data_3OS3 # _model_server_result.job_id '_Cz06Axh3U1Dzdle2DlByg' _model_server_result.datetime_utc '2025-02-18 16:12:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3os3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":400}' # _entry.id 3OS3 # _exptl.entry_id 3OS3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 437.369 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[(4-ethynyl-2-fluorophenyl)amino]-3,4-difluoro-N-(2-hydroxyethoxy)-5-{[(2-hydroxyethoxy)imino]methyl}benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3OS3 _cell.length_a 72.998 _cell.length_b 72.998 _cell.length_c 131.505 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OS3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O2A ATP . A ATP 1 1_555 D MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc2 B O2B ATP . A ATP 1 1_555 D MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc3 A OD1 ASN 135 A ASN 195 1_555 D MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? metalc ? metalc4 A OD2 ASP 148 A ASP 208 1_555 D MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? # _chem_comp.formula 'C20 H18 F3 N3 O5' _chem_comp.formula_weight 437.369 _chem_comp.id 3OS _chem_comp.mon_nstd_flag . _chem_comp.name 2-[(4-ethynyl-2-fluorophenyl)amino]-3,4-difluoro-N-(2-hydroxyethoxy)-5-{[(2-hydroxyethoxy)imino]methyl}benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C5 3OS sing 1 n y C5 C6 3OS doub 2 n y C5 H5 3OS sing 3 n n C6 C19 3OS sing 4 n n C7 C6 3OS sing 5 n y C7 F8 3OS sing 6 n n C13 C12 3OS sing 7 n y C15 C14 3OS trip 8 n n C15 H15 3OS sing 9 n n C17 C3 3OS doub 10 n y C22 C23 3OS sing 11 n n C22 H22 3OS sing 12 n n C22 H22A 3OS sing 13 n n C1 C4 3OS doub 14 n y C1 C9 3OS sing 15 n y N2 C1 3OS sing 16 n n N2 HN2 3OS sing 17 n n C3 N2 3OS sing 18 n n C3 C11 3OS sing 19 n y C9 C7 3OS doub 20 n y F10 C9 3OS sing 21 n n C11 H11 3OS sing 22 n n C12 C11 3OS doub 23 n y C12 H12 3OS sing 24 n n C14 C13 3OS sing 25 n n C16 C13 3OS doub 26 n y C16 C17 3OS sing 27 n y C16 H16 3OS sing 28 n n F18 C17 3OS sing 29 n n C19 N20 3OS doub 30 e n C19 H19 3OS sing 31 n n N20 O21 3OS sing 32 n n O21 C22 3OS sing 33 n n C23 O24 3OS sing 34 n n C23 H23 3OS sing 35 n n C23 H23A 3OS sing 36 n n O24 HO24 3OS sing 37 n n C25 C4 3OS sing 38 n n C25 N27 3OS sing 39 n n O26 C25 3OS doub 40 n n N27 HN27 3OS sing 41 n n O28 N27 3OS sing 42 n n C29 O28 3OS sing 43 n n C29 H29 3OS sing 44 n n C29 H29A 3OS sing 45 n n C30 C29 3OS sing 46 n n C30 H30 3OS sing 47 n n C30 H30A 3OS sing 48 n n O31 C30 3OS sing 49 n n O31 HO31 3OS sing 50 n n # _atom_sites.entry_id 3OS3 _atom_sites.fract_transf_matrix[1][1] 0.013699 _atom_sites.fract_transf_matrix[1][2] 0.007909 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015818 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007604 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ATP A 1 1 1 ATP ATP . C 3 3OS A 1 400 400 3OS 3OS . D 4 MG A 1 401 401 MG MG . E 5 HOH A 1 402 402 HOH HOH . E 5 HOH A 2 403 403 HOH HOH . E 5 HOH A 3 404 404 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 3OS . . . C 3 10.352 39.967 -4.033 1 57.67 ? C4 3OS 400 A 1 HETATM 2 C C5 3OS . . . C 3 10.801 39.192 -2.909 1 60.66 ? C5 3OS 400 A 1 HETATM 3 C C6 3OS . . . C 3 10.06 38.061 -2.488 1 61.14 ? C6 3OS 400 A 1 HETATM 4 C C7 3OS . . . C 3 8.89 37.703 -3.179 1 59.5 ? C7 3OS 400 A 1 HETATM 5 C C13 3OS . . . C 3 5.093 42.285 -7.038 1 43.66 ? C13 3OS 400 A 1 HETATM 6 C C15 3OS . . . C 3 2.889 43.446 -7.772 1 47.42 ? C15 3OS 400 A 1 HETATM 7 C C17 3OS . . . C 3 7.454 41.822 -7.359 1 47.32 ? C17 3OS 400 A 1 HETATM 8 C C22 3OS . . . C 3 12.497 38.33 1 1 74.3 ? C22 3OS 400 A 1 HETATM 9 C C1 3OS . . . C 3 9.159 39.608 -4.748 1 56.22 ? C1 3OS 400 A 1 HETATM 10 N N2 3OS . . . C 3 8.735 40.384 -5.87 1 50.41 ? N2 3OS 400 A 1 HETATM 11 C C3 3OS . . . C 3 7.493 40.988 -6.211 1 47.26 ? C3 3OS 400 A 1 HETATM 12 F F8 3OS . . . C 3 8.176 36.649 -2.808 1 59.95 ? F8 3OS 400 A 1 HETATM 13 C C9 3OS . . . C 3 8.452 38.459 -4.282 1 57.49 ? C9 3OS 400 A 1 HETATM 14 F F10 3OS . . . C 3 7.35 38.069 -4.901 1 57.1 ? F10 3OS 400 A 1 HETATM 15 C C11 3OS . . . C 3 6.277 40.833 -5.48 1 45.26 ? C11 3OS 400 A 1 HETATM 16 C C12 3OS . . . C 3 5.089 41.469 -5.891 1 41.91 ? C12 3OS 400 A 1 HETATM 17 C C14 3OS . . . C 3 3.903 42.918 -7.44 1 44.22 ? C14 3OS 400 A 1 HETATM 18 C C16 3OS . . . C 3 6.271 42.463 -7.785 1 43.71 ? C16 3OS 400 A 1 HETATM 19 F F18 3OS . . . C 3 8.565 41.996 -8.069 1 48.42 ? F18 3OS 400 A 1 HETATM 20 C C19 3OS . . . C 3 10.498 37.242 -1.353 1 64.45 ? C19 3OS 400 A 1 HETATM 21 N N20 3OS . . . C 3 10.583 37.675 -0.134 1 70.79 ? N20 3OS 400 A 1 HETATM 22 O O21 3OS . . . C 3 11.796 37.198 0.431 1 72.86 ? O21 3OS 400 A 1 HETATM 23 C C23 3OS . . . C 3 11.793 38.788 2.264 1 74.41 ? C23 3OS 400 A 1 HETATM 24 O O24 3OS . . . C 3 12.324 38.048 3.364 1 78.44 ? O24 3OS 400 A 1 HETATM 25 C C25 3OS . . . C 3 11.169 41.133 -4.443 1 57.45 ? C25 3OS 400 A 1 HETATM 26 O O26 3OS . . . C 3 11.033 41.548 -5.592 1 57.64 ? O26 3OS 400 A 1 HETATM 27 N N27 3OS . . . C 3 12.073 41.693 -3.545 1 59.09 ? N27 3OS 400 A 1 HETATM 28 O O28 3OS . . . C 3 13.053 42.613 -4.04 1 60.74 ? O28 3OS 400 A 1 HETATM 29 C C29 3OS . . . C 3 14.294 41.921 -4.056 1 59.32 ? C29 3OS 400 A 1 HETATM 30 C C30 3OS . . . C 3 14.633 41.627 -5.49 1 59.44 ? C30 3OS 400 A 1 HETATM 31 O O31 3OS . . . C 3 15.618 42.549 -5.889 1 63.15 ? O31 3OS 400 A 1 # _model_server_stats.io_time_ms 129 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #