data_3OXF # _model_server_result.job_id asQ79-MdfxNtwXwSgN7aaw _model_server_result.datetime_utc '2024-11-04 20:35:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3oxf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":440}' # _entry.id 3OXF # _exptl.entry_id 3OXF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.78 _cell.angle_gamma 90 _cell.entry_id 3OXF _cell.length_a 57.991 _cell.length_b 117.99 _cell.length_c 82.808 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OXF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 49 A CYS 49 1_555 D ZN ZN . A ZN 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc2 A SG CYS 52 A CYS 52 1_555 D ZN ZN . A ZN 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc3 A SG CYS 62 A CYS 62 1_555 E ZN ZN . A ZN 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc4 A SG CYS 65 A CYS 65 1_555 E ZN ZN . A ZN 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc5 A SG CYS 71 A CYS 71 1_555 D ZN ZN . A ZN 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc6 A SG CYS 75 A CYS 75 1_555 D ZN ZN . A ZN 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc7 A NE2 HIS 83 A HIS 83 1_555 E ZN ZN . A ZN 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc8 A SG CYS 87 A CYS 87 1_555 E ZN ZN . A ZN 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc9 A SG CYS 208 A CYS 208 1_555 F ZN ZN . A ZN 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc10 A SG CYS 261 A CYS 261 1_555 F ZN ZN . A ZN 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc11 A SG CYS 263 A CYS 263 1_555 F ZN ZN . A ZN 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc12 A SG CYS 266 A CYS 266 1_555 F ZN ZN . A ZN 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc13 B SG CYS 49 B CYS 49 1_555 H ZN ZN . B ZN 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc14 B SG CYS 52 B CYS 52 1_555 H ZN ZN . B ZN 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc15 B SG CYS 62 B CYS 62 1_555 I ZN ZN . B ZN 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc16 B SG CYS 65 B CYS 65 1_555 I ZN ZN . B ZN 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc17 B SG CYS 71 B CYS 71 1_555 H ZN ZN . B ZN 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc18 B SG CYS 75 B CYS 75 1_555 H ZN ZN . B ZN 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc19 B NE2 HIS 83 B HIS 83 1_555 I ZN ZN . B ZN 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? metalc ? metalc20 B SG CYS 87 B CYS 87 1_555 I ZN ZN . B ZN 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc21 B SG CYS 208 B CYS 208 1_555 J ZN ZN . B ZN 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc22 B SG CYS 261 B CYS 261 1_555 J ZN ZN . B ZN 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc23 B SG CYS 263 B CYS 263 1_555 J ZN ZN . B ZN 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc24 B SG CYS 266 B CYS 266 1_555 J ZN ZN . B ZN 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3OXF _atom_sites.fract_transf_matrix[1][1] 0.017244 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000536 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008475 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012082 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAH A 1 437 100 SAH SAH . D 3 ZN A 1 438 101 ZN ZN . E 3 ZN A 1 439 102 ZN ZN . F 3 ZN A 1 440 103 ZN ZN . G 2 SAH B 1 437 200 SAH SAH . H 3 ZN B 1 438 201 ZN ZN . I 3 ZN B 1 439 202 ZN ZN . J 3 ZN B 1 440 203 ZN ZN . K 4 HOH A 1 441 1 HOH HOH . K 4 HOH A 2 442 2 HOH HOH . K 4 HOH A 3 443 3 HOH HOH . K 4 HOH A 4 444 4 HOH HOH . K 4 HOH A 5 445 5 HOH HOH . K 4 HOH A 6 446 6 HOH HOH . K 4 HOH A 7 447 7 HOH HOH . K 4 HOH A 8 448 8 HOH HOH . K 4 HOH A 9 449 13 HOH HOH . K 4 HOH A 10 450 14 HOH HOH . K 4 HOH A 11 451 15 HOH HOH . K 4 HOH A 12 452 16 HOH HOH . K 4 HOH A 13 453 17 HOH HOH . K 4 HOH A 14 454 20 HOH HOH . K 4 HOH A 15 455 23 HOH HOH . K 4 HOH A 16 456 24 HOH HOH . L 4 HOH B 1 441 9 HOH HOH . L 4 HOH B 2 442 10 HOH HOH . L 4 HOH B 3 443 11 HOH HOH . L 4 HOH B 4 444 12 HOH HOH . L 4 HOH B 5 445 18 HOH HOH . L 4 HOH B 6 446 19 HOH HOH . L 4 HOH B 7 447 21 HOH HOH . L 4 HOH B 8 448 22 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x 57.275 _atom_site.Cartn_y -50.967 _atom_site.Cartn_z 56.357 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.95 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 440 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #