data_3OXW # _model_server_result.job_id X0fCCdjKwyWA2u0b347n9Q _model_server_result.datetime_utc '2024-11-17 12:31:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3oxw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":100}' # _entry.id 3OXW # _exptl.entry_id 3OXW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.33 _cell.angle_gamma 90 _cell.entry_id 3OXW _cell.length_a 50.62 _cell.length_b 63.344 _cell.length_c 58.648 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OXW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,W,X 1 1 C,D,N,O,P,Q,R,S,T,U,V,Y,Z 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 K N N ? 3 R N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 366 n n P O2 PO4 sing 367 n n P O3 PO4 sing 368 n n P O4 PO4 sing 369 n n # _atom_sites.entry_id 3OXW _atom_sites.fract_transf_matrix[1][1] 0.019755 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002541 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015787 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017191 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 017 B 1 200 200 017 017 . F 3 PO4 B 1 100 1 PO4 PO4 . G 4 ACT B 1 101 1 ACT ACT . H 4 ACT B 1 102 5 ACT ACT . I 5 EDO B 1 103 2 EDO EDO . J 6 GOL B 1 104 1 GOL GOL . K 3 PO4 A 1 100 5 PO4 PO4 . L 4 ACT A 1 101 3 ACT ACT . M 5 EDO A 1 102 1 EDO EDO . N 4 ACT D 1 100 4 ACT ACT . O 6 GOL D 1 101 4 GOL GOL . P 6 GOL D 1 102 5 GOL GOL . Q 2 017 D 1 200 200 017 017 . R 3 PO4 C 1 100 7 PO4 PO4 . S 6 GOL C 1 101 3 GOL GOL . T 5 EDO C 1 102 4 EDO EDO . U 5 EDO C 1 103 5 EDO EDO . V 5 EDO C 1 104 6 EDO EDO . W 7 HOH B 1 105 1 HOH HOH . W 7 HOH B 2 106 26 HOH HOH . W 7 HOH B 3 107 107 HOH HOH . W 7 HOH B 4 108 32 HOH HOH . W 7 HOH B 5 109 34 HOH HOH . W 7 HOH B 6 110 37 HOH HOH . W 7 HOH B 7 111 40 HOH HOH . W 7 HOH B 8 112 41 HOH HOH . W 7 HOH B 9 113 43 HOH HOH . W 7 HOH B 10 114 45 HOH HOH . W 7 HOH B 11 115 46 HOH HOH . W 7 HOH B 12 116 116 HOH HOH . W 7 HOH B 13 117 51 HOH HOH . W 7 HOH B 14 118 52 HOH HOH . W 7 HOH B 15 119 54 HOH HOH . W 7 HOH B 16 120 58 HOH HOH . W 7 HOH B 17 121 59 HOH HOH . W 7 HOH B 18 122 60 HOH HOH . W 7 HOH B 19 123 61 HOH HOH . W 7 HOH B 20 124 124 HOH HOH . W 7 HOH B 21 125 62 HOH HOH . W 7 HOH B 22 126 126 HOH HOH . W 7 HOH B 23 127 127 HOH HOH . W 7 HOH B 24 128 128 HOH HOH . W 7 HOH B 25 129 71 HOH HOH . W 7 HOH B 26 130 73 HOH HOH . W 7 HOH B 27 131 74 HOH HOH . W 7 HOH B 28 132 77 HOH HOH . W 7 HOH B 29 133 79 HOH HOH . W 7 HOH B 30 134 134 HOH HOH . W 7 HOH B 31 135 81 HOH HOH . W 7 HOH B 32 136 83 HOH HOH . W 7 HOH B 33 137 86 HOH HOH . W 7 HOH B 34 138 87 HOH HOH . W 7 HOH B 35 139 88 HOH HOH . W 7 HOH B 36 140 140 HOH HOH . W 7 HOH B 37 141 141 HOH HOH . W 7 HOH B 38 142 89 HOH HOH . W 7 HOH B 39 143 90 HOH HOH . W 7 HOH B 40 144 99 HOH HOH . W 7 HOH B 41 145 100 HOH HOH . W 7 HOH B 42 146 101 HOH HOH . X 7 HOH A 1 103 2 HOH HOH . X 7 HOH A 2 104 104 HOH HOH . X 7 HOH A 3 105 3 HOH HOH . X 7 HOH A 4 106 13 HOH HOH . X 7 HOH A 5 107 14 HOH HOH . X 7 HOH A 6 108 18 HOH HOH . X 7 HOH A 7 109 20 HOH HOH . X 7 HOH A 8 110 22 HOH HOH . X 7 HOH A 9 111 111 HOH HOH . X 7 HOH A 10 112 