data_3OW6 # _model_server_result.job_id BH6DwOcjAWMT9uDN9foIaQ _model_server_result.datetime_utc '2025-06-13 04:27:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ow6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3OW6 # _exptl.entry_id 3OW6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 242.23 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(2,4-dihydroxyphenyl)-1,3-dihydro-2H-benzimidazol-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3OW6 _cell.length_a 71.495 _cell.length_b 89.482 _cell.length_c 88.107 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OW6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H10 N2 O3' _chem_comp.formula_weight 242.23 _chem_comp.id MEX _chem_comp.mon_nstd_flag . _chem_comp.name 1-(2,4-dihydroxyphenyl)-1,3-dihydro-2H-benzimidazol-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 MEX doub 224 n y C1 C6 MEX sing 225 n y C1 H1 MEX sing 226 n n N9 C2 MEX sing 227 n n C2 C3 MEX sing 228 n y O8 C3 MEX sing 229 n n C3 C4 MEX doub 230 n y C4 C5 MEX sing 231 n y C4 H4 MEX sing 232 n n C6 C5 MEX doub 233 n y C5 O7 MEX sing 234 n n C6 H6 MEX sing 235 n n O7 HO7 MEX sing 236 n n O8 HO8 MEX sing 237 n n C13 N9 MEX sing 238 n n C10 N9 MEX sing 239 n n C11 C10 MEX doub 240 n y C10 C14 MEX sing 241 n y C17 C11 MEX sing 242 n y N12 C11 MEX sing 243 n n N12 C13 MEX sing 244 n n N12 HN12 MEX sing 245 n n O18 C13 MEX doub 246 n n C15 C14 MEX doub 247 n y C14 H14 MEX sing 248 n n C16 C15 MEX sing 249 n y C15 H15 MEX sing 250 n n C17 C16 MEX doub 251 n y C16 H16 MEX sing 252 n n C17 H17 MEX sing 253 n n # _atom_sites.entry_id 3OW6 _atom_sites.fract_transf_matrix[1][1] 0.013987 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011175 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01135 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MEX A 1 1 1 MEX MEX . C 3 HOH A 1 2 2 HOH HOH . C 3 HOH A 2 3 3 HOH HOH . C 3 HOH A 3 4 4 HOH HOH . C 3 HOH A 4 5 5 HOH HOH . C 3 HOH A 5 6 6 HOH HOH . C 3 HOH A 6 7 7 HOH HOH . C 3 HOH A 7 8 8 HOH HOH . C 3 HOH A 8 9 9 HOH HOH . C 3 HOH A 9 10 10 HOH HOH . C 3 HOH A 10 11 11 HOH HOH . C 3 HOH A 11 12 12 HOH HOH . C 3 HOH A 12 13 13 HOH HOH . C 3 HOH A 13 14 14 HOH HOH . C 3 HOH A 14 15 15 HOH HOH . C 3 HOH A 15 16 16 HOH HOH . C 3 HOH A 16 224 224 HOH HOH . C 3 HOH A 17 225 225 HOH HOH . C 3 HOH A 18 226 226 HOH HOH . C 3 HOH A 19 227 227 HOH HOH . C 3 HOH A 20 228 228 HOH HOH . C 3 HOH A 21 229 229 HOH HOH . C 3 HOH A 22 230 230 HOH HOH . C 3 HOH A 23 231 231 HOH HOH . C 3 HOH A 24 232 232 HOH HOH . C 3 HOH A 25 233 233 HOH HOH . C 3 HOH A 26 234 234 HOH HOH . C 3 HOH A 27 235 235 HOH HOH . C 3 HOH A 28 236 236 HOH HOH . C 3 HOH A 29 237 237 HOH HOH . C 3 HOH A 30 238 238 HOH HOH . C 3 HOH A 31 239 239 HOH HOH . C 3 HOH A 32 240 240 HOH HOH . C 3 HOH A 33 241 241 HOH HOH . C 3 HOH A 34 242 242 HOH HOH . C 3 HOH A 35 243 243 HOH HOH . C 3 HOH A 36 244 244 HOH HOH . C 3 HOH A 37 245 245 HOH HOH . C 3 HOH A 38 246 246 HOH HOH . C 3 HOH A 39 247 247 HOH HOH . C 3 HOH A 40 248 248 HOH HOH . C 3 HOH A 41 249 249 HOH HOH . C 3 HOH A 42 250 250 HOH HOH . C 3 HOH A 43 251 251 HOH HOH . C 3 HOH A 44 252 252 HOH HOH . C 3 HOH A 45 253 253 HOH HOH . C 3 HOH A 46 254 254 HOH HOH . C 3 HOH A 47 255 255 HOH HOH . C 3 HOH A 48 256 256 HOH HOH . C 3 HOH A 49 257 257 HOH HOH . C 3 HOH A 50 258 258 HOH HOH . C 3 HOH A 51 259 259 HOH HOH . C 3 HOH A 52 260 260 HOH HOH . C 3 HOH A 53 261 261 HOH HOH . C 3 HOH A 54 262 262 HOH HOH . C 3 HOH A 55 263 263 HOH HOH . C 3 HOH A 56 264 264 HOH HOH . C 3 HOH A 57 265 1 HOH HOH . C 3 HOH A 58 266 17 HOH HOH . C 3 HOH A 59 267 18 HOH HOH . C 3 HOH A 60 268 19 HOH HOH . C 3 HOH A 61 269 20 HOH HOH . C 3 HOH A 62 270 21 HOH HOH . C 3 HOH A 63 271 22 HOH HOH . C 3 HOH A 64 272 23 HOH HOH . C 3 HOH A 65 273 24 HOH HOH . C 3 HOH A 66 274 25 HOH HOH . C 3 HOH A 67 275 26 HOH HOH . C 3 HOH A 68 276 27 HOH HOH . C 3 HOH A 69 277 28 HOH HOH . C 3 HOH A 70 278 29 HOH HOH . C 3 HOH A 71 279 30 HOH HOH . C 3 HOH A 72 280 31 HOH HOH . C 3 HOH A 73 281 32 HOH HOH . C 3 HOH A 74 282 33 HOH HOH . C 3 HOH A 75 283 34 HOH HOH . C 3 HOH A 76 284 35 HOH HOH . C 3 HOH A 77 285 36 HOH HOH . C 3 HOH A 78 286 37 HOH HOH . C 3 HOH A 79 287 38 HOH HOH . C 3 HOH A 80 288 39 HOH HOH . C 3 HOH A 81 289 40 HOH HOH . C 3 HOH A 82 290 41 HOH HOH . C 3 HOH A 83 291 42 HOH HOH . C 3 HOH A 84 292 43 HOH HOH . C 3 HOH A 85 293 44 HOH HOH . C 3 HOH A 86 294 45 HOH HOH . C 3 HOH A 87 295 46 HOH HOH . C 3 HOH A 88 296 47 HOH HOH . C 3 HOH A 89 297 48 HOH HOH . C 3 HOH A 90 298 49 HOH HOH . C 3 HOH A 91 299 50 HOH HOH . C 3 HOH A 92 300 51 HOH HOH . C 3 HOH A 93 301 52 HOH HOH . C 3 HOH A 94 302 53 HOH HOH . C 3 HOH A 95 303 54 HOH HOH . C 3 HOH A 96 304 55 HOH HOH . C 3 HOH A 97 305 56 HOH HOH . C 3 HOH A 98 306 57 HOH HOH . C 3 HOH A 99 307 58 HOH HOH . C 3 HOH A 100 308 59 HOH HOH . C 3 HOH A 101 309 60 HOH HOH . C 3 HOH A 102 310 61 HOH HOH . C 3 HOH A 103 311 62 HOH HOH . C 3 HOH A 104 312 63 HOH HOH . C 3 HOH A 105 313 64 HOH HOH . C 3 HOH A 106 314 65 HOH HOH . C 3 HOH A 107 315 66 HOH HOH . C 3 HOH A 108 316 67 HOH HOH . C 3 HOH A 109 317 68 HOH HOH . C 3 HOH A 110 318 69 HOH HOH . C 3 HOH A 111 319 70 HOH HOH . C 3 HOH A 112 320 71 HOH HOH . C 3 HOH A 113 321 72 HOH HOH . C 3 HOH A 114 322 73 HOH HOH . C 3 HOH A 115 323 74 HOH HOH . C 3 HOH A 116 324 75 HOH HOH . C 3 HOH A 117 325 76 HOH HOH . C 3 HOH A 118 326 77 HOH HOH . C 3 HOH A 119 327 78 HOH HOH . C 3 HOH A 120 328 79 HOH HOH . C 3 HOH A 121 329 80 HOH HOH . C 3 HOH A 122 330 81 HOH HOH . C 3 HOH A 123 331 82 HOH HOH . C 3 HOH A 124 332 83 HOH HOH . C 3 HOH A 125 333 84 HOH HOH . C 3 HOH A 126 334 85 HOH HOH . C 3 HOH A 127 335 86 HOH HOH . C 3 HOH A 128 336 87 HOH HOH . C 3 HOH A 129 337 88 HOH HOH . C 3 HOH A 130 338 89 HOH HOH . C 3 HOH A 131 339 90 HOH HOH . C 3 HOH A 132 340 91 HOH HOH . C 3 HOH A 133 341 92 HOH HOH . C 3 HOH A 134 342 93 HOH HOH . C 3 HOH A 135 343 94 HOH HOH . C 3 HOH A 136 344 95 HOH HOH . C 3 HOH A 137 345 96 HOH HOH . C 3 HOH A 138 346 97 HOH HOH . C 3 HOH A 139 347 98 HOH HOH . C 3 HOH A 140 348 99 HOH HOH . C 3 HOH A 141 349 100 HOH HOH . C 3 HOH A 142 350 101 HOH HOH . C 3 HOH A 143 351 102 HOH HOH . C 3 HOH A 144 352 103 HOH HOH . C 3 HOH A 145 353 104 HOH HOH . C 3 HOH A 146 354 105 HOH HOH . C 3 HOH A 147 355 106 HOH HOH . C 3 HOH A 148 356 107 HOH HOH . C 3 HOH A 149 357 108 HOH HOH . C 3 HOH A 150 358 109 HOH HOH . C 3 HOH A 151 359 110 HOH HOH . C 3 HOH A 152 360 111 HOH HOH . C 3 HOH A 153 361 112 HOH HOH . C 3 HOH A 154 362 113 HOH HOH . C 3 HOH A 155 363 114 HOH HOH . C 3 HOH A 156 364 115 HOH HOH . C 3 HOH A 157 365 116 HOH HOH . C 3 HOH A 158 366 117 HOH HOH . C 3 HOH A 159 367 118 HOH HOH . C 3 HOH A 160 368 119 HOH HOH . C 3 HOH A 161 369 120 HOH HOH . C 3 HOH A 162 370 121 HOH HOH . C 3 HOH A 163 371 122 HOH HOH . C 3 HOH A 164 372 123 HOH HOH . C 3 HOH A 165 373 124 HOH HOH . C 3 HOH A 166 374 125 HOH HOH . C 3 HOH A 167 375 126 HOH HOH . C 3 HOH A 168 376 127 HOH HOH . C 3 HOH A 169 377 128 HOH HOH . C 3 HOH A 170 378 129 HOH HOH . C 3 HOH A 171 379 130 HOH HOH . C 3 HOH A 172 380 131 HOH HOH . C 3 HOH A 173 381 132 HOH HOH . C 3 HOH A 174 382 133 HOH HOH . C 3 HOH A 175 383 134 HOH HOH . C 3 HOH A 176 384 135 HOH HOH . C 3 HOH A 177 385 136 HOH HOH . C 3 HOH A 178 386 137 HOH HOH . C 3 HOH A 179 387 138 HOH HOH . C 3 HOH A 180 388 139 HOH HOH . C 3 HOH A 181 389 140 HOH HOH . C 3 HOH A 182 390 141 HOH HOH . C 3 HOH A 183 391 142 HOH HOH . C 3 HOH A 184 392 143 HOH HOH . C 3 HOH A 185 393 144 HOH HOH . C 3 HOH A 186 394 145 HOH HOH . C 3 HOH A 187 395 146 HOH HOH . C 3 HOH A 188 396 147 HOH HOH . C 3 HOH A 189 397 148 HOH HOH . C 3 HOH A 190 398 149 HOH HOH . C 3 HOH A 191 399 150 HOH HOH . C 3 HOH A 192 400 151 HOH HOH . C 3 HOH A 193 401 152 HOH HOH . C 3 HOH A 194 402 153 HOH HOH . C 3 HOH A 195 403 154 HOH HOH . C 3 HOH A 196 404 155 HOH HOH . C 3 HOH A 197 405 156 HOH HOH . C 3 HOH A 198 406 157 HOH HOH . C 3 HOH A 199 407 158 HOH HOH . C 3 HOH A 200 408 159 HOH HOH . C 3 HOH A 201 409 160 HOH HOH . C 3 HOH A 202 410 161 HOH HOH . C 3 HOH A 203 411 162 HOH HOH . C 3 HOH A 204 412 163 HOH HOH . C 3 HOH A 205 413 164 HOH HOH . C 3 HOH A 206 414 165 HOH HOH . C 3 HOH A 207 415 166 HOH HOH . C 3 HOH A 208 416 167 HOH HOH . C 3 HOH A 209 417 168 HOH HOH . C 3 HOH A 210 418 169 HOH HOH . C 3 HOH A 211 419 170 HOH HOH . C 3 HOH A 212 420 171 HOH HOH . C 3 HOH A 213 421 172 HOH HOH . C 3 HOH A 214 422 173 HOH HOH . C 3 HOH A 215 423 174 HOH HOH . C 3 HOH A 216 424 175 HOH HOH . C 3 HOH A 217 425 176 HOH HOH . C 3 HOH A 218 426 177 HOH HOH . C 3 HOH A 219 