOH HOH . 
H 4 HOH B 16 343 50 HOH HOH . 
H 4 HOH B 17 344 53 HOH HOH . 
H 4 HOH B 18 345 55 HOH HOH . 
H 4 HOH B 19 346 56 HOH HOH . 
H 4 HOH B 20 347 59 HOH HOH . 
H 4 HOH B 21 348 62 HOH HOH . 
H 4 HOH B 22 349 64 HOH HOH . 
H 4 HOH B 23 350 65 HOH HOH . 
H 4 HOH B 24 351 66 HOH HOH . 
H 4 HOH B 25 352 68 HOH HOH . 
H 4 HOH B 26 353 69 HOH HOH . 
H 4 HOH B 27 354 73 HOH HOH . 
H 4 HOH B 28 355 74 HOH HOH . 
H 4 HOH B 29 356 75 HOH HOH . 
H 4 HOH B 30 357 77 HOH HOH . 
H 4 HOH B 31 358 83 HOH HOH . 
H 4 HOH B 32 359 87 HOH HOH . 
H 4 HOH B 33 360 88 HOH HOH . 
H 4 HOH B 34 361 89 HOH HOH . 
H 4 HOH B 35 362 92 HOH HOH . 
H 4 HOH B 36 363 93 HOH HOH . 
H 4 HOH B 37 364 97 HOH HOH . 
H 4 HOH B 38 365 99 HOH HOH . 
H 4 HOH B 39 366 101 HOH HOH . 
H 4 HOH B 40 368 104 HOH HOH . 
H 4 HOH B 41 369 106 HOH HOH . 
H 4 HOH B 42 370 107 HOH HOH . 
H 4 HOH B 43 371 108 HOH HOH . 
H 4 HOH B 44 372 111 HOH HOH . 
H 4 HOH B 45 373 115 HOH HOH . 
H 4 HOH B 46 374 118 HOH HOH . 
H 4 HOH B 47 375 128 HOH HOH . 
H 4 HOH B 48 376 129 HOH HOH . 
H 4 HOH B 49 377 130 HOH HOH . 
H 4 HOH B 50 378 134 HOH HOH . 
H 4 HOH B 51 379 135 HOH HOH . 
H 4 HOH B 52 380 136 HOH HOH . 
H 4 HOH B 53 381 147 HOH HOH . 
H 4 HOH B 54 382 148 HOH HOH . 
H 4 HOH B 55 383 149 HOH HOH . 
H 4 HOH B 56 384 154 HOH HOH . 
H 4 HOH B 57 385 158 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . E 2 -21.665 -76.844 -8.506 1 96.07 ? C1 NAG 367 B 1 
HETATM 2 C C2 NAG . . . E 2 -21.166 -78.316 -8.337 1 97.9 ? C2 NAG 367 B 1 
HETATM 3 C C3 NAG . . . E 2 -22.386 -79.294 -8.176 1 99.41 ? C3 NAG 367 B 1 
HETATM 4 C C4 NAG . . . E 2 -23.374 -78.824 -7.055 1 100.01 ? C4 NAG 367 B 1 
HETATM 5 C C5 NAG . . . E 2 -23.762 -77.325 -7.243 1 99.19 ? C5 NAG 367 B 1 
HETATM 6 C C6 NAG . . . E 2 -24.495 -76.74 -6.001 1 100.3 ? C6 NAG 367 B 1 
HETATM 7 C C7 NAG . . . E 2 -18.771 -78.649 -9.081 1 100.34 ? C7 NAG 367 B 1 
HETATM 8 C C8 NAG . . . E 2 -17.911 -79.133 -10.218 1 101.11 ? C8 NAG 367 B 1 
HETATM 9 N N2 NAG . . . E 2 -20.129 -78.736 -9.319 1 98.88 ? N2 NAG 367 B 1 
HETATM 10 O O3 NAG . . . E 2 -21.917 -80.654 -7.947 1 101.46 ? O3 NAG 367 B 1 
HETATM 11 O O4 NAG . . . E 2 -24.598 -79.635 -6.978 1 102.36 ? O4 NAG 367 B 1 
HETATM 12 O O5 NAG . . . E 2 -22.589 -76.493 -7.457 1 97.49 ? O5 NAG 367 B 1 
HETATM 13 O O6 NAG . . . E 2 -25.912 -76.872 -6.094 1 102.25 ? O6 NAG 367 B 1 
HETATM 14 O O7 NAG . . . E 2 -18.27 -78.218 -8.037 1 102.29 ? O7 NAG 367 B 1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           14 
#