data_3P36 # _model_server_result.job_id sPZIYZffT-WbGOEsUDpgTg _model_server_result.datetime_utc '2025-03-02 23:41:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3p36 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3P36 # _exptl.entry_id 3P36 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.31 _cell.angle_gamma 90 _cell.entry_id 3P36 _cell.length_a 35.931 _cell.length_b 50.116 _cell.length_c 58.73 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3P36 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C SER 7 B SER 77 1_555 B N TPO 8 B TPO 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale2 B C TPO 8 B TPO 78 1_555 B N ALA 9 B ALA 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale3 B C ALA 9 B ALA 79 1_555 B N NH2 10 B NH2 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.278 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 135 n n C1 C2 GOL sing 136 n n C1 H11 GOL sing 137 n n C1 H12 GOL sing 138 n n O1 HO1 GOL sing 139 n n C2 O2 GOL sing 140 n n C2 C3 GOL sing 141 n n C2 H2 GOL sing 142 n n O2 HO2 GOL sing 143 n n C3 O3 GOL sing 144 n n C3 H31 GOL sing 145 n n C3 H32 GOL sing 146 n n O3 HO3 GOL sing 147 n n # _atom_sites.entry_id 3P36 _atom_sites.fract_transf_matrix[1][1] 0.027831 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004563 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019954 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017254 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 1 1 GOL GOL . D 4 PO4 A 1 595 1 PO4 PO4 . E 5 HOH A 1 3 3 HOH HOH . E 5 HOH A 2 4 4 HOH HOH . E 5 HOH A 3 5 5 HOH HOH . E 5 HOH A 4 8 8 HOH HOH . E 5 HOH A 5 9 9 HOH HOH . E 5 HOH A 6 10 10 HOH HOH . E 5 HOH A 7 12 12 HOH HOH . E 5 HOH A 8 14 14 HOH HOH . E 5 HOH A 9 15 15 HOH HOH . E 5 HOH A 10 17 17 HOH HOH . E 5 HOH A 11 18 18 HOH HOH . E 5 HOH A 12 20 20 HOH HOH . E 5 HOH A 13 21 21 HOH HOH . E 5 HOH A 14 22 22 HOH HOH . E 5 HOH A 15 23 23 HOH HOH . E 5 HOH A 16 24 24 HOH HOH . E 5 HOH A 17 25 25 HOH HOH . E 5 HOH A 18 26 26 HOH HOH . E 5 HOH A 19 28 28 HOH HOH . E 5 HOH A 20 29 29 HOH HOH . E 5 HOH A 21 31 31 HOH HOH . E 5 HOH A 22 32 32 HOH HOH . E 5 HOH A 23 33 33 HOH HOH . E 5 HOH A 24 34 34 HOH HOH . E 5 HOH A 25 35 35 HOH HOH . E 5 HOH A 26 36 36 HOH HOH . E 5 HOH A 27 37 37 HOH HOH . E 5 HOH A 28 38 38 HOH HOH . E 5 HOH A 29 39 39 HOH HOH . E 5 HOH A 30 40 40 HOH HOH . E 5 HOH A 31 41 41 HOH HOH . E 5 HOH A 32 42 42 HOH HOH . E 5 HOH A 33 44 44 HOH HOH . E 5 HOH A 34 45 45 HOH HOH . E 5 HOH A 35 46 46 HOH HOH . E 5 HOH A 36 47 47 HOH HOH . E 5 HOH A 37 48 48 HOH HOH . E 5 