data_3OQK
#
_model_server_result.job_id            xcriJvk8WnbgcKAjQWWA1w 
_model_server_result.datetime_utc      '2024-12-21 16:16:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3oqk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":367}' 
#
_entry.id    3OQK 
#
_exptl.entry_id    3OQK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3OQK 
_cell.length_a            141.387 
_cell.length_b            141.387 
_cell.length_c            141.387 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OQK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        198 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,H 1 1 
B,E,F,G,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 51 A CYS 45 1_555 A SG CYS 58 A CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
disulf ? disulf2 A SG CYS 217 A CYS 206 1_555 A SG CYS 221 A CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 A SG CYS 259 A CYS 249 1_555 A SG CYS 296 A CYS 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf4 B SG CYS 51 B CYS 45 1_555 B SG CYS 58 B CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
disulf ? disulf5 B SG CYS 217 B CYS 206 1_555 B SG CYS 221 B CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf6 B SG CYS 259 B CYS 249 1_555 B SG CYS 296 B CYS 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
covale ? covale1 A ND2 ASN 75 A ASN 67 1_555 C C1 NAG . A NAG 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.467 ? 
covale ? covale2 B ND2 ASN 75 B ASN 67 1_555 E C1 NAG . B NAG 367 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.472 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 250 n n 
C1 O1 NAG sing 251 n n 
C1 O5 NAG sing 252 n n 
C1 H1 NAG sing 253 n n 
C2 C3 NAG sing 254 n n 
C2 N2 NAG sing 255 n n 
C2 H2 NAG sing 256 n n 
C3 C4 NAG sing 257 n n 
C3 O3 NAG sing 258 n n 
C3 H3 NAG sing 259 n n 
C4 C5 NAG sing 260 n n 
C4 O4 NAG sing 261 n n 
C4 H4 NAG sing 262 n n 
C5 C6 NAG sing 263 n n 
C5 O5 NAG sing 264 n n 
C5 H5 NAG sing 265 n n 
C6 O6 NAG sing 266 n n 
C6 H61 NAG sing 267 n n 
C6 H62 NAG sing 268 n n 
C7 C8 NAG sing 269 n n 
C7 N2 NAG sing 270 n n 
C7 O7 NAG doub 271 n n 
C8 H81 NAG sing 272 n n 
C8 H82 NAG sing 273 n n 
C8 H83 NAG sing 274 n n 
N2 HN2 NAG sing 275 n n 
O1 HO1 NAG sing 276 n n 
O3 HO3 NAG sing 277 n n 
O4 HO4 NAG sing 278 n n 
O6 HO6 NAG sing 279 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     3OQK 
_atom_sites.fract_transf_matrix[1][1]    0.007073 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007073 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007073 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAG A 1 367 367 NAG NAG . 
D 3 S52 A 1 327 327 S52 S52 . 
E 2 NAG B 1 367 367 NAG NAG . 
F 3 S52 B 1 327 327 S52 S52 . 
G 4 GOL B 1 328 328 GOL GOL . 
H 5 HOH A 1 328 328 HOH HOH . 
H 5 HOH A 2 329 329 HOH HOH . 
H 5 HOH A 3 330 330 HOH HOH . 
H 5 HOH A 4 331 331 HOH HOH . 
H 5 HOH A 5 332 332 HOH HOH . 
H 5 HOH A 6 333 333 HOH HOH . 
H 5 HOH A 7 334 334 HOH HOH . 
H 5 HOH A 8 335 335 HOH HOH . 
H 5 HOH A 9 336 336 HOH HOH . 
H 5 HOH A 10 337 337 HOH HOH . 
H 5 HOH A 11 338 338 HOH HOH . 
H 5 HOH A 12 339 339 HOH HOH . 
H 5 HOH A 13 340 340 HOH HOH . 
H 5 HOH A 14 341 341 HOH HOH . 
H 5 HOH A 15 342 342 HOH HOH . 
H 5 HOH A 16 343 343 HOH HOH . 
H 5 HOH A 17 344 344 HOH HOH . 
H 5 HOH A 18 345 345 HOH HOH . 
H 5 HOH A 19 346 346 HOH HOH . 
H 5 HOH A 20 347 347 HOH HOH . 
H 5 HOH A 21 348 348 HOH HOH . 
H 5 HOH A 22 349 349 HOH HOH . 
H 5 HOH A 23 350 350 HOH HOH . 
H 5 HOH A 24 351 351 HOH HOH . 
H 5 HOH A 25 352 352 HOH HOH . 
H 5 HOH A 26 353 353 HOH HOH . 
H 5 HOH A 27 354 354 HOH HOH . 
H 5 HOH A 28 355 355 HOH HOH . 
H 5 HOH A 29 356 356 HOH HOH . 
H 5 HOH A 30 357 357 HOH HOH . 
H 5 HOH A 31 358 358 HOH HOH . 
H 5 HOH A 32 359 359 HOH HOH . 
H 5 HOH A 33 360 360 HOH HOH . 
H 5 HOH A 34 361 361 HOH HOH . 
H 5 HOH A 35 362 362 HOH HOH . 
H 5 HOH A 36 363 363 HOH HOH . 
H 5 HOH A 37 364 364 HOH HOH . 
H 5 HOH A 38 365 365 HOH HOH . 
H 5 HOH A 39 366 366 HOH HOH . 
H 5 HOH A 40 368 368 HOH HOH . 
H 5 HOH A 41 369 369 HOH HOH . 
H 5 HOH A 42 370 370 HOH HOH . 
H 5 HOH A 43 371 371 HOH HOH . 
H 5 HOH A 44 372 372 HOH HOH . 
H 5 HOH A 45 373 373 HOH HOH . 
H 5 HOH A 46 374 374 HOH HOH . 
H 5 HOH A 47 375 375 HOH HOH . 
H 5 HOH A 48 376 376 HOH HOH . 
H 5 HOH A 49 377 377 HOH HOH . 
H 5 HOH A 50 378 378 HOH HOH . 
H 5 HOH A 51 379 379 HOH HOH . 
H 5 HOH A 52 380 380 HOH HOH . 
H 5 HOH A 53 381 381 HOH HOH . 
H 5 HOH A 54 382 382 HOH HOH . 
H 5 HOH A 55 383 383 HOH HOH . 
H 5 HOH A 56 384 384 HOH HOH . 
H 5 HOH A 57 385 385 HOH HOH . 
H 5 HOH A 58 386 386 HOH HOH . 
H 5 HOH A 59 387 387 HOH HOH . 
H 5 HOH A 60 388 388 HOH HOH . 
H 5 HOH A 61 389 389 HOH HOH . 
H 5 HOH A 62 390 390 HOH HOH . 
H 5 HOH A 63 391 391 HOH HOH . 
H 5 HOH A 64 392 392 HOH HOH . 
H 5 HOH A 65 393 393 HOH HOH . 
H 5 HOH A 66 394 394 HOH HOH . 
H 5 HOH A 67 395 395 HOH HOH . 
H 5 HOH A 68 396 396 HOH HOH . 
H 5 HOH A 69 397 397 HOH HOH . 
H 5 HOH A 70 398 398 HOH HOH . 
H 5 HOH A 71 399 399 HOH HOH . 
H 5 HOH A 72 400 400 HOH HOH . 
H 5 HOH A 73 401 401 HOH HOH . 
H 5 HOH A 74 402 402 HOH HOH . 
H 5 HOH A 75 403 403 HOH HOH . 
H 5 HOH A 76 404 404 HOH HOH . 
H 5 HOH A 77 405 405 HOH HOH . 
H 5 HOH A 78 406 406 HOH HOH . 
H 5 HOH A 79 407 407 HOH HOH . 
H 5 HOH A 80 408 408 HOH HOH . 
H 5 HOH A 81 409 409 HOH HOH . 
H 5 HOH A 82 410 410 HOH HOH . 
H 5 HOH A 83 411 411 HOH HOH . 
H 5 HOH A 84 412 412 HOH HOH . 
H 5 HOH A 85 413 413 HOH HOH . 
I 5 HOH B 1 329 329 HOH HOH . 
I 5 HOH B 2 330 330 HOH HOH . 
I 5 HOH B 3 331 331 HOH HOH . 
I 5 HOH B 4 332 332 HOH HOH . 
I 5 HOH B 5 333 333 HOH HOH . 
I 5 HOH B 6 334 334 HOH HOH . 
I 5 HOH B 7 335 335 HOH HOH . 
I 5 HOH B 8 336 336 HOH HOH . 
I 5 HOH B 9 337 337 HOH HOH . 
I 5 HOH B 10 338 338 HOH HOH . 
I 5 HOH B 11 339 339 HOH HOH . 
I 5 HOH B 12 340 340 HOH HOH . 
I 5 HOH B 13 341 341 HOH HOH . 
I 5 HOH B 14 342 342 HOH HOH . 
I 5 HOH B 15 343 343 HOH HOH . 
I 5 HOH B 16 344 344 HOH HOH . 
I 5 HOH B 17 345 345 HOH HOH . 
I 5 HOH B 18 346 346 HOH HOH . 
I 5 HOH B 19 347 347 HOH HOH . 
I 5 HOH B 20 348 348 HOH HOH . 
I 5 HOH B 21 349 349 HOH HOH . 
I 5 HOH B 22 350 350 HOH HOH . 
I 5 HOH B 23 351 351 HOH HOH . 
I 5 HOH B 24 352 352 HOH HOH . 
I 5 HOH B 25 353 353 HOH HOH . 
I 5 HOH B 26 354 354 HOH HOH . 
I 5 HOH B 27 355 355 HOH HOH . 
I 5 HOH B 28 356 356 HOH HOH . 
I 5 HOH B 29 357 357 HOH HOH . 
I 5 HOH B 30 358 358 HOH HOH . 
I 5 HOH B 31 359 359 HOH HOH . 
I 5 HOH B 32 360 360 HOH HOH . 
I 5 HOH B 33 361 361 HOH HOH . 
I 5 HOH B 34 362 362 HOH HOH . 
I 5 HOH B 35 363 363 HOH HOH . 
I 5 HOH B 36 364 364 HOH HOH . 
I 5 HOH B 37 365 365 HOH HOH . 
I 5 HOH B 38 366 366 HOH HOH . 
I 5 HOH B 39 368 368 HOH HOH . 
I 5 HOH B 40 369 369 HOH HOH . 
I 5 HOH B 41 370 370 HOH HOH . 
I 5 HOH B 42 371 371 HOH HOH . 
I 5 HOH B 43 372 372 HOH HOH . 
I 5 HOH B 44 373 373 HOH HOH . 
I 5 HOH B 45 374 374 HOH HOH . 
I 5 HOH B 46 375 375 HOH HOH . 
I 5 HOH B 47 376 376 HOH HOH . 
I 5 HOH B 48 377 377 HOH HOH . 
I 5 HOH B 49 378 378 HOH HOH . 
I 5 HOH B 50 379 379 HOH HOH . 
I 5 HOH B 51 380 380 HOH HOH . 
I 5 HOH B 52 381 381 HOH HOH . 
I 5 HOH B 53 382 382 HOH HOH . 
I 5 HOH B 54 383 383 HOH HOH . 
I 5 HOH B 55 384 384 HOH HOH . 
I 5 HOH B 56 385 385 HOH HOH . 
I 5 HOH B 57 386 386 HOH HOH . 
I 5 HOH B 58 387 387 HOH HOH . 
I 5 HOH B 59 388 388 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . C 2 -1.215 -11.805 22.258 1 102.69 ? C1 NAG 367 A 1 
HETATM 2 C C2 NAG . . . C 2 -0.405 -11.013 23.261 1 104.37 ? C2 NAG 367 A 1 
HETATM 3 C C3 NAG . . . C 2 0.831 -11.863 23.549 1 106.03 ? C3 NAG 367 A 1 
HETATM 4 C C4 NAG . . . C 2 0.33 -13.15 24.273 1 106.69 ? C4 NAG 367 A 1 
HETATM 5 C C5 NAG . . . C 2 -0.549 -13.951 23.336 1 105.86 ? C5 NAG 367 A 1 
HETATM 6 C C6 NAG . . . C 2 -1.228 -15.047 24.224 1 107.17 ? C6 NAG 367 A 1 
HETATM 7 C C7 NAG . . . C 2 -0.71 -8.531 23.351 1 106.47 ? C7 NAG 367 A 1 
HETATM 8 C C8 NAG . . . C 2 -0.052 -7.264 22.846 1 107.23 ? C8 NAG 367 A 1 
HETATM 9 N N2 NAG . . . C 2 -0.041 -9.659 22.905 1 105.11 ? N2 NAG 367 A 1 
HETATM 10 O O3 NAG . . . C 2 1.799 -11.149 24.356 1 108.29 ? O3 NAG 367 A 1 
HETATM 11 O O4 NAG . . . C 2 1.384 -13.927 24.818 1 109.42 ? O4 NAG 367 A 1 
HETATM 12 O O5 NAG . . . C 2 -1.582 -13.108 22.748 1 104.15 ? O5 NAG 367 A 1 
HETATM 13 O O6 NAG . . . C 2 -1.888 -16.03 23.449 1 109.54 ? O6 NAG 367 A 1 
HETATM 14 O O7 NAG . . . C 2 -1.733 -8.507 24.077 1 108.2 ? O7 NAG 367 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           408 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           14 
#