data_3P3X # _model_server_result.job_id sZk6vT6xYkb70gZrgugbLA _model_server_result.datetime_utc '2024-11-23 23:36:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3p3x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":408}' # _entry.id 3P3X # _exptl.entry_id 3P3X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3P3X _cell.length_a 129.33 _cell.length_b 131.78 _cell.length_c 53.23 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3P3X _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 365 A CYS 355 1_555 C FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc2 B SG CYS 365 B CYS 355 1_555 G FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc3 G FE HEM . B HEM 501 1_555 L O HOH . B HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 385 n n S O2 SO4 doub 386 n n S O3 SO4 sing 387 n n S O4 SO4 sing 388 n n # _atom_sites.entry_id 3P3X _atom_sites.fract_transf_matrix[1][1] 0.007732 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007588 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018786 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 501 501 HEM HEM . D 3 GOL A 1 407 2 GOL GOL . E 4 SO4 A 1 408 4 SO4 SO4 . F 5 CL A 1 409 5 CL CL . G 2 HEM B 1 501 501 HEM HEM . H 3 GOL B 1 407 1 GOL GOL . I 3 GOL B 1 408 3 GOL GOL . J 5 CL B 1 409 6 CL CL . K 6 HOH A 1 410 1 HOH HOH . K 6 HOH A 2 411 2 HOH HOH . K 6 HOH A 3 412 3 HOH HOH . K 6 HOH A 4 413 4 HOH HOH . K 6 HOH A 5 414 5 HOH HOH . K 6 HOH A 6 415 6 HOH HOH . K 6 HOH A 7 416 7 HOH HOH . K 6 HOH A 8 417 8 HOH HOH . K 6 HOH A 9 418 11 HOH HOH . K 6 HOH A 10 419 12 HOH HOH . K 6 HOH A 11 420 13 HOH HOH . K 6 HOH A 12 421 14 HOH HOH . K 6 HOH A 13 422 15 HOH HOH . K 6 HOH A 14 423 16 HOH HOH . K 6 HOH A 15 424 17 HOH HOH . K 6 HOH A 16 425 18 HOH HOH . K 6 HOH A 17 426 19 HOH HOH . K 6 HOH A 18 427 20 HOH HOH . K 6 HOH A 19 428 21 HOH HOH . K 6 HOH A 20 429 22 HOH HOH . K 6 HOH A 21 430 23 HOH HOH . K 6 HOH A 22 431 25 HOH HOH . K 6 HOH A 23 432 26 HOH HOH . K 6 HOH A 24 433 27 HOH HOH . K 6 HOH A 25 434 28 HOH HOH . K 6 HOH A 26 435 29 HOH HOH . K 6 HOH A 27 436 30 HOH HOH . K 6 HOH A 28 437 31 HOH HOH . K 6 HOH A 29 438 32 HOH HOH . K 6 HOH A 30 439 33 HOH HOH . K 6 HOH A 31 440 35 HOH HOH . K 6 HOH A 32 441 37 HOH HOH . K 6 HOH A 33 442 38 HOH HOH . K 6 HOH A 34 443 39 HOH HOH . K 6 HOH A 35 444 45 HOH HOH . K 6 HOH A 36 445 46 HOH HOH . K 6 HOH A 37 446 47 HOH HOH . K 6 HOH A 38 447 56 HOH HOH . K 6 HOH A 39 448 80 HOH HOH . K 6 HOH A 40 449 82 HOH HOH . K 6 HOH A 41 450 83 HOH HOH . K 6 HOH A 42 451 84 HOH HOH . K 6 HOH A 43 452 85 HOH HOH . K 6 HOH A 44 453 86 HOH HOH . K 6 HOH A 45 454 91 HOH HOH . K 6 HOH A 46 455 95 HOH HOH . K 6 HOH A 47 456 96 HOH HOH . K 6 