data_3P37
#
_model_server_result.job_id            08NzNS-noYY_G8Ev4yy23Q 
_model_server_result.datetime_utc      '2024-12-22 11:36:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3p37 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":5}' 
#
_entry.id    3P37 
#
_exptl.entry_id    3P37 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          113.48 
_cell.angle_gamma         90 
_cell.entry_id            3P37 
_cell.length_a            58.969 
_cell.length_b            88.658 
_cell.length_c            67.59 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3P37 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,G,H,K,N 1 1 
B,E,I,L,O 2 1 
C,F,J,M,P 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 D C ACE 1 E ACE 70 1_555 D N PHE 2 E PHE 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale2 D C SER 8 E SER 77 1_555 D N TPO 9 E TPO 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale3 D C TPO 9 E TPO 78 1_555 D N ALA 10 E ALA 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale4 E C ACE 1 D ACE 70 1_555 E N PHE 2 D PHE 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale5 E C SER 8 D SER 77 1_555 E N TPO 9 D TPO 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale6 E C TPO 9 D TPO 78 1_555 E N ALA 10 D ALA 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale7 E C ALA 10 D ALA 79 1_555 E N NH2 11 D NH2 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale8 F C ACE 1 F ACE 70 1_555 F N PHE 2 F PHE 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale9 F C SER 8 F SER 77 1_555 F N TPO 9 F TPO 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale10 F C TPO 9 F TPO 78 1_555 F N ALA 10 F ALA 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 135 n n 
C1 C2 GOL sing 136 n n 
C1 H11 GOL sing 137 n n 
C1 H12 GOL sing 138 n n 
O1 HO1 GOL sing 139 n n 
C2 O2 GOL sing 140 n n 
C2 C3 GOL sing 141 n n 
C2 H2 GOL sing 142 n n 
O2 HO2 GOL sing 143 n n 
C3 O3 GOL sing 144 n n 
C3 H31 GOL sing 145 n n 
C3 H32 GOL sing 146 n n 
O3 HO3 GOL sing 147 n n 
#
_atom_sites.entry_id                     3P37 
_atom_sites.fract_transf_matrix[1][1]    0.016958 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007367 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011279 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016131 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 GOL A 1 3 3 GOL GOL . 
H 3 GOL A 1 5 5 GOL GOL . 
I 3 GOL B 1 2 2 GOL GOL . 
J 3 GOL C 1 1 1 GOL GOL . 
K 4 HOH A 1 1 1 HOH HOH . 
K 4 HOH A 2 2 2 HOH HOH . 
K 4 HOH A 3 12 12 HOH HOH . 
K 4 HOH A 4 13 13 HOH HOH . 
K 4 HOH A 5 15 15 HOH HOH . 
K 4 HOH A 6 16 16 HOH HOH . 
K 4 HOH A 7 17 17 HOH HOH . 
K 4 HOH A 8 18 18 HOH HOH . 
K 4 HOH A 9 21 21 HOH HOH . 
K 4 HOH A 10 26 26 HOH HOH . 
K 4 HOH A 11 32 32 HOH HOH . 
K 4 HOH A 12 36 36 HOH HOH . 
K 4 HOH A 13 37 37 HOH HOH . 
K 4 HOH A 14 41 41 HOH HOH . 
K 4 HOH A 15 45 45 HOH HOH . 
K 4 HOH A 16 51 51 HOH HOH . 
K 4 HOH A 17 54 54 HOH HOH . 
K 4 HOH A 18 58 58 HOH HOH . 
K 4 HOH A 19 59 59 HOH HOH . 
K 4 HOH A 20 60 60 HOH HOH . 
K 4 HOH A 21 62 62 HOH HOH . 
K 4 HOH A 22 63 63 HOH HOH . 
K 4 HOH A 23 66 66 HOH HOH . 
K 4 HOH A 24 69 69 HOH HOH . 
K 4 HOH A 25 72 72 HOH HOH . 
K 4 HOH A 26 74 74 HOH HOH . 
K 4 HOH A 27 79 79 HOH HOH . 
K 4 HOH A 28 82 82 HOH HOH . 
K 4 HOH A 29 83 83 HOH HOH . 
K 4 HOH A 30 84 84 HOH HOH . 
K 4 HOH A 31 86 86 HOH HOH . 
K 4 HOH A 32 88 88 HOH HOH . 
K 4 HOH A 33 90 90 HOH HOH . 
K 4 HOH A 34 92 92 HOH HOH . 
K 4 HOH A 35 94 94 HOH HOH . 
K 4 HOH A 36 103 103 HOH HOH . 
K 4 HOH A 37 109 109 HOH HOH . 
K 4 HOH A 38 110 110 HOH HOH . 
K 4 HOH A 39 116 116 HOH HOH . 
K 4 HOH A 40 121 121 HOH HOH . 
K 4 HOH A 41 122 122 HOH HOH . 
K 4 HOH A 42 126 126 HOH HOH . 
K 4 HOH A 43 132 132 HOH HOH . 
K 4 HOH A 44 133 133 HOH HOH . 
K 4 HOH A 45 135 135 HOH HOH . 
K 4 HOH A 46 138 138 HOH HOH . 
K 4 HOH A 47 595 595 HOH HOH . 
K 4 HOH A 48 596 2 HOH HOH . 
L 4 HOH B 1 1 1 HOH HOH . 
L 4 HOH B 2 7 7 HOH HOH . 
L 4 HOH B 3 8 8 HOH HOH . 
L 4 HOH B 4 9 9 HOH HOH . 
L 4 HOH B 5 14 14 HOH HOH . 
L 4 HOH B 6 22 22 HOH HOH . 
L 4 HOH B 7 23 23 HOH HOH . 
L 4 HOH B 8 24 24 HOH HOH . 
L 4 HOH B 9 27 27 HOH HOH . 
L 4 HOH B 10 30 30 HOH HOH . 
L 4 HOH B 11 35 35 HOH HOH . 
L 4 HOH B 12 38 38 HOH HOH . 
L 4 HOH B 13 52 52 HOH HOH . 
L 4 HOH B 14 53 53 HOH HOH . 
L 4 HOH B 15 57 57 HOH HOH . 
L 4 HOH B 16 61 61 HOH HOH . 
L 4 HOH B 17 65 65 HOH HOH . 
L 4 HOH B 18 67 67 HOH HOH . 
L 4 HOH B 19 75 75 HOH HOH . 
L 4 HOH B 20 85 85 HOH HOH . 
L 4 HOH B 21 87 87 HOH HOH . 
L 4 HOH B 22 89 89 HOH HOH . 
L 4 HOH B 23 95 95 HOH HOH . 
L 4 HOH B 24 96 96 HOH HOH . 
L 4 HOH B 25 97 97 HOH HOH . 
L 4 HOH B 26 99 99 HOH HOH . 
L 4 HOH B 27 106 106 HOH HOH . 
L 4 HOH B 28 108 108 HOH HOH . 
L 4 HOH B 29 112 112 HOH HOH . 
L 4 HOH B 30 125 125 HOH HOH . 
L 4 HOH B 31 128 128 HOH HOH . 
L 4 HOH B 32 129 129 HOH HOH . 
L 4 HOH B 33 131 131 HOH HOH . 
L 4 HOH B 34 140 140 HOH HOH . 
L 4 HOH B 35 141 141 HOH HOH . 
M 4 HOH C 1 20 20 HOH HOH . 
M 4 HOH C 2 29 29 HOH HOH . 
M 4 HOH C 3 31 31 HOH HOH . 
M 4 HOH C 4 33 33 HOH HOH . 
M 4 HOH C 5 34 34 HOH HOH . 
M 4 HOH C 6 42 42 HOH HOH . 
M 4 HOH C 7 49 49 HOH HOH . 
M 4 HOH C 8 50 50 HOH HOH . 
M 4 HOH C 9 77 77 HOH HOH . 
M 4 HOH C 10 80 80 HOH HOH . 
M 4 HOH C 11 81 81 HOH HOH . 
M 4 HOH C 12 91 91 HOH HOH . 
M 4 HOH C 13 93 93 HOH HOH . 
M 4 HOH C 14 100 100 HOH HOH . 
M 4 HOH C 15 102 102 HOH HOH . 
M 4 HOH C 16 104 104 HOH HOH . 
M 4 HOH C 17 105 105 HOH HOH . 
M 4 HOH C 18 111 111 HOH HOH . 
M 4 HOH C 19 117 117 HOH HOH . 
M 4 HOH C 20 120 120 HOH HOH . 
M 4 HOH C 21 123 123 HOH HOH . 
M 4 HOH C 22 124 124 HOH HOH . 
M 4 HOH C 23 130 130 HOH HOH . 
N 4 HOH E 1 11 11 HOH HOH . 
N 4 HOH E 2 39 39 HOH HOH . 
N 4 HOH E 3 44 44 HOH HOH . 
O 4 HOH D 1 10 10 HOH HOH . 
O 4 HOH D 2 56 56 HOH HOH . 
O 4 HOH D 3 81 81 HOH HOH . 
O 4 HOH D 4 101 101 HOH HOH . 
O 4 HOH D 5 139 139 HOH HOH . 
P 4 HOH F 1 6 6 HOH HOH . 
P 4 HOH F 2 64 64 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 3 1.18 12.82 20.861 1 40.54 ? C1 GOL 5 A 1 
HETATM 2 O O1 GOL . . . H 3 0.864 13.676 19.781 1 41.14 ? O1 GOL 5 A 1 
HETATM 3 C C2 GOL . . . H 3 1.514 13.622 22.119 1 40.91 ? C2 GOL 5 A 1 
HETATM 4 O O2 GOL . . . H 3 2.011 12.747 23.11 1 40.02 ? O2 GOL 5 A 1 
HETATM 5 C C3 GOL . . . H 3 2.546 14.711 21.824 1 40.82 ? C3 GOL 5 A 1 
HETATM 6 O O3 GOL . . . H 3 3.075 15.213 23.032 1 40.83 ? O3 GOL 5 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           225 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#