29 HOH HOH . X 7 HOH A 11 113 30 HOH HOH . X 7 HOH A 12 114 114 HOH HOH . X 7 HOH A 13 115 36 HOH HOH . X 7 HOH A 14 116 38 HOH HOH . X 7 HOH A 15 117 42 HOH HOH . X 7 HOH A 16 118 49 HOH HOH . X 7 HOH A 17 119 119 HOH HOH . X 7 HOH A 18 120 50 HOH HOH . X 7 HOH A 19 121 121 HOH HOH . X 7 HOH A 20 122 53 HOH HOH . X 7 HOH A 21 123 55 HOH HOH . X 7 HOH A 22 124 65 HOH HOH . X 7 HOH A 23 125 125 HOH HOH . X 7 HOH A 24 126 67 HOH HOH . X 7 HOH A 25 127 70 HOH HOH . X 7 HOH A 26 128 78 HOH HOH . X 7 HOH A 27 129 129 HOH HOH . X 7 HOH A 28 130 80 HOH HOH . X 7 HOH A 29 131 131 HOH HOH . X 7 HOH A 30 132 132 HOH HOH . X 7 HOH A 31 133 82 HOH HOH . X 7 HOH A 32 134 91 HOH HOH . X 7 HOH A 33 135 92 HOH HOH . X 7 HOH A 34 136 93 HOH HOH . X 7 HOH A 35 137 94 HOH HOH . X 7 HOH A 36 138 138 HOH HOH . X 7 HOH A 37 139 95 HOH HOH . X 7 HOH A 38 140 96 HOH HOH . X 7 HOH A 39 141 97 HOH HOH . X 7 HOH A 40 142 98 HOH HOH . Y 7 HOH D 1 103 4 HOH HOH . Y 7 HOH D 2 104 10 HOH HOH . Y 7 HOH D 3 105 105 HOH HOH . Y 7 HOH D 4 106 106 HOH HOH . Y 7 HOH D 5 107 11 HOH HOH . Y 7 HOH D 6 108 16 HOH HOH . Y 7 HOH D 7 109 19 HOH HOH . Y 7 HOH D 8 110 110 HOH HOH . Y 7 HOH D 9 111 23 HOH HOH . Y 7 HOH D 10 112 112 HOH HOH . Y 7 HOH D 11 113 113 HOH HOH . Y 7 HOH D 12 114 27 HOH HOH . Y 7 HOH D 13 115 115 HOH HOH . Y 7 HOH D 14 116 28 HOH HOH . Y 7 HOH D 15 117 117 HOH HOH . Y 7 HOH D 16 118 31 HOH HOH . Y 7 HOH D 17 119 33 HOH HOH . Y 7 HOH D 18 120 35 HOH HOH . Y 7 HOH D 19 121 39 HOH HOH . Y 7 HOH D 20 122 57 HOH HOH . Y 7 HOH D 21 123 63 HOH HOH . Y 7 HOH D 22 124 68 HOH HOH . Y 7 HOH D 23 125 69 HOH HOH . Y 7 HOH D 24 126 84 HOH HOH . Y 7 HOH D 25 127 102 HOH HOH . Y 7 HOH D 26 135 135 HOH HOH . Y 7 HOH D 27 139 139 HOH HOH . Z 7 HOH C 1 105 5 HOH HOH . Z 7 HOH C 2 106 6 HOH HOH . Z 7 HOH C 3 107 7 HOH HOH . Z 7 HOH C 4 108 108 HOH HOH . Z 7 HOH C 5 109 109 HOH HOH . Z 7 HOH C 6 110 8 HOH HOH . Z 7 HOH C 7 111 9 HOH HOH . Z 7 HOH C 8 112 12 HOH HOH . Z 7 HOH C 9 113 15 HOH HOH . Z 7 HOH C 10 114 17 HOH HOH . Z 7 HOH C 11 115 21 HOH HOH . Z 7 HOH C 12 116 24 HOH HOH . Z 7 HOH C 13 117 25 HOH HOH . Z 7 HOH C 14 118 118 HOH HOH . Z 7 HOH C 15 119 44 HOH HOH . Z 7 HOH C 16 120 120 HOH HOH . Z 7 HOH C 17 121 47 HOH HOH . Z 7 HOH C 18 122 122 HOH HOH . Z 7 HOH C 19 123 123 HOH HOH . Z 7 HOH C 20 124 48 HOH HOH . Z 7 HOH C 21 125 56 HOH HOH . Z 7 HOH C 22 126 64 HOH HOH . Z 7 HOH C 23 127 66 HOH HOH . Z 7 HOH C 24 128 72 HOH HOH . Z 7 HOH C 25 129 75 HOH HOH . Z 7 HOH C 26 130 130 HOH HOH . Z 7 HOH C 27 131 76 HOH HOH . Z 7 HOH C 28 132 85 HOH HOH . Z 7 HOH C 29 133 133 HOH HOH . Z 7 HOH C 30 134 103 HOH HOH . Z 7 HOH C 31 136 136 HOH HOH . Z 7 HOH C 32 137 137 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . F 3 -44.895 9.229 -3.891 1 58.16 ? P PO4 100 B 1 HETATM 2 O O1 PO4 . . . F 3 -43.627 10.023 -4.113 1 56.63 ? O1 PO4 100 B 1 HETATM 3 O O2 PO4 . . . F 3 -46.058 9.922 -4.554 1 60.17 ? O2 PO4 100 B 1 HETATM 4 O O3 PO4 . . . F 3 -44.721 7.889 -4.566 1 61.88 ? O3 PO4 100 B 1 HETATM 5 O O4 PO4 . . . F 3 -45.165 9.003 -2.417 1 50.25 ? O4 PO4 100 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #