data_3OXZ # _model_server_result.job_id UpbRZUyyW4qKgVRwAHht4Q _model_server_result.datetime_utc '2024-11-14 18:36:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3oxz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3OXZ # _exptl.entry_id 3OXZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 532.559 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.01 _cell.angle_gamma 90 _cell.entry_id 3OXZ _cell.length_a 41.883 _cell.length_b 59.906 _cell.length_c 66.281 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OXZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H27 F3 N6 O' _chem_comp.formula_weight 532.559 _chem_comp.id 0LI _chem_comp.mon_nstd_flag . _chem_comp.name '3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Ponatinib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C84 0LI doub 1 n y N1 C1 0LI sing 2 n y N3 C20 0LI sing 3 n n N3 C21 0LI sing 4 n n N3 C24 0LI sing 5 n n C4 C5 0LI sing 6 n n C4 C3 0LI trip 7 n n C5 C6 0LI doub 8 n y C5 C10 0LI sing 9 n y C6 C7 0LI sing 10 n y C6 C11 0LI sing 11 n n C7 C8 0LI doub 12 n y C7 H7 0LI sing 13 n n C8 C9 0LI sing 14 n y C8 H8 0LI sing 15 n n C10 C9 0LI doub 16 n y C10 H10 0LI sing 17 n n C13 N2 0LI sing 18 n n C13 C14 0LI doub 19 n y C13 C18 0LI sing 20 n y C15 C14 0LI sing 21 n y C15 C16 0LI doub 22 n y C15 H15 0LI sing 23 n n C17 C16 0LI sing 24 n y C17 C18 0LI doub 25 n y C17 C19 0LI sing 26 n n C20 C16 0LI sing 27 n n C20 H20 0LI sing 28 n n C20 H20A 0LI sing 29 n n C21 C22 0LI sing 30 n n C21 H21 0LI sing 31 n n C21 H21A 0LI sing 32 n n C22 N4 0LI sing 33 n n C22 H22 0LI sing 34 n n C22 H22A 0LI sing 35 n n C24 C23 0LI sing 36 n n C24 H24 0LI sing 37 n n C24 H24A 0LI sing 38 n n C81 C82 0LI doub 39 n y C81 C84 0LI sing 40 n y C81 H81 0LI sing 41 n n C82 C83 0LI sing 42 n y C82 H82 0LI sing 43 n n C83 N81 0LI doub 44 n y C83 H83 0LI sing 45 n n N81 N82 0LI sing 46 n y N82 C84 0LI sing 47 n y N82 C2 0LI sing 48 n y C1 C2 0LI doub 49 n y C1 H1 0LI sing 50 n n C2 C3 0LI sing 51 n n C9 C12 0LI sing 52 n n C11 H11 0LI sing 53 n n C11 H11A 0LI sing 54 n n C11 H11B 0LI sing 55 n n C12 O1 0LI doub 56 n n C12 N2 0LI sing 57 n n N2 HN2 0LI sing 58 n n C14 H14 0LI sing 59 n n C18 H18 0LI sing 60 n n C19 F1 0LI sing 61 n n C19 F2 0LI sing 62 n n C19 F3 0LI sing 63 n n C23 N4 0LI sing 64 n n C23 H23 0LI sing 65 n n C23 H23A 0LI sing 66 n n C25 N4 0LI sing 67 n n C25 H25 0LI sing 68 n n C25 H25A 0LI sing 69 n n C25 H25B 0LI sing 70 n n # _atom_sites.entry_id 3OXZ _atom_sites.fract_transf_matrix[1][1] 0.023876 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002514 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016693 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015171 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 0LI A 1 1 1 0LI 0LI . C 3 HOH A 1 2 2 HOH TIP . C 3 HOH A 2 3 3 HOH TIP . C 3 HOH A 3 4 4 HOH TIP . C 3 HOH A 4 5 5 HOH TIP . C 3 HOH A 5 6 6 HOH TIP . C 3 HOH A 6 7 7 HOH TIP . C 3 HOH A 7 8 8 HOH TIP . C 3 HOH A 8 9 9 HOH TIP . C 3 HOH A 9 10 10 HOH TIP . C 3 HOH A 10 11 11 HOH TIP . C 3 HOH A 11 12 12 HOH TIP . C 3 HOH A 12 13 13 HOH TIP . C 3 HOH A 13 14 14 HOH TIP . C 3 HOH A 14 15 15 HOH TIP . C 3 HOH A 15 16 16 HOH TIP . C 3 HOH A 16 17 17 HOH TIP . C 3 HOH A 17 18 18 HOH TIP . C 3 HOH A 18 19 19 HOH TIP . C 3 HOH A 19 20 20 HOH TIP . C 3 HOH A 20 21 21 HOH TIP . C 3 HOH A 21 22 22 HOH TIP . C 3 HOH A 22 23 23 HOH TIP . C 3 HOH A 23 24 24 HOH TIP . C 3 HOH A 24 25 25 HOH TIP . C 3 HOH A 25 26 26 HOH TIP . C 3 HOH A 26 27 27 HOH TIP . C 3 HOH A 27 28 28 HOH TIP . C 3 HOH A 28 29 29 HOH TIP . C 3 HOH A 29 30 30 HOH TIP . C 3 HOH A 30 31 31 HOH TIP . C 3 HOH A 31 32 32 HOH TIP . C 3 HOH A 32 33 33 HOH TIP . C 3 HOH A 33 34 34 HOH TIP . C 3 HOH A 34 35 35 HOH TIP . C 3 HOH A 35 36 36 HOH TIP . C 3 HOH A 36 37 37 HOH TIP . C 3 HOH A 37 38 38 HOH TIP . C 3 HOH A 38 39 39 HOH TIP . C 3 HOH A 39 40 40 HOH TIP . C 3 HOH A 40 41 41 HOH TIP . C 3 HOH A 41 42 42 HOH TIP . C 3 HOH A 42 43 43 HOH TIP . C 3 HOH A 43 44 44 HOH TIP . C 3 HOH A 44 45 45 HOH TIP . C 3 HOH A 45 46 46 HOH TIP . C 3 HOH A 46 47 47 HOH TIP . C 3 HOH A 47 48 48 HOH TIP . C 3 HOH A 48 49 49 HOH TIP . C 3 HOH A 49 50 50 HOH TIP . C 3 HOH A 50 52 52 HOH TIP . C 3 HOH A 51 53 53 HOH TIP . C 3 HOH A 52 54 54 HOH TIP . C 3 HOH A 53 55 55 HOH TIP . C 3 HOH A 54 56 56 HOH TIP . C 3 HOH A 55 57 57 HOH TIP . C 3 HOH A 56 58 58 HOH TIP . C 3 HOH A 57 59 59 HOH TIP . C 3 HOH A 58 60 60 HOH TIP . C 3 HOH A 59 61 61 HOH TIP . C 3 HOH A 60 62 62 HOH TIP . C 3 HOH A 61 63 63 HOH TIP . C 3 HOH A 62 64 64 HOH TIP . C 3 HOH A 63 65 65 HOH TIP . C 3 HOH A 64 512 1 HOH TIP . C 3 HOH A 65 513 1 HOH TIP . C 3 HOH A 66 514 2 HOH TIP . C 3 HOH A 67 515 4 HOH TIP . C 3 HOH A 68 516 5 HOH TIP . C 3 HOH A 69 517 6 HOH TIP . C 3 HOH A 70 518 7 HOH TIP . C 3 HOH A 71 519 8 HOH TIP . C 3 HOH A 72 520 9 HOH TIP . C 3 HOH A 73 521 10 HOH TIP . C 3 HOH A 74 522 11 HOH TIP . C 3 HOH A 75 523 12 HOH TIP . C 3 HOH A 76 524 13 HOH TIP . C 3 HOH A 77 525 14 HOH TIP . C 3 HOH A 78 526 15 HOH TIP . C 3 HOH A 79 527 16 HOH TIP . C 3 HOH A 80 528 17 HOH TIP . C 3 HOH A 81 529 18 HOH TIP . C 3 HOH A 82 530 19 HOH TIP . C 3 HOH A 83 531 20 HOH TIP . C 3 HOH A 84 532 21 HOH TIP . C 3 HOH A 85 533 23 HOH TIP . C 3 HOH A 86 534 24 HOH TIP . C 3 HOH A 87 535 25 HOH TIP . C 3 HOH A 88 536 26 HOH TIP . C 3 HOH A 89 537 27 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 0LI . . . B 2 16.231 -9.909 7.915 1 27.29 ? N1 0LI 1 A 1 HETATM 2 N N3 0LI . . . B 2 12.9 -5.127 23.2 1 31.16 ? N3 0LI 1 A 1 HETATM 3 C C4 0LI . . . B 2 17.326 -9.986 12.572 1 24.91 ? C4 0LI 1 A 1 HETATM 4 C C5 0LI . . . B 2 17.298 -10.203 14.015 1 26.45 ? C5 0LI 1 A 1 HETATM 5 C C6 0LI . . . B 2 17.881 -11.366 14.681 1 28.77 ? C6 0LI 1 A 1 HETATM 6 C C7 0LI . . . B 2 17.775 -11.477 16.113 1 28.94 ? C7 0LI 1 A 1 HETATM 7 C C8 0LI . . . B 2 17.106 -10.465 16.865 1 30.11 ? C8 0LI 1 A 1 HETATM 8 C C10 0LI . . . B 2 16.642 -9.213 14.785 1 27.23 ? C10 0LI 1 A 1 HETATM 9 C C13 0LI . . . B 2 14.76 -7.742 19.128 1 31.24 ? C13 0LI 1 A 1 HETATM 10 C C15 0LI . . . B 2 14.197 -7.099 21.442 1 32.88 ? C15 0LI 1 A 1 HETATM 11 C C17 0LI . . . B 2 12.695 -6.377 19.566 1 32.08 ? C17 0LI 1 A 1 HETATM 12 C C20 0LI . . . B 2 12.143 -5.711 22.085 1 29.95 ? C20 0LI 1 A 1 HETATM 13 C C21 0LI . . . B 2 13.814 -4.023 22.778 1 32.15 ? C21 0LI 1 A 1 HETATM 14 C C22 0LI . . . B 2 14.69 -3.566 23.966 1 31.08 ? C22 0LI 1 A 1 HETATM 15 C C24 0LI . . . B 2 12.019 -4.643 24.281 1 28.48 ? C24 0LI 1 A 1 HETATM 16 C C81 0LI . . . B 2 17.881 -8.356 6.791 1 28.42 ? C81 0LI 1 A 1 HETATM 17 C C82 0LI . . . B 2 18.968 -7.546 7.073 1 26.65 ? C82 0LI 1 A 1 HETATM 18 C C83 0LI . . . B 2 19.438 -7.459 8.416 1 28.11 ? C83 0LI 1 A 1 HETATM 19 N N81 0LI . . . B 2 18.916 -8.1 9.472 1 28.83 ? N81 0LI 1 A 1 HETATM 20 N N82 0LI . . . B 2 17.835 -8.891 9.139 1 25.15 ? N82 0LI 1 A 1 HETATM 21 C C84 0LI . . . B 2 17.257 -9.079 7.857 1 26.4 ? C84 0LI 1 A 1 HETATM 22 C C1 0LI . . . B 2 16.12 -10.272 9.243 1 23.61 ? C1 0LI 1 A 1 HETATM 23 C C2 0LI . . . B 2 17.082 -9.665 9.981 1 23 ? C2 0LI 1 A 1 HETATM 24 C C3 0LI . . . B 2 17.253 -9.818 11.367 1 23.74 ? C3 0LI 1 A 1 HETATM 25 C C9 0LI . . . B 2 16.535 -9.316 16.196 1 29.36 ? C9 0LI 1 A 1 HETATM 26 C C11 0LI . . . B 2 18.601 -12.481 13.924 1 28.14 ? C11 0LI 1 A 1 HETATM 27 C C12 0LI . . . B 2 15.826 -8.221 16.935 1 29.52 ? C12 0LI 1 A 1 HETATM 28 O O1 0LI . . . B 2 15.44 -7.217 16.328 1 32.52 ? O1 0LI 1 A 1 HETATM 29 N N2 0LI . . . B 2 15.654 -8.415 18.256 1 29.9 ? N2 0LI 1 A 1 HETATM 30 C C14 0LI . . . B 2 15.06 -7.76 20.512 1 32.94 ? C14 0LI 1 A 1 HETATM 31 C C16 0LI . . . B 2 13.008 -6.398 21.001 1 31.7 ? C16 0LI 1 A 1 HETATM 32 C C18 0LI . . . B 2 13.581 -7.051 18.671 1 32.72 ? C18 0LI 1 A 1 HETATM 33 C C19 0LI . . . B 2 11.465 -5.667 18.956 1 33.23 ? C19 0LI 1 A 1 HETATM 34 F F1 0LI . . . B 2 11.632 -4.358 19.013 1 33.4 ? F1 0LI 1 A 1 HETATM 35 F F2 0LI . . . B 2 11.279 -5.972 17.674 1 31.99 ? F2 0LI 1 A 1 HETATM 36 F F3 0LI . . . B 2 10.347 -6.003 19.605 1 36.12 ? F3 0LI 1 A 1 HETATM 37 C C23 0LI . . . B 2 12.839 -4.07 25.479 1 30.79 ? C23 0LI 1 A 1 HETATM 38 C C25 0LI . . . B 2 14.619 -2.508 26.149 1 30.23 ? C25 0LI 1 A 1 HETATM 39 N N4 0LI . . . B 2 13.831 -3.038 25.045 1 32.74 ? N4 0LI 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 39 #