data_3P33
#
_model_server_result.job_id            aLaQEFp0RjtbvujehlmYBQ 
_model_server_result.datetime_utc      '2024-12-23 01:14:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3p33 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":100}' 
#
_entry.id    3P33 
#
_exptl.entry_id    3P33 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.111 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PHENOL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3P33 
_cell.length_a            77.9 
_cell.length_b            77.9 
_cell.length_c            78.3 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3P33 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA hexameric 6 author_and_software_defined_assembly 1 
PISA hexameric 6 author_and_software_defined_assembly 2 
PISA hexameric 6 author_and_software_defined_assembly 3 
PISA hexameric 6 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,J,K,U,V 1 1,2,3 
C,D,L,M,N,W,X 2 1,2,3 
E,F,O,P,Q,Y,Z 3 1,2,3 
G,H,R,S,T,AA,BA 4 1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 L N N 
? 3 O N N 
? 3 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf7 E SG CYS 6 E CYS 6 1_555 E SG CYS 11 E CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf8 E SG CYS 7 E CYS 7 1_555 F SG CYS 7 F CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf9 E SG CYS 20 E CYS 20 1_555 F SG CYS 19 F CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf10 G SG CYS 6 G CYS 6 1_555 G SG CYS 11 G CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf11 G SG CYS 7 G CYS 7 1_555 H SG CYS 7 H CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf12 G SG CYS 20 G CYS 20 1_555 H SG CYS 19 H CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 J ZN ZN . B ZN 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? 
metalc ? metalc2 D NE2 HIS 10 D HIS 10 1_555 M ZN ZN . D ZN 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc3 F NE2 HIS 10 F HIS 10 1_555 P ZN ZN . F ZN 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc4 H NE2 HIS 10 H HIS 10 1_555 S ZN ZN . H ZN 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
#
_chem_comp.formula           'C6 H6 O' 
_chem_comp.formula_weight    94.111 
_chem_comp.id                IPH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              PHENOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 IPH doub 158 n y 
C1 C6 IPH sing 159 n y 
C1 O1 IPH sing 160 n n 
C2 C3 IPH sing 161 n y 
C2 H2 IPH sing 162 n n 
C3 C4 IPH doub 163 n y 
C3 H3 IPH sing 164 n n 
C4 C5 IPH sing 165 n y 
C4 H4 IPH sing 166 n n 
C5 C6 IPH doub 167 n y 
C5 H5 IPH sing 168 n n 
C6 H6 IPH sing 169 n n 
O1 HO1 IPH sing 170 n n 
#
_atom_sites.entry_id                     3P33 
_atom_sites.fract_transf_matrix[1][1]    0.012837 
_atom_sites.fract_transf_matrix[1][2]    0.007411 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014823 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012771 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 IPH A 1 100 100 IPH IPH . 
J 4 ZN B 1 31 31 ZN ZN . 
K 5 CL B 1 32 32 CL CL . 
L 3 IPH C 1 200 200 IPH IPH . 
M 4 ZN D 1 31 31 ZN ZN . 
N 5 CL D 1 32 32 CL CL . 
O 3 IPH E 1 300 300 IPH IPH . 
P 4 ZN F 1 31 31 ZN ZN . 
Q 5 CL F 1 32 32 CL CL . 
R 3 IPH G 1 400 400 IPH IPH . 
S 4 ZN H 1 31 31 ZN ZN . 
T 5 CL H 1 32 32 CL CL . 
U 6 HOH A 1 22 2 HOH HOH . 
U 6 HOH A 2 23 8 HOH HOH . 
U 6 HOH A 3 24 11 HOH HOH . 
U 6 HOH A 4 25 20 HOH HOH . 
U 6 HOH A 5 27 27 HOH HOH . 
U 6 HOH A 6 30 30 HOH HOH . 
U 6 HOH A 7 49 49 HOH HOH . 
U 6 HOH A 8 58 58 HOH HOH . 
U 6 HOH A 9 60 60 HOH HOH . 
U 6 HOH A 10 69 69 HOH HOH . 
U 6 HOH A 11 77 77 HOH HOH . 
U 6 HOH A 12 78 78 HOH HOH . 
U 6 HOH A 13 86 86 HOH HOH . 
U 6 HOH A 14 88 88 HOH HOH . 
V 6 HOH B 1 33 12 HOH HOH . 
V 6 HOH B 2 34 14 HOH HOH . 
V 6 HOH B 3 35 17 HOH HOH . 
V 6 HOH B 4 36 19 HOH HOH . 
V 6 HOH B 5 37 26 HOH HOH . 
V 6 HOH B 6 38 28 HOH HOH . 
V 6 HOH B 7 50 50 HOH HOH . 
V 6 HOH B 8 51 51 HOH HOH . 
V 6 HOH B 9 57 57 HOH HOH . 
V 6 HOH B 10 70 70 HOH HOH . 
V 6 HOH B 11 74 74 HOH HOH . 
V 6 HOH B 12 79 79 HOH HOH . 
V 6 HOH B 13 82 82 HOH HOH . 
V 6 HOH B 14 83 83 HOH HOH . 
V 6 HOH B 15 84 84 HOH HOH . 
W 6 HOH C 1 22 9 HOH HOH . 
W 6 HOH C 2 31 31 HOH HOH . 
W 6 HOH C 3 34 34 HOH HOH . 
W 6 HOH C 4 35 35 HOH HOH . 
W 6 HOH C 5 41 41 HOH HOH . 
W 6 HOH C 6 87 87 HOH HOH . 
X 6 HOH D 1 33 4 HOH HOH . 
X 6 HOH D 2 34 6 HOH HOH . 
X 6 HOH D 3 35 7 HOH HOH . 
X 6 HOH D 4 36 18 HOH HOH . 
X 6 HOH D 5 39 39 HOH HOH . 
X 6 HOH D 6 42 42 HOH HOH . 
X 6 HOH D 7 44 44 HOH HOH . 
X 6 HOH D 8 45 45 HOH HOH . 
X 6 HOH D 9 62 62 HOH HOH . 
X 6 HOH D 10 65 65 HOH HOH . 
X 6 HOH D 11 75 75 HOH HOH . 
X 6 HOH D 12 80 80 HOH HOH . 
X 6 HOH D 13 90 90 HOH HOH . 
Y 6 HOH E 1 48 48 HOH HOH . 
Y 6 HOH E 2 53 53 HOH HOH . 
Y 6 HOH E 3 55 55 HOH HOH . 
Y 6 HOH E 4 63 63 HOH HOH . 
Y 6 HOH E 5 68 68 HOH HOH . 
Y 6 HOH E 6 72 72 HOH HOH . 
Z 6 HOH F 1 33 1 HOH HOH . 
Z 6 HOH F 2 34 3 HOH HOH . 
Z 6 HOH F 3 35 5 HOH HOH . 
Z 6 HOH F 4 36 16 HOH HOH . 
Z 6 HOH F 5 37 21 HOH HOH . 
Z 6 HOH F 6 38 22 HOH HOH . 
Z 6 HOH F 7 39 23 HOH HOH . 
Z 6 HOH F 8 40 40 HOH HOH . 
Z 6 HOH F 9 41 24 HOH HOH . 
Z 6 HOH F 10 42 29 HOH HOH . 
Z 6 HOH F 11 43 32 HOH HOH . 
Z 6 HOH F 12 46 46 HOH HOH . 
Z 6 HOH F 13 47 47 HOH HOH . 
Z 6 HOH F 14 56 56 HOH HOH . 
Z 6 HOH F 15 59 59 HOH HOH . 
Z 6 HOH F 16 67 67 HOH HOH . 
Z 6 HOH F 17 73 73 HOH HOH . 
Z 6 HOH F 18 76 76 HOH HOH . 
AA 6 HOH G 1 22 10 HOH HOH . 
AA 6 HOH G 2 23 15 HOH HOH . 
AA 6 HOH G 3 38 38 HOH HOH . 
AA 6 HOH G 4 43 43 HOH HOH . 
AA 6 HOH G 5 64 64 HOH HOH . 
AA 6 HOH G 6 85 85 HOH HOH . 
BA 6 HOH H 1 33 33 HOH HOH . 
BA 6 HOH H 2 34 13 HOH HOH . 
BA 6 HOH H 3 35 25 HOH HOH . 
BA 6 HOH H 4 36 36 HOH HOH . 
BA 6 HOH H 5 37 37 HOH HOH . 
BA 6 HOH H 6 52 52 HOH HOH . 
BA 6 HOH H 7 54 54 HOH HOH . 
BA 6 HOH H 8 61 61 HOH HOH . 
BA 6 HOH H 9 66 66 HOH HOH . 
BA 6 HOH H 10 71 71 HOH HOH . 
BA 6 HOH H 11 81 81 HOH HOH . 
BA 6 HOH H 12 89 89 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 IPH . . . I 3 10.774 -0.435 -17.337 1 28.93 ? C1 IPH 100 A 1 
HETATM 2 C C2 IPH . . . I 3 9.444 -0.949 -17.147 1 25.53 ? C2 IPH 100 A 1 
HETATM 3 C C3 IPH . . . I 3 8.585 -0.921 -18.298 1 20.58 ? C3 IPH 100 A 1 
HETATM 4 C C4 IPH . . . I 3 9.068 -0.407 -19.527 1 23.9 ? C4 IPH 100 A 1 
HETATM 5 C C5 IPH . . . I 3 10.383 0.089 -19.67 1 27.52 ? C5 IPH 100 A 1 
HETATM 6 C C6 IPH . . . I 3 11.283 0.08 -18.536 1 28.73 ? C6 IPH 100 A 1 
HETATM 7 O O1 IPH . . . I 3 11.64 -0.438 -16.251 1 34.54 ? O1 IPH 100 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           7 
#