data_3OPE # _model_server_result.job_id xYcuF0mLfQ831K6L8ldC-w _model_server_result.datetime_utc '2024-11-21 17:39:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ope # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":5}' # _entry.id 3OPE # _exptl.entry_id 3OPE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3OPE _cell.length_a 59.53 _cell.length_b 59.53 _cell.length_c 233.804 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OPE _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C ZN ZN . A ZN 1 1_555 A SG CYS 154 A CYS 2220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc2 C ZN ZN . A ZN 1 1_555 A SG CYS 202 A CYS 2268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc3 C ZN ZN . A ZN 1 1_555 A SG CYS 204 A CYS 2270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc4 C ZN ZN . A ZN 1 1_555 A SG CYS 209 A CYS 2275 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc5 D ZN ZN . A ZN 2 1_555 A SG CYS 51 A CYS 2117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc6 D ZN ZN . A ZN 2 1_555 A SG CYS 56 A CYS 2122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc7 D ZN ZN . A ZN 2 1_555 A SG CYS 62 A CYS 2128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.67 ? metalc ? metalc8 E ZN ZN . A ZN 4 1_555 A SG CYS 25 A CYS 2091 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc9 E ZN ZN . A ZN 4 1_555 A SG CYS 27 A CYS 2093 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc10 E ZN ZN . A ZN 4 1_555 A SG CYS 38 A CYS 2104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc11 E ZN ZN . A ZN 4 1_555 A SG CYS 42 A CYS 2108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.847 ? metalc ? metalc12 G ZN ZN . B ZN 3 1_555 B SG CYS 154 B CYS 2220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc13 G ZN ZN . B ZN 3 1_555 B SG CYS 202 B CYS 2268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.945 ? metalc ? metalc14 H ZN ZN . B ZN 5 1_555 B SG CYS 51 B CYS 2117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? metalc ? metalc15 H ZN ZN . B ZN 5 1_555 B SG CYS 56 B CYS 2122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc16 H ZN ZN . B ZN 5 1_555 B SG CYS 62 B CYS 2128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc17 I ZN ZN . B ZN 6 1_555 B SG CYS 38 B CYS 2104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? metalc ? metalc18 I ZN ZN . B ZN 6 1_555 B SG CYS 42 B CYS 2108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3OPE _atom_sites.fract_transf_matrix[1][1] 0.016798 _atom_sites.fract_transf_matrix[1][2] 0.009698 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019397 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004277 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 1 1 ZN ZN . D 2 ZN A 1 2 2 ZN ZN . E 2 ZN A 1 4 4 ZN ZN . F 3 SAM A 1 7 7 SAM SAM . G 2 ZN B 1 3 3 ZN ZN . H 2 ZN B 1 5 5 ZN ZN . I 2 ZN B 1 6 6 ZN ZN . J 3 SAM B 1 8 8 SAM SAM . K 4 HOH A 1 3 3 HOH WAT . K 4 HOH A 2 8 8 HOH WAT . K 4 HOH A 3 10 10 HOH WAT . K 4 HOH A 4 11 11 HOH WAT . K 4 HOH A 5 12 12 HOH WAT . K 4 HOH A 6 13 13 HOH WAT . K 4 HOH A 7 14 14 HOH WAT . K 4 HOH A 8 15 15 HOH WAT . K 4 HOH A 9 19 19 HOH WAT . K 4 HOH A 10 22 22 HOH WAT . K 4 HOH A 11 23 23 HOH WAT . K 4 HOH A 12 2289 4 HOH WAT . L 4 HOH B 1 1 1 HOH WAT . L 4 HOH B 2 2 2 HOH WAT . L 4 HOH B 3 7 7 HOH WAT . L 4 HOH B 4 9 9 HOH WAT . L 4 HOH B 5 16 16 HOH WAT . L 4 HOH B 6 17 17 HOH WAT . L 4 HOH B 7 18 18 HOH WAT . L 4 HOH B 8 20 20 HOH WAT . L 4 HOH B 9 21 21 HOH WAT . L 4 HOH B 10 24 24 HOH WAT . L 4 HOH B 11 25 25 HOH WAT . L 4 HOH B 12 26 26 HOH WAT . L 4 HOH B 13 27 27 HOH WAT . L 4 HOH B 14 2289 5 HOH WAT . L 4 HOH B 15 2290 6 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x -54.113 _atom_site.Cartn_y 27.734 _atom_site.Cartn_z 21.43 _atom_site.occupancy 0.51 _atom_site.B_iso_or_equiv 81.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 5 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #