data_3P1E
#
_model_server_result.job_id            dYUpyfcjPZfrqwcLBTqjWQ 
_model_server_result.datetime_utc      '2024-11-29 13:11:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3p1e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1198}' 
#
_entry.id    3P1E 
#
_exptl.entry_id    3P1E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3P1E 
_cell.length_a            121.85 
_cell.length_b            121.85 
_cell.length_c            40.55 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3P1E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 F K K . B K 1 1_555 H O HOH . B HOH 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.065 ? 
metalc ? metalc2 F K K . B K 1 1_555 B O TRP 87 B TRP 1165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.68 ? 
metalc ? metalc3 F K K . B K 1 1_555 B O LEU 88 B LEU 1166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.961 ? 
metalc ? metalc4 F K K . B K 1 1_555 B O ASN 90 B ASN 1168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     3P1E 
_atom_sites.fract_transf_matrix[1][1]    0.008207 
_atom_sites.fract_transf_matrix[1][2]    0.004738 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009476 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024661 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SCN A 1 1 1 SCN SCN . 
D 3 DMS A 1 1198 1 DMS DMS . 
E 3 DMS B 1 2 2 DMS DMS . 
F 4 K B 1 1 1 K K . 
G 5 HOH A 1 2 2 HOH HOH . 
G 5 HOH A 2 5 5 HOH HOH . 
G 5 HOH A 3 8 8 HOH HOH . 
G 5 HOH A 4 13 13 HOH HOH . 
G 5 HOH A 5 14 14 HOH HOH . 
G 5 HOH A 6 15 15 HOH HOH . 
G 5 HOH A 7 16 16 HOH HOH . 
G 5 HOH A 8 17 17 HOH HOH . 
G 5 HOH A 9 18 18 HOH HOH . 
G 5 HOH A 10 19 19 HOH HOH . 
G 5 HOH A 11 20 20 HOH HOH . 
G 5 HOH A 12 21 21 HOH HOH . 
G 5 HOH A 13 23 23 HOH HOH . 
G 5 HOH A 14 26 26 HOH HOH . 
G 5 HOH A 15 28 28 HOH HOH . 
G 5 HOH A 16 29 29 HOH HOH . 
G 5 HOH A 17 30 30 HOH HOH . 
G 5 HOH A 18 33 33 HOH HOH . 
G 5 HOH A 19 34 34 HOH HOH . 
G 5 HOH A 20 35 35 HOH HOH . 
G 5 HOH A 21 36 36 HOH HOH . 
G 5 HOH A 22 38 38 HOH HOH . 
G 5 HOH A 23 41 41 HOH HOH . 
G 5 HOH A 24 43 43 HOH HOH . 
G 5 HOH A 25 45 45 HOH HOH . 
G 5 HOH A 26 47 47 HOH HOH . 
G 5 HOH A 27 48 48 HOH HOH . 
G 5 HOH A 28 50 50 HOH HOH . 
G 5 HOH A 29 52 52 HOH HOH . 
G 5 HOH A 30 53 53 HOH HOH . 
G 5 HOH A 31 54 54 HOH HOH . 
G 5 HOH A 32 56 56 HOH HOH . 
G 5 HOH A 33 57 57 HOH HOH . 
G 5 HOH A 34 61 61 HOH HOH . 
G 5 HOH A 35 64 64 HOH HOH . 
G 5 HOH A 36 65 65 HOH HOH . 
G 5 HOH A 37 69 69 HOH HOH . 
G 5 HOH A 38 70 70 HOH HOH . 
G 5 HOH A 39 71 71 HOH HOH . 
G 5 HOH A 40 72 72 HOH HOH . 
G 5 HOH A 41 73 73 HOH HOH . 
G 5 HOH A 42 76 76 HOH HOH . 
G 5 HOH A 43 78 78 HOH HOH . 
G 5 HOH A 44 79 79 HOH HOH . 
G 5 HOH A 45 84 84 HOH HOH . 
G 5 HOH A 46 86 86 HOH HOH . 
G 5 HOH A 47 87 87 HOH HOH . 
G 5 HOH A 48 88 88 HOH HOH . 
G 5 HOH A 49 89 89 HOH HOH . 
G 5 HOH A 50 91 91 HOH HOH . 
G 5 HOH A 51 92 92 HOH HOH . 
G 5 HOH A 52 94 94 HOH HOH . 
G 5 HOH A 53 96 96 HOH HOH . 
G 5 HOH A 54 97 97 HOH HOH . 
G 5 HOH A 55 99 99 HOH HOH . 
G 5 HOH A 56 100 100 HOH HOH . 
G 5 HOH A 57 101 101 HOH HOH . 
G 5 HOH A 58 103 103 HOH HOH . 
G 5 HOH A 59 106 106 HOH HOH . 
G 5 HOH A 60 110 110 HOH HOH . 
G 5 HOH A 61 111 111 HOH HOH . 
G 5 HOH A 62 114 114 HOH HOH . 
G 5 HOH A 63 116 116 HOH HOH . 
G 5 HOH A 64 120 120 HOH HOH . 
G 5 HOH A 65 124 124 HOH HOH . 
G 5 HOH A 66 127 127 HOH HOH . 
G 5 HOH A 67 132 132 HOH HOH . 
G 5 HOH A 68 133 133 HOH HOH . 
G 5 HOH A 69 135 135 HOH HOH . 
G 5 HOH A 70 137 137 HOH HOH . 
G 5 HOH A 71 138 138 HOH HOH . 
G 5 HOH A 72 142 142 HOH HOH . 
G 5 HOH A 73 143 143 HOH HOH . 
G 5 HOH A 74 147 147 HOH HOH . 
G 5 HOH A 75 148 148 HOH HOH . 
G 5 HOH A 76 151 151 HOH HOH . 
G 5 HOH A 77 153 153 HOH HOH . 
G 5 HOH A 78 154 154 HOH HOH . 
G 5 HOH A 79 155 155 HOH HOH . 
G 5 HOH A 80 158 158 HOH HOH . 
G 5 HOH A 81 159 159 HOH HOH . 
G 5 HOH A 82 161 161 HOH HOH . 
G 5 HOH A 83 162 162 HOH HOH . 
G 5 HOH A 84 164 164 HOH HOH . 
G 5 HOH A 85 165 165 HOH HOH . 
G 5 HOH A 86 166 166 HOH HOH . 
G 5 HOH A 87 167 167 HOH HOH . 
G 5 HOH A 88 168 168 HOH HOH . 
G 5 HOH A 89 172 172 HOH HOH . 
G 5 HOH A 90 173 173 HOH HOH . 
G 5 HOH A 91 177 177 HOH HOH . 
G 5 HOH A 92 182 182 HOH HOH . 
G 5 HOH A 93 183 183 HOH HOH . 
G 5 HOH A 94 184 184 HOH HOH . 
G 5 HOH A 95 185 185 HOH HOH . 
G 5 HOH A 96 186 186 HOH HOH . 
G 5 HOH A 97 187 187 HOH HOH . 
G 5 HOH A 98 188 188 HOH HOH . 
G 5 HOH A 99 189 189 HOH HOH . 
G 5 HOH A 100 190 190 HOH HOH . 
G 5 HOH A 101 191 191 HOH HOH . 
G 5 HOH A 102 192 192 HOH HOH . 
G 5 HOH A 103 193 193 HOH HOH . 
G 5 HOH A 104 194 194 HOH HOH . 
G 5 HOH A 105 195 195 HOH HOH . 
G 5 HOH A 106 196 196 HOH HOH . 
G 5 HOH A 107 197 197 HOH HOH . 
G 5 HOH A 108 198 198 HOH HOH . 
G 5 HOH A 109 199 199 HOH HOH . 
G 5 HOH A 110 200 200 HOH HOH . 
G 5 HOH A 111 201 201 HOH HOH . 
G 5 HOH A 112 202 202 HOH HOH . 
G 5 HOH A 113 203 203 HOH HOH . 
G 5 HOH A 114 204 204 HOH HOH . 
G 5 HOH A 115 205 205 HOH HOH . 
G 5 HOH A 116 206 206 HOH HOH . 
G 5 HOH A 117 207 207 HOH HOH . 
G 5 HOH A 118 208 208 HOH HOH . 
G 5 HOH A 119 209 209 HOH HOH . 
G 5 HOH A 120 210 210 HOH HOH . 
G 5 HOH A 121 215 215 HOH HOH . 
G 5 HOH A 122 218 218 HOH HOH . 
H 5 HOH B 1 7 7 HOH HOH . 
H 5 HOH B 2 10 10 HOH HOH . 
H 5 HOH B 3 11 11 HOH HOH . 
H 5 HOH B 4 12 12 HOH HOH . 
H 5 HOH B 5 27 27 HOH HOH . 
H 5 HOH B 6 31 31 HOH HOH . 
H 5 HOH B 7 32 32 HOH HOH . 
H 5 HOH B 8 37 37 HOH HOH . 
H 5 HOH B 9 39 39 HOH HOH . 
H 5 HOH B 10 40 40 HOH HOH . 
H 5 HOH B 11 42 42 HOH HOH . 
H 5 HOH B 12 51 51 HOH HOH . 
H 5 HOH B 13 55 55 HOH HOH . 
H 5 HOH B 14 59 59 HOH HOH . 
H 5 HOH B 15 60 60 HOH HOH . 
H 5 HOH B 16 62 62 HOH HOH . 
H 5 HOH B 17 63 63 HOH HOH . 
H 5 HOH B 18 66 66 HOH HOH . 
H 5 HOH B 19 68 68 HOH HOH . 
H 5 HOH B 20 77 77 HOH HOH . 
H 5 HOH B 21 81 81 HOH HOH . 
H 5 HOH B 22 82 82 HOH HOH . 
H 5 HOH B 23 83 83 HOH HOH . 
H 5 HOH B 24 85 85 HOH HOH . 
H 5 HOH B 25 90 90 HOH HOH . 
H 5 HOH B 26 93 93 HOH HOH . 
H 5 HOH B 27 102 102 HOH HOH . 
H 5 HOH B 28 104 104 HOH HOH . 
H 5 HOH B 29 105 105 HOH HOH . 
H 5 HOH B 30 112 112 HOH HOH . 
H 5 HOH B 31 113 113 HOH HOH . 
H 5 HOH B 32 117 117 HOH HOH . 
H 5 HOH B 33 118 118 HOH HOH . 
H 5 HOH B 34 119 119 HOH HOH . 
H 5 HOH B 35 121 121 HOH HOH . 
H 5 HOH B 36 123 123 HOH HOH . 
H 5 HOH B 37 125 125 HOH HOH . 
H 5 HOH B 38 126 126 HOH HOH . 
H 5 HOH B 39 128 128 HOH HOH . 
H 5 HOH B 40 131 131 HOH HOH . 
H 5 HOH B 41 139 139 HOH HOH . 
H 5 HOH B 42 141 141 HOH HOH . 
H 5 HOH B 43 144 144 HOH HOH . 
H 5 HOH B 44 152 152 HOH HOH . 
H 5 HOH B 45 163 163 HOH HOH . 
H 5 HOH B 46 174 174 HOH HOH . 
H 5 HOH B 47 175 175 HOH HOH . 
H 5 HOH B 48 176 176 HOH HOH . 
H 5 HOH B 49 178 178 HOH HOH . 
H 5 HOH B 50 179 179 HOH HOH . 
H 5 HOH B 51 180 180 HOH HOH . 
H 5 HOH B 52 181 181 HOH HOH . 
H 5 HOH B 53 211 211 HOH HOH . 
H 5 HOH B 54 212 212 HOH HOH . 
H 5 HOH B 55 213 213 HOH HOH . 
H 5 HOH B 56 214 214 HOH HOH . 
H 5 HOH B 57 217 217 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . D 3 33.521 3.736 39.792 1 31.3 ? S DMS 1198 A 1 
HETATM 2 O O DMS . . . D 3 34.329 5.231 40.236 1 30.69 ? O DMS 1198 A 1 
HETATM 3 C C1 DMS . . . D 3 32.977 2.863 41.301 1 30.04 ? C1 DMS 1198 A 1 
HETATM 4 C C2 DMS . . . D 3 32.01 4.161 38.838 1 31.26 ? C2 DMS 1198 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           366 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#