data_3OT8
#
_model_server_result.job_id            i_5q8gjKffgwoOmPGsS_ug 
_model_server_result.datetime_utc      '2024-11-17 22:33:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ot8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":276}' 
#
_entry.id    3OT8 
#
_exptl.entry_id    3OT8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.78 
_cell.angle_gamma         90 
_cell.entry_id            3OT8 
_cell.length_a            44.78 
_cell.length_b            65.63 
_cell.length_c            57.64 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OT8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3OT8 
_atom_sites.fract_transf_matrix[1][1]    0.022331 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001867 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015237 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01741 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MI5 A 1 1 1 MI5 MI5 . 
C 3 GOL A 1 275 275 GOL GOL . 
D 3 GOL A 1 276 276 GOL GOL . 
E 3 GOL A 1 277 277 GOL GOL . 
F 4 HOH A 1 278 278 HOH HOH . 
F 4 HOH A 2 279 279 HOH HOH . 
F 4 HOH A 3 280 280 HOH HOH . 
F 4 HOH A 4 281 281 HOH HOH . 
F 4 HOH A 5 282 282 HOH HOH . 
F 4 HOH A 6 283 283 HOH HOH . 
F 4 HOH A 7 284 284 HOH HOH . 
F 4 HOH A 8 285 285 HOH HOH . 
F 4 HOH A 9 286 286 HOH HOH . 
F 4 HOH A 10 287 287 HOH HOH . 
F 4 HOH A 11 288 288 HOH HOH . 
F 4 HOH A 12 289 289 HOH HOH . 
F 4 HOH A 13 290 290 HOH HOH . 
F 4 HOH A 14 291 291 HOH HOH . 
F 4 HOH A 15 292 292 HOH HOH . 
F 4 HOH A 16 293 293 HOH HOH . 
F 4 HOH A 17 294 294 HOH HOH . 
F 4 HOH A 18 295 295 HOH HOH . 
F 4 HOH A 19 296 296 HOH HOH . 
F 4 HOH A 20 297 297 HOH HOH . 
F 4 HOH A 21 298 298 HOH HOH . 
F 4 HOH A 22 299 299 HOH HOH . 
F 4 HOH A 23 300 300 HOH HOH . 
F 4 HOH A 24 301 301 HOH HOH . 
F 4 HOH A 25 302 302 HOH HOH . 
F 4 HOH A 26 303 303 HOH HOH . 
F 4 HOH A 27 304 304 HOH HOH . 
F 4 HOH A 28 305 305 HOH HOH . 
F 4 HOH A 29 306 306 HOH HOH . 
F 4 HOH A 30 307 307 HOH HOH . 
F 4 HOH A 31 308 308 HOH HOH . 
F 4 HOH A 32 309 309 HOH HOH . 
F 4 HOH A 33 310 310 HOH HOH . 
F 4 HOH A 34 311 311 HOH HOH . 
F 4 HOH A 35 312 312 HOH HOH . 
F 4 HOH A 36 313 313 HOH HOH . 
F 4 HOH A 37 314 314 HOH HOH . 
F 4 HOH A 38 315 315 HOH HOH . 
F 4 HOH A 39 316 316 HOH HOH . 
F 4 HOH A 40 317 317 HOH HOH . 
F 4 HOH A 41 318 318 HOH HOH . 
F 4 HOH A 42 319 319 HOH HOH . 
F 4 HOH A 43 320 320 HOH HOH . 
F 4 HOH A 44 321 321 HOH HOH . 
F 4 HOH A 45 322 322 HOH HOH . 
F 4 HOH A 46 323 323 HOH HOH . 
F 4 HOH A 47 324 324 HOH HOH . 
F 4 HOH A 48 325 325 HOH HOH . 
F 4 HOH A 49 326 326 HOH HOH . 
F 4 HOH A 50 327 327 HOH HOH . 
F 4 HOH A 51 328 328 HOH HOH . 
F 4 HOH A 52 329 329 HOH HOH . 
F 4 HOH A 53 330 330 HOH HOH . 
F 4 HOH A 54 331 331 HOH HOH . 
F 4 HOH A 55 332 332 HOH HOH . 
F 4 HOH A 56 333 333 HOH HOH . 
F 4 HOH A 57 334 334 HOH HOH . 
F 4 HOH A 58 335 335 HOH HOH . 
F 4 HOH A 59 336 336 HOH HOH . 
F 4 HOH A 60 337 337 HOH HOH . 
F 4 HOH A 61 338 338 HOH HOH . 
F 4 HOH A 62 339 339 HOH HOH . 
F 4 HOH A 63 340 340 HOH HOH . 
F 4 HOH A 64 341 341 HOH HOH . 
F 4 HOH A 65 342 342 HOH HOH . 
F 4 HOH A 66 343 343 HOH HOH . 
F 4 HOH A 67 344 344 HOH HOH . 
F 4 HOH A 68 345 345 HOH HOH . 
F 4 HOH A 69 346 346 HOH HOH . 
F 4 HOH A 70 347 347 HOH HOH . 
F 4 HOH A 71 348 348 HOH HOH . 
F 4 HOH A 72 349 349 HOH HOH . 
F 4 HOH A 73 350 350 HOH HOH . 
F 4 HOH A 74 351 351 HOH HOH . 
F 4 HOH A 75 352 352 HOH HOH . 
F 4 HOH A 76 353 353 HOH HOH . 
F 4 HOH A 77 354 354 HOH HOH . 
F 4 HOH A 78 355 355 HOH HOH . 
F 4 HOH A 79 356 356 HOH HOH . 
F 4 HOH A 80 357 357 HOH HOH . 
F 4 HOH A 81 358 358 HOH HOH . 
F 4 HOH A 82 359 359 HOH HOH . 
F 4 HOH A 83 360 360 HOH HOH . 
F 4 HOH A 84 361 361 HOH HOH . 
F 4 HOH A 85 362 362 HOH HOH . 
F 4 HOH A 86 363 363 HOH HOH . 
F 4 HOH A 87 364 364 HOH HOH . 
F 4 HOH A 88 365 365 HOH HOH . 
F 4 HOH A 89 366 366 HOH HOH . 
F 4 HOH A 90 367 367 HOH HOH . 
F 4 HOH A 91 368 368 HOH HOH . 
F 4 HOH A 92 369 369 HOH HOH . 
F 4 HOH A 93 370 370 HOH HOH . 
F 4 HOH A 94 371 371 HOH HOH . 
F 4 HOH A 95 372 372 HOH HOH . 
F 4 HOH A 96 373 373 HOH HOH . 
F 4 HOH A 97 374 374 HOH HOH . 
F 4 HOH A 98 375 375 HOH HOH . 
F 4 HOH A 99 376 376 HOH HOH . 
F 4 HOH A 100 377 377 HOH HOH . 
F 4 HOH A 101 378 378 HOH HOH . 
F 4 HOH A 102 379 379 HOH HOH . 
F 4 HOH A 103 380 380 HOH HOH . 
F 4 HOH A 104 381 381 HOH HOH . 
F 4 HOH A 105 382 382 HOH HOH . 
F 4 HOH A 106 383 383 HOH HOH . 
F 4 HOH A 107 384 384 HOH HOH . 
F 4 HOH A 108 385 385 HOH HOH . 
F 4 HOH A 109 386 386 HOH HOH . 
F 4 HOH A 110 387 387 HOH HOH . 
F 4 HOH A 111 388 388 HOH HOH . 
F 4 HOH A 112 389 389 HOH HOH . 
F 4 HOH A 113 390 390 HOH HOH . 
F 4 HOH A 114 391 391 HOH HOH . 
F 4 HOH A 115 392 392 HOH HOH . 
F 4 HOH A 116 393 393 HOH HOH . 
F 4 HOH A 117 394 394 HOH HOH . 
F 4 HOH A 118 395 395 HOH HOH . 
F 4 HOH A 119 396 396 HOH HOH . 
F 4 HOH A 120 397 397 HOH HOH . 
F 4 HOH A 121 398 398 HOH HOH . 
F 4 HOH A 122 399 399 HOH HOH . 
F 4 HOH A 123 400 400 HOH HOH . 
F 4 HOH A 124 401 401 HOH HOH . 
F 4 HOH A 125 402 402 HOH HOH . 
F 4 HOH A 126 403 403 HOH HOH . 
F 4 HOH A 127 404 404 HOH HOH . 
F 4 HOH A 128 405 405 HOH HOH . 
F 4 HOH A 129 406 406 HOH HOH . 
F 4 HOH A 130 407 407 HOH HOH . 
F 4 HOH A 131 408 408 HOH HOH . 
F 4 HOH A 132 409 409 HOH HOH . 
F 4 HOH A 133 410 410 HOH HOH . 
F 4 HOH A 134 411 411 HOH HOH . 
F 4 HOH A 135 412 412 HOH HOH . 
F 4 HOH A 136 413 413 HOH HOH . 
F 4 HOH A 137 414 414 HOH HOH . 
F 4 HOH A 138 415 415 HOH HOH . 
F 4 HOH A 139 416 416 HOH HOH . 
F 4 HOH A 140 417 417 HOH HOH . 
F 4 HOH A 141 418 418 HOH HOH . 
F 4 HOH A 142 419 419 HOH HOH . 
F 4 HOH A 143 420 420 HOH HOH . 
F 4 HOH A 144 421 421 HOH HOH . 
F 4 HOH A 145 422 422 HOH HOH . 
F 4 HOH A 146 423 423 HOH HOH . 
F 4 HOH A 147 424 424 HOH HOH . 
F 4 HOH A 148 425 425 HOH HOH . 
F 4 HOH A 149 426 426 HOH HOH . 
F 4 HOH A 150 427 427 HOH HOH . 
F 4 HOH A 151 428 428 HOH HOH . 
F 4 HOH A 152 429 429 HOH HOH . 
F 4 HOH A 153 430 430 HOH HOH . 
F 4 HOH A 154 431 431 HOH HOH . 
F 4 HOH A 155 432 432 HOH HOH . 
F 4 HOH A 156 433 433 HOH HOH . 
F 4 HOH A 157 434 434 HOH HOH . 
F 4 HOH A 158 435 435 HOH HOH . 
F 4 HOH A 159 436 436 HOH HOH . 
F 4 HOH A 160 437 437 HOH HOH . 
F 4 HOH A 161 438 438 HOH HOH . 
F 4 HOH A 162 439 439 HOH HOH . 
F 4 HOH A 163 440 440 HOH HOH . 
F 4 HOH A 164 441 441 HOH HOH . 
F 4 HOH A 165 442 442 HOH HOH . 
F 4 HOH A 166 443 443 HOH HOH . 
F 4 HOH A 167 444 444 HOH HOH . 
F 4 HOH A 168 445 445 HOH HOH . 
F 4 HOH A 169 446 446 HOH HOH . 
F 4 HOH A 170 447 447 HOH HOH . 
F 4 HOH A 171 448 448 HOH HOH . 
F 4 HOH A 172 449 449 HOH HOH . 
F 4 HOH A 173 450 450 HOH HOH . 
F 4 HOH A 174 451 451 HOH HOH . 
F 4 HOH A 175 452 452 HOH HOH . 
F 4 HOH A 176 453 453 HOH HOH . 
F 4 HOH A 177 454 454 HOH HOH . 
F 4 HOH A 178 455 455 HOH HOH . 
F 4 HOH A 179 456 456 HOH HOH . 
F 4 HOH A 180 457 457 HOH HOH . 
F 4 HOH A 181 458 458 HOH HOH . 
F 4 HOH A 182 459 459 HOH HOH . 
F 4 HOH A 183 460 460 HOH HOH . 
F 4 HOH A 184 461 461 HOH HOH . 
F 4 HOH A 185 462 462 HOH HOH . 
F 4 HOH A 186 463 463 HOH HOH . 
F 4 HOH A 187 464 464 HOH HOH . 
F 4 HOH A 188 465 465 HOH HOH . 
F 4 HOH A 189 466 466 HOH HOH . 
F 4 HOH A 190 467 467 HOH HOH . 
F 4 HOH A 191 468 468 HOH HOH . 
F 4 HOH A 192 469 469 HOH HOH . 
F 4 HOH A 193 470 470 HOH HOH . 
F 4 HOH A 194 471 471 HOH HOH . 
F 4 HOH A 195 472 472 HOH HOH . 
F 4 HOH A 196 473 473 HOH HOH . 
F 4 HOH A 197 474 474 HOH HOH . 
F 4 HOH A 198 475 475 HOH HOH . 
F 4 HOH A 199 476 476 HOH HOH . 
F 4 HOH A 200 477 477 HOH HOH . 
F 4 HOH A 201 478 478 HOH HOH . 
F 4 HOH A 202 479 479 HOH HOH . 
F 4 HOH A 203 480 480 HOH HOH . 
F 4 HOH A 204 482 482 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 21.069 2.925 44.09 1 43.23 ? C1 GOL 276 A 1 
HETATM 2 O O1 GOL . . . D 3 20.423 4.011 44.596 1 44.33 ? O1 GOL 276 A 1 
HETATM 3 C C2 GOL . . . D 3 21.97 3.342 43.026 1 41.73 ? C2 GOL 276 A 1 
HETATM 4 O O2 GOL . . . D 3 23.243 3.656 43.468 1 43.67 ? O2 GOL 276 A 1 
HETATM 5 C C3 GOL . . . D 3 21.517 4.515 42.307 1 38.32 ? C3 GOL 276 A 1 
HETATM 6 O O3 GOL . . . D 3 22.052 5.751 42.586 1 37.15 ? O3 GOL 276 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           435 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#