data_3OZR
#
_model_server_result.job_id            Glk7QUUF1zdiHe9Mnrd3Uw 
_model_server_result.datetime_utc      '2024-10-18 15:21:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ozr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":224}' 
#
_entry.id    3OZR 
#
_exptl.entry_id    3OZR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              340.285 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-[(E)-3-[(2R,3S,4S)-3,4-dihydroxyoxolan-2-yl]prop-2-enyl]-2,3-dihydroxy-5-nitro-benzamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3OZR 
_cell.length_a            50.533 
_cell.length_b            50.533 
_cell.length_c            167.719 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OZR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 141 A ASP 141 1_555 B MG MG . A MG 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? 
metalc ? metalc2 A OD2 ASP 169 A ASP 169 1_555 B MG MG . A MG 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? 
metalc ? metalc3 A OD1 ASN 170 A ASN 170 1_555 B MG MG . A MG 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? 
metalc ? metalc4 B MG MG . A MG 222 1_555 D O21 OZR . A OZR 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
metalc ? metalc5 B MG MG . A MG 222 1_555 D O20 OZR . A OZR 224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? 
metalc ? metalc6 B MG MG . A MG 222 1_555 E O HOH . A HOH 233 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
#
_chem_comp.formula           'C14 H16 N2 O8' 
_chem_comp.formula_weight    340.285 
_chem_comp.id                OZR 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-[(E)-3-[(2R,3S,4S)-3,4-dihydroxyoxolan-2-yl]prop-2-enyl]-2,3-dihydroxy-5-nitro-benzamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 OZR sing 237 n n 
C1 C5 OZR sing 238 n n 
C1 O7 OZR sing 239 n n 
C2 C3 OZR sing 240 n n 
C2 O8 OZR sing 241 n n 
C3 O4 OZR sing 242 n n 
O4 C5 OZR sing 243 n n 
C5 C6 OZR sing 244 n n 
C6 C9 OZR doub 245 n n 
C9 C10 OZR sing 246 n n 
C10 N11 OZR sing 247 n n 
N11 C12 OZR sing 248 n n 
C12 C13 OZR sing 249 n n 
C12 O22 OZR doub 250 e n 
C13 C14 OZR doub 251 n y 
C13 C18 OZR sing 252 n y 
C14 C15 OZR sing 253 n y 
C14 O20 OZR sing 254 n n 
C15 C16 OZR doub 255 n y 
C15 O21 OZR sing 256 n n 
C16 C17 OZR sing 257 n y 
C17 C18 OZR doub 258 n y 
C17 N19 OZR sing 259 n n 
N19 O23 OZR doub 260 n n 
N19 O24 OZR sing 261 n n 
C1 H1 OZR sing 262 n n 
C2 H2 OZR sing 263 n n 
C3 H3 OZR sing 264 n n 
C3 H3A OZR sing 265 n n 
C5 H5 OZR sing 266 n n 
C6 H6 OZR sing 267 n n 
O7 HO7 OZR sing 268 n n 
O8 HO8 OZR sing 269 n n 
C9 H9 OZR sing 270 n n 
C10 H10 OZR sing 271 n n 
C10 H10A OZR sing 272 n n 
N11 HN11 OZR sing 273 n n 
C16 H16 OZR sing 274 n n 
C18 H18 OZR sing 275 n n 
O20 HO20 OZR sing 276 n n 
O21 HO21 OZR sing 277 n n 
#
_atom_sites.entry_id                     3OZR 
_atom_sites.fract_transf_matrix[1][1]    0.019789 
_atom_sites.fract_transf_matrix[1][2]    0.011425 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02285 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005962 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 222 1 MG MG . 
C 3 CL A 1 223 1 CL CL . 
D 4 OZR A 1 224 1 OZR UNL . 
E 5 HOH A 1 225 1 HOH HOH . 
E 5 HOH A 2 226 2 HOH HOH . 
E 5 HOH A 3 227 3 HOH HOH . 
E 5 HOH A 4 228 4 HOH HOH . 
E 5 HOH A 5 229 5 HOH HOH . 
E 5 HOH A 6 230 6 HOH HOH . 
E 5 HOH A 7 231 7 HOH HOH . 
E 5 HOH A 8 232 8 HOH HOH . 
E 5 HOH A 9 233 9 HOH HOH . 
E 5 HOH A 10 234 10 HOH HOH . 
E 5 HOH A 11 235 11 HOH HOH . 
E 5 HOH A 12 236 12 HOH HOH . 
E 5 HOH A 13 237 13 HOH HOH . 
E 5 HOH A 14 238 14 HOH HOH . 
E 5 HOH A 15 239 15 HOH HOH . 
E 5 HOH A 16 240 16 HOH HOH . 
E 5 HOH A 17 241 17 HOH HOH . 
E 5 HOH A 18 242 18 HOH HOH . 
E 5 HOH A 19 243 19 HOH HOH . 
E 5 HOH A 20 244 20 HOH HOH . 
E 5 HOH A 21 245 21 HOH HOH . 
E 5 HOH A 22 246 22 HOH HOH . 
E 5 HOH A 23 247 23 HOH HOH . 
E 5 HOH A 24 248 24 HOH HOH . 
E 5 HOH A 25 249 25 HOH HOH . 
E 5 HOH A 26 250 26 HOH HOH . 
E 5 HOH A 27 251 27 HOH HOH . 
E 5 HOH A 28 252 28 HOH HOH . 
E 5 HOH A 29 253 29 HOH HOH . 
E 5 HOH A 30 254 30 HOH HOH . 
E 5 HOH A 31 255 31 HOH HOH . 
E 5 HOH A 32 256 32 HOH HOH . 
E 5 HOH A 33 257 33 HOH HOH . 
E 5 HOH A 34 258 34 HOH HOH . 
E 5 HOH A 35 259 35 HOH HOH . 
E 5 HOH A 36 260 36 HOH HOH . 
E 5 HOH A 37 261 37 HOH HOH . 
E 5 HOH A 38 262 38 HOH HOH . 
E 5 HOH A 39 263 39 HOH HOH . 
E 5 HOH A 40 264 40 HOH HOH . 
E 5 HOH A 41 265 41 HOH HOH . 
E 5 HOH A 42 266 42 HOH HOH . 
E 5 HOH A 43 267 43 HOH HOH . 
E 5 HOH A 44 268 44 HOH HOH . 
E 5 HOH A 45 269 45 HOH HOH . 
E 5 HOH A 46 270 46 HOH HOH . 
E 5 HOH A 47 271 47 HOH HOH . 
E 5 HOH A 48 272 48 HOH HOH . 
E 5 HOH A 49 273 49 HOH HOH . 
E 5 HOH A 50 274 50 HOH HOH . 
E 5 HOH A 51 275 51 HOH HOH . 
E 5 HOH A 52 276 52 HOH HOH . 
E 5 HOH A 53 277 53 HOH HOH . 
E 5 HOH A 54 278 54 HOH HOH . 
E 5 HOH A 55 279 55 HOH HOH . 
E 5 HOH A 56 280 56 HOH HOH . 
E 5 HOH A 57 281 57 HOH HOH . 
E 5 HOH A 58 282 58 HOH HOH . 
E 5 HOH A 59 283 59 HOH HOH . 
E 5 HOH A 60 284 60 HOH HOH . 
E 5 HOH A 61 285 61 HOH HOH . 
E 5 HOH A 62 286 62 HOH HOH . 
E 5 HOH A 63 287 63 HOH HOH . 
E 5 HOH A 64 288 64 HOH HOH . 
E 5 HOH A 65 289 65 HOH HOH . 
E 5 HOH A 66 290 66 HOH HOH . 
E 5 HOH A 67 291 67 HOH HOH . 
E 5 HOH A 68 292 68 HOH HOH . 
E 5 HOH A 69 293 69 HOH HOH . 
E 5 HOH A 70 294 70 HOH HOH . 
E 5 HOH A 71 295 71 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 OZR . . . D 4 -20.171 30.313 13.417 1 77.95 ? C1 OZR 224 A 1 
HETATM 2 C C2 OZR . . . D 4 -21.015 31.148 14.428 1 72.56 ? C2 OZR 224 A 1 
HETATM 3 C C3 OZR . . . D 4 -21.894 31.96 13.46 1 80 ? C3 OZR 224 A 1 
HETATM 4 O O4 OZR . . . D 4 -21.08 32.213 12.291 1 72.4 ? O4 OZR 224 A 1 
HETATM 5 C C5 OZR . . . D 4 -19.887 31.384 12.322 1 70.87 ? C5 OZR 224 A 1 
HETATM 6 C C6 OZR . . . D 4 -19.609 30.701 11.02 1 61.65 ? C6 OZR 224 A 1 
HETATM 7 O O7 OZR . . . D 4 -18.93 29.713 13.808 1 60.45 ? O7 OZR 224 A 1 
HETATM 8 O O8 OZR . . . D 4 -20.155 32.021 15.137 1 75.42 ? O8 OZR 224 A 1 
HETATM 9 C C9 OZR . . . D 4 -20.53 30.53 10.071 1 50.61 ? C9 OZR 224 A 1 
HETATM 10 C C10 OZR . . . D 4 -20.222 29.838 8.792 1 44.24 ? C10 OZR 224 A 1 
HETATM 11 N N11 OZR . . . D 4 -21.333 29.086 8.273 1 41.66 ? N11 OZR 224 A 1 
HETATM 12 C C12 OZR . . . D 4 -22.152 29.643 7.349 1 42.08 ? C12 OZR 224 A 1 
HETATM 13 C C13 OZR . . . D 4 -23.259 28.855 6.74 1 40.74 ? C13 OZR 224 A 1 
HETATM 14 C C14 OZR . . . D 4 -23.312 27.451 6.925 1 37.02 ? C14 OZR 224 A 1 
HETATM 15 C C15 OZR . . . D 4 -24.372 26.735 6.365 1 36.59 ? C15 OZR 224 A 1 
HETATM 16 C C16 OZR . . . D 4 -25.363 27.359 5.6 1 40.31 ? C16 OZR 224 A 1 
HETATM 17 C C17 OZR . . . D 4 -25.283 28.76 5.437 1 48.59 ? C17 OZR 224 A 1 
HETATM 18 C C18 OZR . . . D 4 -24.262 29.499 6.005 1 37.22 ? C18 OZR 224 A 1 
HETATM 19 N N19 OZR . . . D 4 -26.275 29.541 4.682 1 53.48 ? N19 OZR 224 A 1 
HETATM 20 O O20 OZR . . . D 4 -22.38 26.739 7.604 1 36.99 ? O20 OZR 224 A 1 
HETATM 21 O O21 OZR . . . D 4 -24.463 25.368 6.5 1 38.42 ? O21 OZR 224 A 1 
HETATM 22 O O22 OZR . . . D 4 -22.005 30.84 7.022 1 43.99 ? O22 OZR 224 A 1 
HETATM 23 O O23 OZR . . . D 4 -27.114 29.005 3.992 1 61.12 ? O23 OZR 224 A 1 
HETATM 24 O O24 OZR . . . D 4 -26.178 30.73 4.801 1 67.43 ? O24 OZR 224 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           24 
#