HOH A 38 49 49 HOH HOH . E 5 HOH A 39 50 50 HOH HOH . E 5 HOH A 40 51 51 HOH HOH . E 5 HOH A 41 52 52 HOH HOH . E 5 HOH A 42 53 53 HOH HOH . E 5 HOH A 43 54 54 HOH HOH . E 5 HOH A 44 55 55 HOH HOH . E 5 HOH A 45 56 56 HOH HOH . E 5 HOH A 46 57 57 HOH HOH . E 5 HOH A 47 58 58 HOH HOH . E 5 HOH A 48 59 59 HOH HOH . E 5 HOH A 49 60 60 HOH HOH . E 5 HOH A 50 61 61 HOH HOH . E 5 HOH A 51 62 62 HOH HOH . E 5 HOH A 52 63 63 HOH HOH . E 5 HOH A 53 64 64 HOH HOH . E 5 HOH A 54 65 65 HOH HOH . E 5 HOH A 55 66 66 HOH HOH . E 5 HOH A 56 67 67 HOH HOH . E 5 HOH A 57 68 68 HOH HOH . E 5 HOH A 58 69 69 HOH HOH . E 5 HOH A 59 70 70 HOH HOH . E 5 HOH A 60 71 71 HOH HOH . E 5 HOH A 61 72 72 HOH HOH . E 5 HOH A 62 73 73 HOH HOH . E 5 HOH A 63 74 74 HOH HOH . E 5 HOH A 64 75 75 HOH HOH . E 5 HOH A 65 77 77 HOH HOH . E 5 HOH A 66 78 78 HOH HOH . E 5 HOH A 67 79 79 HOH HOH . E 5 HOH A 68 80 80 HOH HOH . E 5 HOH A 69 81 81 HOH HOH . E 5 HOH A 70 82 82 HOH HOH . E 5 HOH A 71 83 83 HOH HOH . E 5 HOH A 72 84 84 HOH HOH . E 5 HOH A 73 86 86 HOH HOH . E 5 HOH A 74 87 87 HOH HOH . E 5 HOH A 75 88 88 HOH HOH . E 5 HOH A 76 89 89 HOH HOH . E 5 HOH A 77 91 91 HOH HOH . E 5 HOH A 78 94 94 HOH HOH . E 5 HOH A 79 95 95 HOH HOH . E 5 HOH A 80 96 96 HOH HOH . E 5 HOH A 81 97 97 HOH HOH . E 5 HOH A 82 98 98 HOH HOH . E 5 HOH A 83 99 99 HOH HOH . E 5 HOH A 84 100 100 HOH HOH . E 5 HOH A 85 101 101 HOH HOH . E 5 HOH A 86 102 102 HOH HOH . E 5 HOH A 87 103 103 HOH HOH . E 5 HOH A 88 104 104 HOH HOH . E 5 HOH A 89 105 105 HOH HOH . E 5 HOH A 90 106 106 HOH HOH . E 5 HOH A 91 108 108 HOH HOH . E 5 HOH A 92 109 109 HOH HOH . E 5 HOH A 93 110 110 HOH HOH . E 5 HOH A 94 111 111 HOH HOH . E 5 HOH A 95 112 112 HOH HOH . E 5 HOH A 96 113 113 HOH HOH . E 5 HOH A 97 114 114 HOH HOH . E 5 HOH A 98 115 115 HOH HOH . E 5 HOH A 99 117 117 HOH HOH . E 5 HOH A 100 118 118 HOH HOH . E 5 HOH A 101 119 119 HOH HOH . E 5 HOH A 102 120 120 HOH HOH . E 5 HOH A 103 121 121 HOH HOH . E 5 HOH A 104 122 122 HOH HOH . E 5 HOH A 105 123 123 HOH HOH . E 5 HOH A 106 124 124 HOH HOH . E 5 HOH A 107 127 127 HOH HOH . E 5 HOH A 108 128 128 HOH HOH . E 5 HOH A 109 129 129 HOH HOH . E 5 HOH A 110 130 130 HOH HOH . E 5 HOH A 111 131 131 HOH HOH . E 5 HOH A 112 132 132 HOH HOH . E 5 HOH A 113 133 133 HOH HOH . E 5 HOH A 114 135 135 HOH HOH . E 5 HOH A 115 136 136 HOH HOH . E 5 HOH A 116 137 137 HOH HOH . E 5 HOH A 117 138 138 HOH HOH . E 5 HOH A 118 139 139 HOH HOH . E 5 HOH A 119 141 141 HOH HOH . E 5 HOH A 120 142 142 HOH HOH . E 5 HOH A 121 144 144 HOH HOH . E 5 HOH A 122 145 145 HOH HOH . E 5 HOH A 123 147 147 HOH HOH . E 5 HOH A 124 149 149 HOH HOH . E 5 HOH A 125 150 150 HOH HOH . E 5 HOH A 126 152 152 HOH HOH . E 5 HOH A 127 153 153 HOH HOH . E 5 HOH A 128 155 155 HOH HOH . E 5 HOH A 129 156 156 HOH HOH . E 5 HOH A 130 157 157 HOH HOH . E 5 HOH A 131 158 158 HOH HOH . E 5 HOH A 132 159 159 HOH HOH . E 5 HOH A 133 160 160 HOH HOH . E 5 HOH A 134 161 161 HOH HOH . E 5 HOH A 135 163 163 HOH HOH . E 5 HOH A 136 166 166 HOH HOH . E 5 HOH A 137 167 167 HOH HOH . E 5 HOH A 138 168 168 HOH HOH . E 5 HOH A 139 170 170 HOH HOH . E 5 HOH A 140 171 171 HOH HOH . E 5 HOH A 141 172 172 HOH HOH . E 5 HOH A 142 173 173 HOH HOH . E 5 HOH A 143 176 176 HOH HOH . E 5 HOH A 144 177 177 HOH HOH . E 5 HOH A 145 178 178 HOH HOH . E 5 HOH A 146 179 179 HOH HOH . E 5 HOH A 147 181 181 HOH HOH . E 5 HOH A 148 182 182 HOH HOH . E 5 HOH A 149 183 183 HOH HOH . E 5 HOH A 150 184 184 HOH HOH . E 5 HOH A 151 185 185 HOH HOH . E 5 HOH A 152 186 186 HOH HOH . E 5 HOH A 153 187 187 HOH HOH . E 5 HOH A 154 189 189 HOH HOH . E 5 HOH A 155 191 191 HOH HOH . E 5 HOH A 156 192 192 HOH HOH . E 5 HOH A 157 193 193 HOH HOH . E 5 HOH A 158 194 194 HOH HOH . E 5 HOH A 159 195 195 HOH HOH . E 5 HOH A 160 197 197 HOH HOH . E 5 HOH A 161 198 198 HOH HOH . E 5 HOH A 162 200 200 HOH HOH . E 5 HOH A 163 201 201 HOH HOH . E 5 HOH A 164 203 203 HOH HOH . E 5 HOH A 165 204 204 HOH HOH . E 5 HOH A 166 205 205 HOH HOH . E 5 HOH A 167 206 206 HOH HOH . E 5 HOH A 168 207 207 HOH HOH . E 5 HOH A 169 208 208 HOH HOH . E 5 HOH A 170 209 209 HOH HOH . E 5 HOH A 171 210 210 HOH HOH . E 5 HOH A 172 212 212 HOH HOH . E 5 HOH A 173 213 213 HOH HOH . E 5 HOH A 174 214 214 HOH HOH . E 5 HOH A 175 215 215 HOH HOH . E 5 HOH A 176 216 216 HOH HOH . E 5 HOH A 177 596 1 HOH HOH . F 5 HOH B 1 6 6 HOH HOH . F 5 HOH B 2 7 7 HOH HOH . F 5 HOH B 3 11 11 HOH HOH . F 5 HOH B 4 13 13 HOH HOH . F 5 HOH B 5 16 16 HOH HOH . F 5 HOH B 6 30 30 HOH HOH . F 5 HOH B 7 81 76 HOH HOH . F 5 HOH B 8 85 85 HOH HOH . F 5 HOH B 9 107 107 HOH HOH . F 5 HOH B 10 116 116 HOH HOH . F 5 HOH B 11 165 165 HOH HOH . F 5 HOH B 12 199 199 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -1.043 -8.856 28.092 1 40.13 ? C1 GOL 1 A 1 HETATM 2 O O1 GOL . . . C 3 -1.016 -8.692 29.476 1 40.71 ? O1 GOL 1 A 1 HETATM 3 C C2 GOL . . . C 3 -1.823 -10.074 27.625 1 41.42 ? C2 GOL 1 A 1 HETATM 4 O O2 GOL . . . C 3 -1.322 -10.42 26.337 1 40.07 ? O2 GOL 1 A 1 HETATM 5 C C3 GOL . . . C 3 -1.948 -11.241 28.611 1 40.73 ? C3 GOL 1 A 1 HETATM 6 O O3 GOL . . . C 3 -0.716 -11.794 29.015 1 41.99 ? O3 GOL 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #