data_3P2Z
#
_model_server_result.job_id            WMIOKMGmWhybL38BcERyWg 
_model_server_result.datetime_utc      '2024-12-26 14:06:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3p2z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":595}' 
#
_entry.id    3P2Z 
#
_exptl.entry_id    3P2Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.12 
_cell.angle_gamma         90 
_cell.entry_id            3P2Z 
_cell.length_a            34.412 
_cell.length_b            66.863 
_cell.length_c            43.427 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3P2Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C ACE 1 B ACE 73 1_555 B N PRO 2 B PRO 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale2 B C SER 5 B SER 77 1_555 B N TPO 6 B TPO 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale3 B C TPO 6 B TPO 78 1_555 B N ALA 7 B ALA 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale4 B C ALA 7 B ALA 79 1_555 B N NH2 8 B NH2 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.261 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 135 n n 
C1 C2 GOL sing 136 n n 
C1 H11 GOL sing 137 n n 
C1 H12 GOL sing 138 n n 
O1 HO1 GOL sing 139 n n 
C2 O2 GOL sing 140 n n 
C2 C3 GOL sing 141 n n 
C2 H2 GOL sing 142 n n 
O2 HO2 GOL sing 143 n n 
C3 O3 GOL sing 144 n n 
C3 H31 GOL sing 145 n n 
C3 H32 GOL sing 146 n n 
O3 HO3 GOL sing 147 n n 
#
_atom_sites.entry_id                     3P2Z 
_atom_sites.fract_transf_matrix[1][1]    0.02906 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002091 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014956 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.023087 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 595 1 GOL GOL . 
D 4 HOH A 1 10 10 HOH HOH . 
D 4 HOH A 2 12 12 HOH HOH . 
D 4 HOH A 3 13 13 HOH HOH . 
D 4 HOH A 4 15 15 HOH HOH . 
D 4 HOH A 5 16 16 HOH HOH . 
D 4 HOH A 6 17 17 HOH HOH . 
D 4 HOH A 7 18 18 HOH HOH . 
D 4 HOH A 8 19 19 HOH HOH . 
D 4 HOH A 9 20 20 HOH HOH . 
D 4 HOH A 10 21 21 HOH HOH . 
D 4 HOH A 11 22 22 HOH HOH . 
D 4 HOH A 12 24 24 HOH HOH . 
D 4 HOH A 13 26 26 HOH HOH . 
D 4 HOH A 14 27 27 HOH HOH . 
D 4 HOH A 15 28 28 HOH HOH . 
D 4 HOH A 16 29 29 HOH HOH . 
D 4 HOH A 17 30 30 HOH HOH . 
D 4 HOH A 18 31 31 HOH HOH . 
D 4 HOH A 19 32 32 HOH HOH . 
D 4 HOH A 20 33 33 HOH HOH . 
D 4 HOH A 21 34 34 HOH HOH . 
D 4 HOH A 22 35 35 HOH HOH . 
D 4 HOH A 23 36 36 HOH HOH . 
D 4 HOH A 24 37 37 HOH HOH . 
D 4 HOH A 25 38 38 HOH HOH . 
D 4 HOH A 26 39 39 HOH HOH . 
D 4 HOH A 27 40 40 HOH HOH . 
D 4 HOH A 28 41 41 HOH HOH . 
D 4 HOH A 29 42 42 HOH HOH . 
D 4 HOH A 30 43 43 HOH HOH . 
D 4 HOH A 31 44 44 HOH HOH . 
D 4 HOH A 32 45 45 HOH HOH . 
D 4 HOH A 33 46 46 HOH HOH . 
D 4 HOH A 34 47 47 HOH HOH . 
D 4 HOH A 35 48 48 HOH HOH . 
D 4 HOH A 36 49 49 HOH HOH . 
D 4 HOH A 37 50 50 HOH HOH . 
D 4 HOH A 38 51 51 HOH HOH . 
D 4 HOH A 39 52 52 HOH HOH . 
D 4 HOH A 40 53 53 HOH HOH . 
D 4 HOH A 41 54 54 HOH HOH . 
D 4 HOH A 42 55 55 HOH HOH . 
D 4 HOH A 43 56 56 HOH HOH . 
D 4 HOH A 44 57 57 HOH HOH . 
D 4 HOH A 45 58 58 HOH HOH . 
D 4 HOH A 46 59 59 HOH HOH . 
D 4 HOH A 47 60 60 HOH HOH . 
D 4 HOH A 48 61 61 HOH HOH . 
D 4 HOH A 49 62 62 HOH HOH . 
D 4 HOH A 50 64 64 HOH HOH . 
D 4 HOH A 51 65 65 HOH HOH . 
D 4 HOH A 52 66 66 HOH HOH . 
D 4 HOH A 53 67 67 HOH HOH . 
D 4 HOH A 54 68 68 HOH HOH . 
D 4 HOH A 55 69 69 HOH HOH . 
D 4 HOH A 56 70 70 HOH HOH . 
D 4 HOH A 57 71 71 HOH HOH . 
D 4 HOH A 58 72 72 HOH HOH . 
D 4 HOH A 59 73 73 HOH HOH . 
D 4 HOH A 60 74 74 HOH HOH . 
D 4 HOH A 61 75 75 HOH HOH . 
D 4 HOH A 62 76 76 HOH HOH . 
D 4 HOH A 63 77 77 HOH HOH . 
D 4 HOH A 64 78 78 HOH HOH . 
D 4 HOH A 65 79 79 HOH HOH . 
D 4 HOH A 66 82 82 HOH HOH . 
D 4 HOH A 67 83 83 HOH HOH . 
D 4 HOH A 68 85 85 HOH HOH . 
D 4 HOH A 69 86 86 HOH HOH . 
D 4 HOH A 70 88 88 HOH HOH . 
D 4 HOH A 71 90 90 HOH HOH . 
D 4 HOH A 72 91 91 HOH HOH . 
D 4 HOH A 73 92 92 HOH HOH . 
D 4 HOH A 74 93 93 HOH HOH . 
D 4 HOH A 75 94 94 HOH HOH . 
D 4 HOH A 76 95 95 HOH HOH . 
D 4 HOH A 77 96 96 HOH HOH . 
D 4 HOH A 78 97 97 HOH HOH . 
D 4 HOH A 79 98 98 HOH HOH . 
D 4 HOH A 80 99 99 HOH HOH . 
D 4 HOH A 81 101 101 HOH HOH . 
D 4 HOH A 82 103 103 HOH HOH . 
D 4 HOH A 83 104 104 HOH HOH . 
D 4 HOH A 84 105 105 HOH HOH . 
D 4 HOH A 85 107 107 HOH HOH . 
D 4 HOH A 86 108 108 HOH HOH . 
D 4 HOH A 87 109 109 HOH HOH . 
D 4 HOH A 88 111 111 HOH HOH . 
D 4 HOH A 89 112 112 HOH HOH . 
D 4 HOH A 90 113 113 HOH HOH . 
D 4 HOH A 91 114 114 HOH HOH . 
D 4 HOH A 92 115 115 HOH HOH . 
D 4 HOH A 93 117 117 HOH HOH . 
D 4 HOH A 94 118 118 HOH HOH . 
D 4 HOH A 95 119 119 HOH HOH . 
D 4 HOH A 96 121 121 HOH HOH . 
D 4 HOH A 97 124 124 HOH HOH . 
D 4 HOH A 98 125 125 HOH HOH . 
D 4 HOH A 99 126 126 HOH HOH . 
D 4 HOH A 100 129 129 HOH HOH . 
D 4 HOH A 101 131 131 HOH HOH . 
D 4 HOH A 102 132 132 HOH HOH . 
D 4 HOH A 103 133 133 HOH HOH . 
D 4 HOH A 104 134 134 HOH HOH . 
D 4 HOH A 105 135 135 HOH HOH . 
D 4 HOH A 106 136 136 HOH HOH . 
D 4 HOH A 107 137 137 HOH HOH . 
D 4 HOH A 108 138 138 HOH HOH . 
D 4 HOH A 109 139 139 HOH HOH . 
D 4 HOH A 110 142 142 HOH HOH . 
D 4 HOH A 111 143 143 HOH HOH . 
D 4 HOH A 112 144 144 HOH HOH . 
D 4 HOH A 113 146 146 HOH HOH . 
D 4 HOH A 114 149 149 HOH HOH . 
D 4 HOH A 115 150 150 HOH HOH . 
D 4 HOH A 116 153 153 HOH HOH . 
D 4 HOH A 117 155 155 HOH HOH . 
D 4 HOH A 118 157 157 HOH HOH . 
D 4 HOH A 119 158 158 HOH HOH . 
D 4 HOH A 120 161 161 HOH HOH . 
D 4 HOH A 121 162 162 HOH HOH . 
D 4 HOH A 122 163 163 HOH HOH . 
D 4 HOH A 123 165 165 HOH HOH . 
D 4 HOH A 124 167 167 HOH HOH . 
D 4 HOH A 125 168 168 HOH HOH . 
D 4 HOH A 126 169 169 HOH HOH . 
D 4 HOH A 127 170 170 HOH HOH . 
D 4 HOH A 128 172 172 HOH HOH . 
D 4 HOH A 129 596 5 HOH HOH . 
D 4 HOH A 130 597 6 HOH HOH . 
D 4 HOH A 131 598 4 HOH HOH . 
D 4 HOH A 132 599 1 HOH HOH . 
E 4 HOH B 1 2 2 HOH HOH . 
E 4 HOH B 2 3 3 HOH HOH . 
E 4 HOH B 3 7 7 HOH HOH . 
E 4 HOH B 4 8 8 HOH HOH . 
E 4 HOH B 5 9 9 HOH HOH . 
E 4 HOH B 6 11 11 HOH HOH . 
E 4 HOH B 7 23 23 HOH HOH . 
E 4 HOH B 8 87 87 HOH HOH . 
E 4 HOH B 9 89 89 HOH HOH . 
E 4 HOH B 10 127 127 HOH HOH . 
E 4 HOH B 11 152 152 HOH HOH . 
E 4 HOH B 12 156 156 HOH HOH . 
E 4 HOH B 13 159 159 HOH HOH . 
E 4 HOH B 14 166 166 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 16.16 6.819 -8.678 1 38.52 ? C1 GOL 595 A 1 
HETATM 2 O O1 GOL . . . C 3 15.115 6.81 -9.626 1 39.76 ? O1 GOL 595 A 1 
HETATM 3 C C2 GOL . . . C 3 17.434 6.258 -9.297 1 38.3 ? C2 GOL 595 A 1 
HETATM 4 O O2 GOL . . . C 3 17.822 7.073 -10.382 1 38.36 ? O2 GOL 595 A 1 
HETATM 5 C C3 GOL . . . C 3 17.234 4.818 -9.768 1 37.92 ? C3 GOL 595 A 1 
HETATM 6 O O3 GOL . . . C 3 16.371 4.11 -8.903 1 36.51 ? O3 GOL 595 A 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#