HOH A 48 457 97 HOH HOH . K 6 HOH A 49 458 101 HOH HOH . K 6 HOH A 50 459 104 HOH HOH . K 6 HOH A 51 460 105 HOH HOH . K 6 HOH A 52 461 110 HOH HOH . K 6 HOH A 53 462 114 HOH HOH . K 6 HOH A 54 463 117 HOH HOH . K 6 HOH A 55 464 118 HOH HOH . K 6 HOH A 56 465 119 HOH HOH . K 6 HOH A 57 466 122 HOH HOH . K 6 HOH A 58 467 127 HOH HOH . K 6 HOH A 59 468 128 HOH HOH . K 6 HOH A 60 469 131 HOH HOH . K 6 HOH A 61 470 133 HOH HOH . K 6 HOH A 62 471 134 HOH HOH . K 6 HOH A 63 472 136 HOH HOH . K 6 HOH A 64 473 137 HOH HOH . K 6 HOH A 65 474 138 HOH HOH . K 6 HOH A 66 475 141 HOH HOH . K 6 HOH A 67 476 142 HOH HOH . K 6 HOH A 68 477 143 HOH HOH . K 6 HOH A 69 478 144 HOH HOH . K 6 HOH A 70 479 145 HOH HOH . K 6 HOH A 71 480 146 HOH HOH . K 6 HOH A 72 481 150 HOH HOH . K 6 HOH A 73 482 152 HOH HOH . K 6 HOH A 74 483 158 HOH HOH . K 6 HOH A 75 484 159 HOH HOH . K 6 HOH A 76 485 160 HOH HOH . K 6 HOH A 77 486 165 HOH HOH . K 6 HOH A 78 487 166 HOH HOH . K 6 HOH A 79 488 172 HOH HOH . K 6 HOH A 80 489 173 HOH HOH . K 6 HOH A 81 490 175 HOH HOH . K 6 HOH A 82 491 176 HOH HOH . K 6 HOH A 83 492 177 HOH HOH . K 6 HOH A 84 493 179 HOH HOH . K 6 HOH A 85 494 182 HOH HOH . K 6 HOH A 86 495 187 HOH HOH . K 6 HOH A 87 496 188 HOH HOH . K 6 HOH A 88 497 189 HOH HOH . K 6 HOH A 89 498 192 HOH HOH . K 6 HOH A 90 499 193 HOH HOH . K 6 HOH A 91 500 196 HOH HOH . K 6 HOH A 92 502 198 HOH HOH . K 6 HOH A 93 503 203 HOH HOH . K 6 HOH A 94 504 205 HOH HOH . K 6 HOH A 95 505 213 HOH HOH . K 6 HOH A 96 506 215 HOH HOH . K 6 HOH A 97 507 216 HOH HOH . K 6 HOH A 98 508 219 HOH HOH . K 6 HOH A 99 509 220 HOH HOH . K 6 HOH A 100 510 221 HOH HOH . K 6 HOH A 101 511 223 HOH HOH . K 6 HOH A 102 512 225 HOH HOH . K 6 HOH A 103 513 226 HOH HOH . K 6 HOH A 104 514 227 HOH HOH . K 6 HOH A 105 515 228 HOH HOH . K 6 HOH A 106 516 233 HOH HOH . K 6 HOH A 107 517 234 HOH HOH . K 6 HOH A 108 518 235 HOH HOH . K 6 HOH A 109 519 236 HOH HOH . K 6 HOH A 110 520 237 HOH HOH . K 6 HOH A 111 521 243 HOH HOH . K 6 HOH A 112 522 246 HOH HOH . K 6 HOH A 113 523 251 HOH HOH . K 6 HOH A 114 524 252 HOH HOH . K 6 HOH A 115 525 253 HOH HOH . L 6 HOH B 1 410 34 HOH HOH . L 6 HOH B 2 411 40 HOH HOH . L 6 HOH B 3 412 41 HOH HOH . L 6 HOH B 4 413 42 HOH HOH . L 6 HOH B 5 414 44 HOH HOH . L 6 HOH B 6 415 48 HOH HOH . L 6 HOH B 7 416 49 HOH HOH . L 6 HOH B 8 417 50 HOH HOH . L 6 HOH B 9 418 51 HOH HOH . L 6 HOH B 10 419 52 HOH HOH . L 6 HOH B 11 420 53 HOH HOH . L 6 HOH B 12 421 54 HOH HOH . L 6 HOH B 13 422 55 HOH HOH . L 6 HOH B 14 423 57 HOH HOH . L 6 HOH B 15 424 58 HOH HOH . L 6 HOH B 16 425 59 HOH HOH . L 6 HOH B 17 426 60 HOH HOH . L 6 HOH B 18 427 61 HOH HOH . L 6 HOH B 19 428 62 HOH HOH . L 6 HOH B 20 429 63 HOH HOH . L 6 HOH B 21 430 64 HOH HOH . L 6 HOH B 22 431 65 HOH HOH . L 6 HOH B 23 432 66 HOH HOH . L 6 HOH B 24 433 67 HOH HOH . L 6 HOH B 25 434 68 HOH HOH . L 6 HOH B 26 435 69 HOH HOH . L 6 HOH B 27 436 70 HOH HOH . L 6 HOH B 28 437 71 HOH HOH . L 6 HOH B 29 438 72 HOH HOH . L 6 HOH B 30 439 73 HOH HOH . L 6 HOH B 31 440 74 HOH HOH . L 6 HOH B 32 441 75 HOH HOH . L 6 HOH B 33 442 76 HOH HOH . L 6 HOH B 34 443 77 HOH HOH . L 6 HOH B 35 444 78 HOH HOH . L 6 HOH B 36 445 79 HOH HOH . L 6 HOH B 37 446 87 HOH HOH . L 6 HOH B 38 447 92 HOH HOH . L 6 HOH B 39 448 99 HOH HOH . L 6 HOH B 40 449 100 HOH HOH . L 6 HOH B 41 450 106 HOH HOH . L 6 HOH B 42 451 107 HOH HOH . L 6 HOH B 43 452 108 HOH HOH . L 6 HOH B 44 453 112 HOH HOH . L 6 HOH B 45 454 113 HOH HOH . L 6 HOH B 46 455 115 HOH HOH . L 6 HOH B 47 456 116 HOH HOH . L 6 HOH B 48 457 121 HOH HOH . L 6 HOH B 49 458 123 HOH HOH . L 6 HOH B 50 459 124 HOH HOH . L 6 HOH B 51 460 129 HOH HOH . L 6 HOH B 52 461 135 HOH HOH . L 6 HOH B 53 462 139 HOH HOH . L 6 HOH B 54 463 149 HOH HOH . L 6 HOH B 55 464 151 HOH HOH . L 6 HOH B 56 465 153 HOH HOH . L 6 HOH B 57 466 155 HOH HOH . L 6 HOH B 58 467 156 HOH HOH . L 6 HOH B 59 468 157 HOH HOH . L 6 HOH B 60 469 161 HOH HOH . L 6 HOH B 61 470 162 HOH HOH . L 6 HOH B 62 471 163 HOH HOH . L 6 HOH B 63 472 167 HOH HOH . L 6 HOH B 64 473 168 HOH HOH . L 6 HOH B 65 474 170 HOH HOH . L 6 HOH B 66 475 171 HOH HOH . L 6 HOH B 67 476 178 HOH HOH . L 6 HOH B 68 477 180 HOH HOH . L 6 HOH B 69 478 183 HOH HOH . L 6 HOH B 70 479 184 HOH HOH . L 6 HOH B 71 480 185 HOH HOH . L 6 HOH B 72 481 190 HOH HOH . L 6 HOH B 73 482 191 HOH HOH . L 6 HOH B 74 483 194 HOH HOH . L 6 HOH B 75 484 197 HOH HOH . L 6 HOH B 76 485 200 HOH HOH . L 6 HOH B 77 486 201 HOH HOH . L 6 HOH B 78 487 204 HOH HOH . L 6 HOH B 79 488 208 HOH HOH . L 6 HOH B 80 489 209 HOH HOH . L 6 HOH B 81 490 210 HOH HOH . L 6 HOH B 82 491 211 HOH HOH . L 6 HOH B 83 492 229 HOH HOH . L 6 HOH B 84 493 230 HOH HOH . L 6 HOH B 85 494 231 HOH HOH . L 6 HOH B 86 495 238 HOH HOH . L 6 HOH B 87 496 239 HOH HOH . L 6 HOH B 88 497 240 HOH HOH . L 6 HOH B 89 498 241 HOH HOH . L 6 HOH B 90 499 242 HOH HOH . L 6 HOH B 91 500 244 HOH HOH . L 6 HOH B 92 502 245 HOH HOH . L 6 HOH B 93 503 250 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . E 4 30.91 -11.43 40.168 1 47.39 ? S SO4 408 A 1 HETATM 2 O O1 SO4 . . . E 4 31.078 -10.007 39.873 1 45.72 ? O1 SO4 408 A 1 HETATM 3 O O2 SO4 . . . E 4 29.501 -11.789 40.031 1 46.97 ? O2 SO4 408 A 1 HETATM 4 O O3 SO4 . . . E 4 31.709 -12.228 39.242 1 48.92 ? O3 SO4 408 A 1 HETATM 5 O O4 SO4 . . . E 4 31.352 -11.696 41.533 1 48.11 ? O4 SO4 408 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #