data_3OZK # _model_server_result.job_id 9B0O8bddgE9FPUbrq1nYoA _model_server_result.datetime_utc '2024-10-13 04:21:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ozk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":128}' # _entry.id 3OZK # _exptl.entry_id 3OZK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 776.87 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "3,5,3',5'-TETRAIODO-L-THYRONINE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3OZK _cell.length_a 43.13 _cell.length_b 85.31 _cell.length_c 64.34 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OZK _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -43.13 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C15 H11 I4 N O4' _chem_comp.formula_weight 776.87 _chem_comp.id T44 _chem_comp.mon_nstd_flag . _chem_comp.name "3,5,3',5'-TETRAIODO-L-THYRONINE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 T44 doub 271 n y C1 C6 T44 sing 272 n y C1 C7 T44 sing 273 n n C2 C3 T44 sing 274 n y C2 H1 T44 sing 275 n n C3 C4 T44 doub 276 n y C3 I3 T44 sing 277 n n C4 C5 T44 sing 278 n y C4 O4 T44 sing 279 n n C5 C6 T44 doub 280 n y C5 I5 T44 sing 281 n n C6 H6 T44 sing 282 n n C7 CA T44 sing 283 n n C7 H71 T44 sing 284 n n C7 H72 T44 sing 285 n n CA C T44 sing 286 n n CA N T44 sing 287 n n CA HA T44 sing 288 n n C O T44 doub 289 n n C OXT T44 sing 290 n n C1' C2' T44 doub 291 n y C1' C6' T44 sing 292 n y C1' O4 T44 sing 293 n n C2' C3' T44 sing 294 n y C2' H2' T44 sing 295 n n C3' C4' T44 doub 296 n y C3' I3' T44 sing 297 n n C4' C5' T44 sing 298 n y C4' O4' T44 sing 299 n n C5' C6' T44 doub 300 n y C5' I5' T44 sing 301 n n C6' H6' T44 sing 302 n n N H T44 sing 303 n n N H2 T44 sing 304 n n O4' HO4' T44 sing 305 n n OXT HXT T44 sing 306 n n # _atom_sites.entry_id 3OZK _atom_sites.fract_transf_matrix[1][1] 0.023186 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011722 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015542 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 T44 A 1 128 128 T44 T44 . D 2 T44 B 1 128 128 T44 T44 . E 3 HOH A 1 129 129 HOH HOH . E 3 HOH A 2 130 130 HOH HOH . E 3 HOH A 3 131 131 HOH HOH . E 3 HOH A 4 132 132 HOH HOH . E 3 HOH A 5 133 133 HOH HOH . E 3 HOH A 6 134 134 HOH HOH . E 3 HOH A 7 135 135 HOH HOH . E 3 HOH A 8 136 136 HOH HOH . E 3 HOH A 9 137 137 HOH HOH . E 3 HOH A 10 138 138 HOH HOH . E 3 HOH A 11 139 139 HOH HOH . E 3 HOH A 12 140 140 HOH HOH . E 3 HOH A 13 141 141 HOH HOH . E 3 HOH A 14 142 142 HOH HOH . E 3 HOH A 15 143 143 HOH HOH . E 3 HOH A 16 144 144 HOH HOH . E 3 HOH A 17 145 145 HOH HOH . E 3 HOH A 18 146 146 HOH HOH . E 3 HOH A 19 147 147 HOH HOH . E 3 HOH A 20 148 148 HOH HOH . E 3 HOH A 21 149 149 HOH HOH . E 3 HOH A 22 150 150 HOH HOH . E 3 HOH A 23 151 151 HOH HOH . E 3 HOH A 24 152 152 HOH HOH . E 3 HOH A 25 153 153 HOH HOH . E 3 HOH A 26 154 154 HOH HOH . E 3 HOH A 27 155 155 HOH HOH . E 3 HOH A 28 156 156 HOH HOH . E 3 HOH A 29 157 157 HOH HOH . E 3 HOH A 30 158 158 HOH HOH . E 3 HOH A 31 159 159 HOH HOH . E 3 HOH A 32 160 160 HOH HOH . E 3 HOH A 33 161 161 HOH HOH . E 3 HOH A 34 162 162 HOH HOH . E 3 HOH A 35 163 163 HOH HOH . E 3 HOH A 36 164 164 HOH HOH . E 3 HOH A 37 165 165 HOH HOH . E 3 HOH A 38 166 166 HOH HOH . E 3 HOH A 39 167 167 HOH HOH . E 3 HOH A 40 168 168 HOH HOH . E 3 HOH A 41 169 169 HOH HOH . E 3 HOH A 42 170 170 HOH HOH . E 3 HOH A 43 171 171 HOH HOH . E 3 HOH A 44 172 172 HOH HOH . E 3 HOH A 45 173 173 HOH HOH . E 3 HOH A 46 174 174 HOH HOH . E 3 HOH A 47 175 175 HOH HOH . E 3 HOH A 48 176 176 HOH HOH . E 3 HOH A 49 177 177 HOH HOH . E 3 HOH A 50 178 178 HOH HOH . E 3 HOH A 51 179 179 HOH HOH . E 3 HOH A 52 180 180 HOH HOH . E 3 HOH A 53 181 181 HOH HOH . E 3 HOH A 54 182 182 HOH HOH . E 3 HOH A 55 183 183 HOH HOH . E 3 HOH A 56 184 184 HOH HOH . E 3 HOH A 57 185 185 HOH HOH . E 3 HOH A 58 186 186 HOH HOH . E 3 HOH A 59 187 187 HOH HOH . E 3 HOH A 60 188 188 HOH HOH . E 3 HOH A 61 189 189 HOH HOH . E 3 HOH A 62 190 190 HOH HOH . E 3 HOH A 63 191 191 HOH HOH . E 3 HOH A 64 192 192 HOH HOH . E 3 HOH A 65 193 193 HOH HOH . E 3 HOH A 66 194 194 HOH HOH . E 3 HOH A 67 195 195 HOH HOH . E 3 HOH A 68 196 196 HOH HOH . E 3 HOH A 69 197 197 HOH HOH . E 3 HOH A 70 198 198 HOH HOH . E 3 HOH A 71 199 199 HOH HOH . E 3 HOH A 72 200 200 HOH HOH . E 3 HOH A 73 201 201 HOH HOH . E 3 HOH A 74 202 202 HOH HOH . E 3 HOH A 75 203 203 HOH HOH . E 3 HOH A 76 204 204 HOH HOH . E 3 HOH A 77 205 205 HOH HOH . E 3 HOH A 78 206 206 HOH HOH . E 3 HOH A 79 207 207 HOH HOH . F 3 HOH B 1 129 129 HOH HOH . F 3 HOH B 2 130 130 HOH HOH . F 3 HOH B 3 131 131 HOH HOH . F 3 HOH B 4 132 132 HOH HOH . F 3 HOH B 5 133 133 HOH HOH . F 3 HOH B 6 134 134 HOH HOH . F 3 HOH B 7 135 135 HOH HOH . F 3 HOH B 8 136 136 HOH HOH . F 3 HOH B 9 137 137 HOH HOH . F 3 HOH B 10 138 138 HOH HOH . F 3 HOH B 11 139 139 HOH HOH . F 3 HOH B 12 140 140 HOH HOH . F 3 HOH B 13 141 141 HOH HOH . F 3 HOH B 14 142 142 HOH HOH . F 3 HOH B 15 143 143 HOH HOH . F 3 HOH B 16 144 144 HOH HOH . F 3 HOH B 17 145 145 HOH HOH . F 3 HOH B 18 147 147 HOH HOH . F 3 HOH B 19 148 148 HOH HOH . F 3 HOH B 20 149 149 HOH HOH . F 3 HOH B 21 150 150 HOH HOH . F 3 HOH B 22 151 151 HOH HOH . F 3 HOH B 23 152 152 HOH HOH . F 3 HOH B 24 153 153 HOH HOH . F 3 HOH B 25 154 154 HOH HOH . F 3 HOH B 26 155 155 HOH HOH . F 3 HOH B 27 156 156 HOH HOH . F 3 HOH B 28 157 157 HOH HOH . F 3 HOH B 29 158 158 HOH HOH . F 3 HOH B 30 159 159 HOH HOH . F 3 HOH B 31 160 160 HOH HOH . F 3 HOH B 32 161 161 HOH HOH . F 3 HOH B 33 162 162 HOH HOH . F 3 HOH B 34 163 163 HOH HOH . F 3 HOH B 35 164 164 HOH HOH . F 3 HOH B 36 165 165 HOH HOH . F 3 HOH B 37 166 166 HOH HOH . F 3 HOH B 38 167 167 HOH HOH . F 3 HOH B 39 168 168 HOH HOH . F 3 HOH B 40 169 169 HOH HOH . F 3 HOH B 41 170 170 HOH HOH . F 3 HOH B 42 171 171 HOH HOH . F 3 HOH B 43 172 172 HOH HOH . F 3 HOH B 44 174 174 HOH HOH . F 3 HOH B 45 175 175 HOH HOH . F 3 HOH B 46 176 176 HOH HOH . F 3 HOH B 47 177 177 HOH HOH . F 3 HOH B 48 178 178 HOH HOH . F 3 HOH B 49 179 179 HOH HOH . F 3 HOH B 50 180 180 HOH HOH . F 3 HOH B 51 181 181 HOH HOH . F 3 HOH B 52 182 182 HOH HOH . F 3 HOH B 53 183 183 HOH HOH . F 3 HOH B 54 184 184 HOH HOH . F 3 HOH B 55 185 185 HOH HOH . F 3 HOH B 56 186 186 HOH HOH . F 3 HOH B 57 187 187 HOH HOH . F 3 HOH B 58 188 188 HOH HOH . F 3 HOH B 59 189 189 HOH HOH . F 3 HOH B 60 190 190 HOH HOH . F 3 HOH B 61 191 191 HOH HOH . F 3 HOH B 62 192 192 HOH HOH . F 3 HOH B 63 193 193 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 T44 . . . D 2 -22.59 1.168 -3.168 0.25 61.35 ? C1 T44 128 B 1 HETATM 2 C C2 T44 . . . D 2 -23.111 1.119 -4.37 0.25 63.36 ? C2 T44 128 B 1 HETATM 3 C C3 T44 . . . D 2 -22.361 0.288 -5.187 0.25 64.88 ? C3 T44 128 B 1 HETATM 4 C C4 T44 . . . D 2 -21.174 -0.382 -4.898 0.25 63.49 ? C4 T44 128 B 1 HETATM 5 C C5 T44 . . . D 2 -20.582 -0.341 -3.623 0.25 62.93 ? C5 T44 128 B 1 HETATM 6 C C6 T44 . . . D 2 -21.385 0.582 -2.781 0.25 62.22 ? C6 T44 128 B 1 HETATM 7 C C7 T44 . . . D 2 -23.351 2.082 -2.255 0.25 59.75 ? C7 T44 128 B 1 HETATM 8 C CA T44 . . . D 2 -24.108 1.497 -1.084 0.25 57.72 ? CA T44 128 B 1 HETATM 9 C C T44 . . . D 2 -25.375 0.894 -1.65 0.25 57.09 ? C T44 128 B 1 HETATM 10 C C1' T44 . . . D 2 -20.893 -0.498 -7.363 0.25 60.58 ? C1' T44 128 B 1 HETATM 11 C C2' T44 . . . D 2 -21.156 0.822 -7.842 0.25 59.5 ? C2' T44 128 B 1 HETATM 12 C C3' T44 . . . D 2 -21.373 1.097 -9.237 0.25 59.13 ? C3' T44 128 B 1 HETATM 13 C C4' T44 . . . D 2 -21.352 0.051 -10.181 0.25 58.86 ? C4' T44 128 B 1 HETATM 14 C C5' T44 . . . D 2 -21.107 -1.23 -9.715 0.25 58.41 ? C5' T44 128 B 1 HETATM 15 C C6' T44 . . . D 2 -20.866 -1.476 -8.37 0.25 59.07 ? C6' T44 128 B 1 HETATM 16 N N T44 . . . D 2 -23.357 0.54 -0.288 0.25 58.35 ? N T44 128 B 1 HETATM 17 O O4 T44 . . . D 2 -20.654 -1.019 -6.002 0.25 62.03 ? O4 T44 128 B 1 HETATM 18 O O4' T44 . . . D 2 -21.568 0.325 -11.541 0.25 59.11 ? O4' T44 128 B 1 HETATM 19 O O T44 . . . D 2 -25.217 0.153 -2.643 0.25 57.61 ? O T44 128 B 1 HETATM 20 O OXT T44 . . . D 2 -26.466 1.215 -1.123 0.25 55.75 ? OXT T44 128 B 1 HETATM 21 I I3 T44 . . . D 2 -23.29 0.256 -7.032 0.25 74.65 ? I3 T44 128 B 1 HETATM 22 I I3' T44 . . . D 2 -21.77 3.013 -10.074 0.25 61.28 ? I3' T44 128 B 1 HETATM 23 I I5 T44 . . . D 2 -18.843 -1.22 -2.972 0.25 65.37 ? I5 T44 128 B 1 HETATM 24 I I5' T44 . . . D 2 -21.028 -2.967 -10.887 0.25 57.43 ? I5' T44 128 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #