data_3P2H # _model_server_result.job_id IbHcz_RzRdtAnxUiRuwFPg _model_server_result.datetime_utc '2025-02-05 08:57:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3p2h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":300}' # _entry.id 3P2H # _exptl.entry_id 3P2H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 237.338 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(3-oxocyclohex-1-en-1-yl)octanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3P2H _cell.length_a 66.1 _cell.length_b 66.1 _cell.length_c 104.2 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3P2H _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H23 N O2' _chem_comp.formula_weight 237.338 _chem_comp.id NOO _chem_comp.mon_nstd_flag . _chem_comp.name N-(3-oxocyclohex-1-en-1-yl)octanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 NOO doub 274 n n C1 C2 NOO sing 275 n n C1 C6 NOO sing 276 n n C2 C3 NOO doub 277 n n C3 C4 NOO sing 278 n n C3 N7 NOO sing 279 n n C4 C5 NOO sing 280 n n C5 C6 NOO sing 281 n n N7 C8 NOO sing 282 n n C8 O8 NOO doub 283 n n C8 C9 NOO sing 284 n n C9 C10 NOO sing 285 n n C10 C11 NOO sing 286 n n C11 C12 NOO sing 287 n n C12 C13 NOO sing 288 n n C13 C14 NOO sing 289 n n C14 C15 NOO sing 290 n n C2 H2 NOO sing 291 n n C4 H4 NOO sing 292 n n C4 H4A NOO sing 293 n n C5 H5 NOO sing 294 n n C5 H5A NOO sing 295 n n C6 H6 NOO sing 296 n n C6 H6A NOO sing 297 n n N7 HN7 NOO sing 298 n n C9 H9 NOO sing 299 n n C9 H9A NOO sing 300 n n C10 H10 NOO sing 301 n n C10 H10A NOO sing 302 n n C11 H11 NOO sing 303 n n C11 H11A NOO sing 304 n n C12 H12 NOO sing 305 n n C12 H12A NOO sing 306 n n C13 H13 NOO sing 307 n n C13 H13A NOO sing 308 n n C14 H14 NOO sing 309 n n C14 H14A NOO sing 310 n n C15 H15 NOO sing 311 n n C15 H15A NOO sing 312 n n C15 H15B NOO sing 313 n n # _atom_sites.entry_id 3P2H _atom_sites.fract_transf_matrix[1][1] 0.015129 _atom_sites.fract_transf_matrix[1][2] 0.008734 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017469 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009597 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MTA A 1 204 204 MTA MTA . C 3 NOO A 1 300 300 NOO NOO . D 4 HOH A 1 91 91 HOH HOH . D 4 HOH A 2 92 92 HOH HOH . D 4 HOH A 3 205 205 HOH HOH . D 4 HOH A 4 206 206 HOH HOH . D 4 HOH A 5 207 207 HOH HOH . D 4 HOH A 6 208 208 HOH HOH . D 4 HOH A 7 209 209 HOH HOH . D 4 HOH A 8 210 210 HOH HOH . D 4 HOH A 9 211 211 HOH HOH . D 4 HOH A 10 212 212 HOH HOH . D 4 HOH A 11 213 213 HOH HOH . D 4 HOH A 12 214 214 HOH HOH . D 4 HOH A 13 215 215 HOH HOH . D 4 HOH A 14 216 216 HOH HOH . D 4 HOH A 15 217 217 HOH HOH . D 4 HOH A 16 218 218 HOH HOH . D 4 HOH A 17 219 219 HOH HOH . D 4 HOH A 18 220 220 HOH HOH . D 4 HOH A 19 221 221 HOH HOH . D 4 HOH A 20 222 222 HOH HOH . D 4 HOH A 21 223 223 HOH HOH . D 4 HOH A 22 224 224 HOH HOH . D 4 HOH A 23 225 225 HOH HOH . D 4 HOH A 24 226 226 HOH HOH . D 4 HOH A 25 227 227 HOH HOH . D 4 HOH A 26 228 228 HOH HOH . D 4 HOH A 27 229 229 HOH HOH . D 4 HOH A 28 230 230 HOH HOH . D 4 HOH A 29 231 231 HOH HOH . D 4 HOH A 30 232 232 HOH HOH . D 4 HOH A 31 233 233 HOH HOH . D 4 HOH A 32 234 234 HOH HOH . D 4 HOH A 33 235 235 HOH HOH . D 4 HOH A 34 236 236 HOH HOH . D 4 HOH A 35 237 237 HOH HOH . D 4 HOH A 36 238 238 HOH HOH . D 4 HOH A 37 239 239 HOH HOH . D 4 HOH A 38 240 240 HOH HOH . D 4 HOH A 39 241 241 HOH HOH . D 4 HOH A 40 242 242 HOH HOH . D 4 HOH A 41 243 243 HOH HOH . D 4 HOH A 42 244 244 HOH HOH . D 4 HOH A 43 245 245 HOH HOH . D 4 HOH A 44 246 246 HOH HOH . D 4 HOH A 45 247 247 HOH HOH . D 4 HOH A 46 248 248 HOH HOH . D 4 HOH A 47 249 249 HOH HOH . D 4 HOH A 48 250 250 HOH HOH . D 4 HOH A 49 251 251 HOH HOH . D 4 HOH A 50 252 252 HOH HOH . D 4 HOH A 51 253 253 HOH HOH . D 4 HOH A 52 254 254 HOH HOH . D 4 HOH A 53 255 255 HOH HOH . D 4 HOH A 54 256 256 HOH HOH . D 4 HOH A 55 257 257 HOH HOH . D 4 HOH A 56 258 258 HOH HOH . D 4 HOH A 57 259 259 HOH HOH . D 4 HOH A 58 260 260 HOH HOH . D 4 HOH A 59 261 261 HOH HOH . D 4 HOH A 60 262 262 HOH HOH . D 4 HOH A 61 263 263 HOH HOH . D 4 HOH A 62 264 264 HOH HOH . D 4 HOH A 63 265 265 HOH HOH . D 4 HOH A 64 266 266 HOH HOH . D 4 HOH A 65 267 267 HOH HOH . D 4 HOH A 66 268 268 HOH HOH . D 4 HOH A 67 269 269 HOH HOH . D 4 HOH A 68 270 270 HOH HOH . D 4 HOH A 69 271 271 HOH HOH . D 4 HOH A 70 272 272 HOH HOH . D 4 HOH A 71 273 273 HOH HOH . D 4 HOH A 72 274 274 HOH HOH . D 4 HOH A 73 275 275 HOH HOH . D 4 HOH A 74 276 276 HOH HOH . D 4 HOH A 75 277 277 HOH HOH . D 4 HOH A 76 278 278 HOH HOH . D 4 HOH A 77 279 279 HOH HOH . D 4 HOH A 78 280 280 HOH HOH . D 4 HOH A 79 281 281 HOH HOH . D 4 HOH A 80 282 282 HOH HOH . D 4 HOH A 81 283 283 HOH HOH . D 4 HOH A 82 284 284 HOH HOH . D 4 HOH A 83 285 285 HOH HOH . D 4 HOH A 84 286 286 HOH HOH . D 4 HOH A 85 287 287 HOH HOH . D 4 HOH A 86 288 288 HOH HOH . D 4 HOH A 87 289 289 HOH HOH . D 4 HOH A 88 290 290 HOH HOH . D 4 HOH A 89 291 291 HOH HOH . D 4 HOH A 90 292 292 HOH HOH . D 4 HOH A 91 293 293 HOH HOH . D 4 HOH A 92 294 294 HOH HOH . D 4 HOH A 93 295 295 HOH HOH . D 4 HOH A 94 296 296 HOH HOH . D 4 HOH A 95 297 297 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NOO . . . C 3 0.214 82.04 52.369 1 40.41 ? C1 NOO 300 A 1 HETATM 2 O O1 NOO . . . C 3 -0.236 83.128 52.714 1 41.44 ? O1 NOO 300 A 1 HETATM 3 C C2 NOO . . . C 3 -0.639 80.778 52.334 1 39.87 ? C2 NOO 300 A 1 HETATM 4 C C3 NOO . . . C 3 -0.097 79.505 52.556 1 40.01 ? C3 NOO 300 A 1 HETATM 5 C C4 NOO . . . C 3 1.44 79.39 52.622 1 40.85 ? C4 NOO 300 A 1 HETATM 6 C C5 NOO . . . C 3 2.221 80.459 51.759 1 40.83 ? C5 NOO 300 A 1 HETATM 7 C C6 NOO . . . C 3 1.721 81.92 51.98 1 40.21 ? C6 NOO 300 A 1 HETATM 8 N N7 NOO . . . C 3 -0.866 78.279 52.741 1 39.44 ? N7 NOO 300 A 1 HETATM 9 C C8 NOO . . . C 3 -0.768 76.949 52.254 1 38.91 ? C8 NOO 300 A 1 HETATM 10 O O8 NOO . . . C 3 0.246 76.26 52.308 1 39.35 ? O8 NOO 300 A 1 HETATM 11 C C9 NOO . . . C 3 -2.001 76.279 51.608 1 37.38 ? C9 NOO 300 A 1 HETATM 12 C C10 NOO . . . C 3 -3.403 76.927 51.747 1 37.02 ? C10 NOO 300 A 1 HETATM 13 C C11 NOO . . . C 3 -4.494 75.823 51.691 1 34.23 ? C11 NOO 300 A 1 HETATM 14 C C12 NOO . . . C 3 -5.745 76.263 50.91 1 33.44 ? C12 NOO 300 A 1 HETATM 15 C C13 NOO . . . C 3 -6.852 75.189 50.985 1 31.8 ? C13 NOO 300 A 1 HETATM 16 C C14 NOO . . . C 3 -8.257 75.819 50.943 1 27.57 ? C14 NOO 300 A 1 HETATM 17 C C15 NOO . . . C 3 -9.348 74.756 50.781 1 25.11 ? C15 NOO 300 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 17 #