427 178 HOH HOH . C 3 HOH A 220 428 179 HOH HOH . C 3 HOH A 221 429 180 HOH HOH . C 3 HOH A 222 430 181 HOH HOH . C 3 HOH A 223 431 182 HOH HOH . C 3 HOH A 224 432 183 HOH HOH . C 3 HOH A 225 433 184 HOH HOH . C 3 HOH A 226 434 185 HOH HOH . C 3 HOH A 227 435 186 HOH HOH . C 3 HOH A 228 436 187 HOH HOH . C 3 HOH A 229 437 188 HOH HOH . C 3 HOH A 230 438 189 HOH HOH . C 3 HOH A 231 439 190 HOH HOH . C 3 HOH A 232 440 191 HOH HOH . C 3 HOH A 233 441 192 HOH HOH . C 3 HOH A 234 442 193 HOH HOH . C 3 HOH A 235 443 194 HOH HOH . C 3 HOH A 236 444 195 HOH HOH . C 3 HOH A 237 445 196 HOH HOH . C 3 HOH A 238 446 197 HOH HOH . C 3 HOH A 239 447 198 HOH HOH . C 3 HOH A 240 448 199 HOH HOH . C 3 HOH A 241 449 200 HOH HOH . C 3 HOH A 242 450 201 HOH HOH . C 3 HOH A 243 451 202 HOH HOH . C 3 HOH A 244 452 203 HOH HOH . C 3 HOH A 245 453 204 HOH HOH . C 3 HOH A 246 454 205 HOH HOH . C 3 HOH A 247 455 206 HOH HOH . C 3 HOH A 248 456 207 HOH HOH . C 3 HOH A 249 457 208 HOH HOH . C 3 HOH A 250 458 209 HOH HOH . C 3 HOH A 251 459 210 HOH HOH . C 3 HOH A 252 460 211 HOH HOH . C 3 HOH A 253 461 212 HOH HOH . C 3 HOH A 254 462 213 HOH HOH . C 3 HOH A 255 463 214 HOH HOH . C 3 HOH A 256 464 215 HOH HOH . C 3 HOH A 257 465 216 HOH HOH . C 3 HOH A 258 466 217 HOH HOH . C 3 HOH A 259 467 218 HOH HOH . C 3 HOH A 260 468 219 HOH HOH . C 3 HOH A 261 469 220 HOH HOH . C 3 HOH A 262 470 221 HOH HOH . C 3 HOH A 263 471 222 HOH HOH . C 3 HOH A 264 472 223 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MEX . . . B 2 -0.329 -11.536 -2.825 1 31.33 ? C1 MEX 1 A 1 HETATM 2 C C2 MEX . . . B 2 -1.499 -11.533 -3.563 1 27.28 ? C2 MEX 1 A 1 HETATM 3 C C3 MEX . . . B 2 -2.65 -12.077 -3.034 1 25.36 ? C3 MEX 1 A 1 HETATM 4 C C4 MEX . . . B 2 -2.718 -12.571 -1.745 1 24.22 ? C4 MEX 1 A 1 HETATM 5 C C5 MEX . . . B 2 -1.536 -12.553 -1.013 1 28.79 ? C5 MEX 1 A 1 HETATM 6 C C6 MEX . . . B 2 -0.358 -12.057 -1.544 1 29.77 ? C6 MEX 1 A 1 HETATM 7 O O7 MEX . . . B 2 -1.529 -13.003 0.309 1 24.98 ? O7 MEX 1 A 1 HETATM 8 O O8 MEX . . . B 2 -3.781 -12.046 -3.828 1 26.67 ? O8 MEX 1 A 1 HETATM 9 N N9 MEX . . . B 2 -1.574 -10.967 -4.87 1 26.84 ? N9 MEX 1 A 1 HETATM 10 C C10 MEX . . . B 2 -1.413 -9.601 -5.141 1 28.76 ? C10 MEX 1 A 1 HETATM 11 C C11 MEX . . . B 2 -1.455 -9.451 -6.502 1 33.89 ? C11 MEX 1 A 1 HETATM 12 N N12 MEX . . . B 2 -1.638 -10.703 -7.082 1 26.59 ? N12 MEX 1 A 1 HETATM 13 C C13 MEX . . . B 2 -1.735 -11.648 -6.054 1 25.74 ? C13 MEX 1 A 1 HETATM 14 C C14 MEX . . . B 2 -1.273 -8.532 -4.297 1 27.19 ? C14 MEX 1 A 1 HETATM 15 C C15 MEX . . . B 2 -1.168 -7.295 -4.894 1 31 ? C15 MEX 1 A 1 HETATM 16 C C16 MEX . . . B 2 -1.197 -7.143 -6.269 1 32.38 ? C16 MEX 1 A 1 HETATM 17 C C17 MEX . . . B 2 -1.343 -8.223 -7.114 1 30.01 ? C17 MEX 1 A 1 HETATM 18 O O18 MEX . . . B 2 -1.886 -12.853 -6.164 1 25.22 ? O18 MEX 1 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #