data_3P1O # _model_server_result.job_id 2_VY1uZZZaRe1Srzp_XpiA _model_server_result.datetime_utc '2024-12-01 14:41:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3p1o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":235}' # _entry.id 3P1O # _exptl.entry_id 3P1O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3P1O _cell.length_a 84.1 _cell.length_b 109.74 _cell.length_c 62.02 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3P1O _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 H N N ? 6 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 41 A SER 37 1_555 A N CSO 42 A CSO 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.352 ? covale ? covale2 A C CSO 42 A CSO 38 1_555 A N GLU 43 A GLU 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale3 B C LYS 4 P LYS 372 1_555 B N SEP 5 P SEP 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 B C SEP 5 P SEP 373 1_555 B N VAL 6 P VAL 374 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? metalc ? metalc1 A OE2 GLU 6 A GLU 2 1_555 F MG MG . A MG 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc2 A O LYS 81 A LYS 77 1_555 G MG MG . A MG 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc3 A OE1 GLU 84 A GLU 80 1_555 G MG MG . A MG 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc4 A OE2 GLU 90 A GLU 86 1_555 H MG MG . A MG 237 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc5 A OE1 GLU 90 A GLU 86 1_555 H MG MG . A MG 237 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.694 ? metalc ? metalc6 A OE2 GLU 93 A GLU 89 1_555 H MG MG . A MG 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc7 A OE2 GLU 192 A GLU 188 1_555 I MG MG . A MG 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc8 A O THR 232 A THR 228 1_555 E CA CA . A CA 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc9 A OXT THR 235 A THR 231 1_555 E CA CA . A CA 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc10 E CA CA . A CA 234 1_555 J O HOH . A HOH 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc11 E CA CA . A CA 234 1_555 J O HOH . A HOH 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc12 F MG MG . A MG 235 1_555 J O HOH . A HOH 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc13 F MG MG . A MG 235 1_555 J O HOH . A HOH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc14 F MG MG . A MG 235 1_555 J O HOH . A HOH 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.555 ? metalc ? metalc15 G MG MG . A MG 236 1_555 J O HOH . A HOH 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc16 G MG MG . A MG 236 1_555 J O HOH . A HOH 387 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc17 H MG MG . A MG 237 1_555 J O HOH . A HOH 372 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc18 H MG MG . A MG 237 1_555 J O HOH . A HOH 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc19 I MG MG . A MG 238 1_555 J O HOH . A HOH 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3P1O _atom_sites.fract_transf_matrix[1][1] 0.011891 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016124 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FSC A 1 232 232 FSC FSC . D 4 CL A 1 233 233 CL CL . E 5 CA A 1 234 234 CA CA . F 6 MG A 1 235 235 MG MG . G 6 MG A 1 236 236 MG MG . H 6 MG A 1 237 237 MG MG . I 6 MG A 1 238 238 MG MG . J 7 HOH A 1 239 239 HOH HOH . J 7 HOH A 2 240 240 HOH HOH . J 7 HOH A 3 241 241 HOH HOH . J 7 HOH A 4 242 242 HOH HOH . J 7 HOH A 5 243 243 HOH HOH . J 7 HOH A 6 244 244 HOH HOH . J 7 HOH A 7 245 245 HOH HOH . J 7 HOH A 8 246 246 HOH HOH . J 7 HOH A 9 247 247 HOH HOH . J 7 HOH A 10 248 248 HOH HOH . J 7 HOH A 11 249 249 HOH HOH . J 7 HOH A 12 250 250 HOH HOH . J 7 HOH A 13 251 251 HOH HOH . J 7 HOH A 14 252 252 HOH HOH . J 7 HOH A 15 253 253 HOH HOH . J 7 HOH A 16 254 254 HOH HOH . J 7 HOH A 17 255 255 HOH HOH . J 7 HOH A 18 256 256 HOH HOH . J 7 HOH A 19 257 257 HOH HOH . J 7 HOH A 20 258 258 HOH HOH . J 7 HOH A 21 259 259 HOH HOH . J 7 HOH A 22 260 260 HOH HOH . J 7 HOH A 23 261 261 HOH HOH . J 7 HOH A 24 262 262 HOH HOH . J 7 HOH A 25 263 263 HOH HOH . J 7 HOH A 26 264 264 HOH HOH . J 7 HOH A 27 265 265 HOH HOH . J 7 HOH A 28 266 266 HOH HOH . J 7 HOH A 29 267 267 HOH HOH . J 7 HOH A 30 268 268 HOH HOH . J 7 HOH A 31 269 269 HOH HOH . J 7 HOH A 32 270 270 HOH HOH . J 7 HOH A 33 271 271 HOH HOH . J 7 HOH A 34 272 272 HOH HOH . J 7 HOH A 35 273 273 HOH HOH . J 7 HOH A 36 274 274 HOH HOH . J 7 HOH A 37 275 275 HOH HOH . J 7 HOH A 38 276 276 HOH HOH . J 7 HOH A 39 277 277 HOH HOH . J 7 HOH A 40 278 278 HOH HOH . J 7 HOH A 41 279 279 HOH HOH . J 7 HOH A 42 280 280 HOH HOH . J 7 HOH A 43 281 281 HOH HOH . J 7 HOH A 44 282 282 HOH HOH . J 7 HOH A 45 283 283 HOH HOH . J 7 HOH A 46 284 284 HOH HOH . J 7 HOH A 47 285 285 HOH HOH . J 7 HOH A 48 286 286 HOH HOH . J 7 HOH A 49 287 287 HOH HOH . J 7 HOH A 50 288 288 HOH HOH . J 7 HOH A 51 289 289 HOH HOH . J 7 HOH A 52 290 290 HOH HOH . J 7 HOH A 53 291 291 HOH HOH . J 7 HOH A 54 292 292 HOH HOH . J 7 HOH A 55 293 293 HOH HOH . J 7 HOH A 56 294 294 HOH HOH . J 7 HOH A 57 295 295 HOH HOH . J 7 HOH A 58 296 296 HOH HOH . J 7 HOH A 59 297 297 HOH HOH . J 7 HOH A 60 298 298 HOH HOH . J 7 HOH A 61 299 299 HOH HOH . J 7 HOH A 62 300 300 HOH HOH . J 7 HOH A 63 301 301 HOH HOH . J 7 HOH A 64 302 302 HOH HOH . J 7 HOH A 65 303 303 HOH HOH . J 7 HOH A 66 304 304 HOH HOH . J 7 HOH A 67 305 305 HOH HOH . J 7 HOH A 68 306 306 HOH HOH . J 7 HOH A 69 307 307 HOH HOH . J 7 HOH A 70 308 308 HOH HOH . J 7 HOH A 71 309 309 HOH HOH . J 7 HOH A 72 310 310 HOH HOH . J 7 HOH A 73 311 311 HOH HOH . J 7 HOH A 74 312 312 HOH HOH . J 7 HOH A 75 313 313 HOH HOH . J 7 HOH A 76 314 314 HOH HOH . J 7 HOH A 77 315 315 HOH HOH . J 7 HOH A 78 316 316 HOH HOH . J 7 HOH A 79 317 317 HOH HOH . J 7 HOH A 80 318 318 HOH HOH . J 7 HOH A 81 319 319 HOH HOH . J 7 HOH A 82 320 320 HOH HOH . J 7 HOH A 83 321 321 HOH HOH . J 7 HOH A 84 322 322 HOH HOH . J 7 HOH A 85 323 323 HOH HOH . J 7 HOH A 86 324 324 HOH HOH . J 7 HOH A 87 325 325 HOH HOH . J 7 HOH A 88 326 326 HOH HOH . J 7 HOH A 89 327 327 HOH HOH . J 7 HOH A 90 328 328 HOH HOH . J 7 HOH A 91 329 329 HOH HOH . J 7 HOH A 92 330 330 HOH HOH . J 7 HOH A 93 331 331 HOH HOH . J 7 HOH A 94 332 332 HOH HOH . J 7 HOH A 95 333 333 HOH HOH . J 7 HOH A 96 334 334 HOH HOH . J 7 HOH A 97 335 335 HOH HOH . J 7 HOH A 98 336 336 HOH HOH . J 7 HOH A 99 337 337 HOH HOH . J 7 HOH A 100 338 338 HOH HOH . J 7 HOH A 101 339 339 HOH HOH . J 7 HOH A 102 340 340 HOH HOH . J 7 HOH A 103 341 341 HOH HOH . J 7 HOH A 104 342 342 HOH HOH . J 7 HOH A 105 343 343 HOH HOH . J 7 HOH A 106 344 344 HOH HOH . J 7 HOH A 107 345 345 HOH HOH . J 7 HOH A 108 346 346 HOH HOH . J 7 HOH A 109 347 347 HOH HOH . J 7 HOH A 110 348 348 HOH HOH . J 7 HOH A 111 349 349 HOH HOH . J 7 HOH A 112 350 350 HOH HOH . J 7 HOH A 113 351 351 HOH HOH . J 7 HOH A 114 352 352 HOH HOH . J 7 HOH A 115 353 353 HOH HOH . J 7 HOH A 116 354 354 HOH HOH . J 7 HOH A 117 355 355 HOH HOH . J 7 HOH A 118 356 356 HOH HOH . J 7 HOH A 119 357 357 HOH HOH . J 7 HOH A 120 358 358 HOH HOH . J 7 HOH A 121 359 359 HOH HOH . J 7 HOH A 122 360 360 HOH HOH . J 7 HOH A 123 361 361 HOH HOH . J 7 HOH A 124 362 362 HOH HOH . J 7 HOH A 125 363 363 HOH HOH . J 7 HOH A 126 364 364 HOH HOH . J 7 HOH A 127 365 365 HOH HOH . J 7 HOH A 128 366 366 HOH HOH . J 7 HOH A 129 367 367 HOH HOH . J 7 HOH A 130 368 368 HOH HOH . J 7 HOH A 131 369 369 HOH HOH . J 7 HOH A 132 370 370 HOH HOH . J 7 HOH A 133 371 371 HOH HOH . J 7 HOH A 134 372 372 HOH HOH . J 7 HOH A 135 373 373 HOH HOH . J 7 HOH A 136 374 374 HOH HOH . J 7 HOH A 137 375 375 HOH HOH . J 7 HOH A 138 376 376 HOH HOH . J 7 HOH A 139 377 377 HOH HOH . J 7 HOH A 140 378 378 HOH HOH . J 7 HOH A 141 379 379 HOH HOH . J 7 HOH A 142 380 380 HOH HOH . J 7 HOH A 143 381 381 HOH HOH . J 7 HOH A 144 382 382 HOH HOH . J 7 HOH A 145 383 383 HOH HOH . J 7 HOH A 146 384 384 HOH HOH . J 7 HOH A 147 385 385 HOH HOH . J 7 HOH A 148 386 386 HOH HOH . J 7 HOH A 149 387 387 HOH HOH . J 7 HOH A 150 388 388 HOH HOH . J 7 HOH A 151 389 389 HOH HOH . J 7 HOH A 152 390 390 HOH HOH . J 7 HOH A 153 391 391 HOH HOH . J 7 HOH A 154 392 392 HOH HOH . J 7 HOH A 155 393 393 HOH HOH . J 7 HOH A 156 394 394 HOH HOH . J 7 HOH A 157 395 395 HOH HOH . J 7 HOH A 158 396 396 HOH HOH . J 7 HOH A 159 397 397 HOH HOH . J 7 HOH A 160 398 398 HOH HOH . J 7 HOH A 161 399 399 HOH HOH . J 7 HOH A 162 400 400 HOH HOH . J 7 HOH A 163 401 401 HOH HOH . J 7 HOH A 164 402 402 HOH HOH . J 7 HOH A 165 403 403 HOH HOH . J 7 HOH A 166 404 404 HOH HOH . J 7 HOH A 167 405 405 HOH HOH . J 7 HOH A 168 406 406 HOH HOH . J 7 HOH A 169 407 407 HOH HOH . J 7 HOH A 170 408 408 HOH HOH . J 7 HOH A 171 409 409 HOH HOH . J 7 HOH A 172 410 410 HOH HOH . J 7 HOH A 173 411 411 HOH HOH . J 7 HOH A 174 412 412 HOH HOH . J 7 HOH A 175 413 413 HOH HOH . J 7 HOH A 176 414 414 HOH HOH . J 7 HOH A 177 415 415 HOH HOH . J 7 HOH A 178 416 416 HOH HOH . J 7 HOH A 179 417 417 HOH HOH . J 7 HOH A 180 418 418 HOH HOH . J 7 HOH A 181 419 419 HOH HOH . J 7 HOH A 182 420 420 HOH HOH . J 7 HOH A 183 421 421 HOH HOH . J 7 HOH A 184 422 422 HOH HOH . J 7 HOH A 185 423 423 HOH HOH . J 7 HOH A 186 424 424 HOH HOH . J 7 HOH A 187 425 425 HOH HOH . J 7 HOH A 188 426 426 HOH HOH . J 7 HOH A 189 427 427 HOH HOH . J 7 HOH A 190 428 428 HOH HOH . J 7 HOH A 191 429 429 HOH HOH . K 7 HOH P 1 375 375 HOH HOH . K 7 HOH P 2 376 376 HOH HOH . K 7 HOH P 3 377 377 HOH HOH . K 7 HOH P 4 378 378 HOH HOH . K 7 HOH P 5 379 379 HOH HOH . K 7 HOH P 6 380 380 HOH HOH . K 7 HOH P 7 381 381 HOH HOH . K 7 HOH P 8 382 382 HOH HOH . K 7 HOH P 9 383 383 HOH HOH . K 7 HOH P 10 384 384 HOH HOH . K 7 HOH P 11 385 385 HOH HOH . K 7 HOH P 12 386 386 HOH HOH . K 7 HOH P 13 387 387 HOH HOH . K 7 HOH P 14 388 388 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 6 _atom_site.Cartn_x -42.306 _atom_site.Cartn_y -21.461 _atom_site.Cartn_z -15.438 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 19.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 235 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #