data_3P4P
#
_model_server_result.job_id            fgJpj904qkUYNx8lkETL6g 
_model_server_result.datetime_utc      '2025-03-21 12:03:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3p4p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":244}' 
#
_entry.id    3P4P 
#
_exptl.entry_id    3P4P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              175.82 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FE2/S2 (INORGANIC) CLUSTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3P4P 
_cell.length_a            96.317 
_cell.length_b            137.633 
_cell.length_c            270.684 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3P4P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,I,J,K,L,M,R,S,T,U 1 1 
E,F,G,H,N,O,P,Q,V,W 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 K N N 
? 7 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 65 B CYS 65 1_555 B SG CYS 77 B CYS 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.825 ? 
metalc ? metalc1 B SG CYS 57 B CYS 57 1_555 K FE2 FES . B FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
metalc ? metalc2 B SG CYS 62 B CYS 62 1_555 K FE2 FES . B FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? 
metalc ? metalc3 B SG CYS 77 B CYS 77 1_555 K FE1 FES . B FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc4 B SG CYS 158 B CYS 158 1_555 L FE4 F3S . B F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? 
metalc ? metalc5 B SG CYS 210 B CYS 210 1_555 L FE3 F3S . B F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? 
metalc ? metalc6 F SG CYS 57 N CYS 57 1_555 O FE2 FES . N FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? 
metalc ? metalc7 F SG CYS 62 N CYS 62 1_555 O FE2 FES . N FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? 
metalc ? metalc8 F SG CYS 65 N CYS 65 1_555 O FE1 FES . N FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? 
metalc ? metalc9 F SG CYS 77 N CYS 77 1_555 O FE1 FES . N FES 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc10 F SG CYS 154 N CYS 154 1_555 Q FE2 SF4 . N SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc11 F SG CYS 158 N CYS 158 1_555 P FE4 F3S . N F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? 
metalc ? metalc12 F SG CYS 204 N CYS 204 1_555 P FE1 F3S . N F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.923 ? 
metalc ? metalc13 F SG CYS 210 N CYS 210 1_555 P FE3 F3S . N F3S 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? 
metalc ? metalc14 F SG CYS 214 N CYS 214 1_555 Q FE4 SF4 . N SF4 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
#
_chem_comp.formula           'Fe2 S2' 
_chem_comp.formula_weight    175.82 
_chem_comp.id                FES 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FE2/S2 (INORGANIC) CLUSTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE1 S1 FES sing 183 n n 
FE1 S2 FES sing 184 n n 
FE2 S1 FES sing 185 n n 
FE2 S2 FES sing 186 n n 
#
_atom_sites.entry_id                     3P4P 
_atom_sites.fract_transf_matrix[1][1]    0.010382 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007266 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003694 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 5 FAD A 1 601 601 FAD FAD . 
J 6 FUM A 1 577 7 FUM FMR . 
K 7 FES B 1 244 244 FES FES . 
L 8 F3S B 1 245 245 F3S F3S . 
M 9 SF4 B 1 246 246 SF4 SF4 . 
N 5 FAD M 1 601 601 FAD FAD . 
O 7 FES N 1 244 244 FES FES . 
P 8 F3S N 1 245 245 F3S F3S . 
Q 9 SF4 N 1 246 246 SF4 SF4 . 
R 10 HOH A 1 578 3 HOH HOH . 
R 10 HOH A 2 579 4 HOH HOH . 
R 10 HOH A 3 580 5 HOH HOH . 
R 10 HOH A 4 581 6 HOH HOH . 
R 10 HOH A 5 582 7 HOH HOH . 
R 10 HOH A 6 583 8 HOH HOH . 
R 10 HOH A 7 584 9 HOH HOH . 
R 10 HOH A 8 585 10 HOH HOH . 
R 10 HOH A 9 586 14 HOH HOH . 
R 10 HOH A 10 587 17 HOH HOH . 
R 10 HOH A 11 588 18 HOH HOH . 
R 10 HOH A 12 589 19 HOH HOH . 
R 10 HOH A 13 590 20 HOH HOH . 
R 10 HOH A 14 591 22 HOH HOH . 
R 10 HOH A 15 592 25 HOH HOH . 
R 10 HOH A 16 593 26 HOH HOH . 
R 10 HOH A 17 594 27 HOH HOH . 
R 10 HOH A 18 595 28 HOH HOH . 
R 10 HOH A 19 596 29 HOH HOH . 
R 10 HOH A 20 597 30 HOH HOH . 
R 10 HOH A 21 598 31 HOH HOH . 
R 10 HOH A 22 599 32 HOH HOH . 
R 10 HOH A 23 600 33 HOH HOH . 
R 10 HOH A 24 602 35 HOH HOH . 
R 10 HOH A 25 603 36 HOH HOH . 
R 10 HOH A 26 604 37 HOH HOH . 
R 10 HOH A 27 605 38 HOH HOH . 
R 10 HOH A 28 606 39 HOH HOH . 
R 10 HOH A 29 607 40 HOH HOH . 
R 10 HOH A 30 608 41 HOH HOH . 
R 10 HOH A 31 609 42 HOH HOH . 
R 10 HOH A 32 610 43 HOH HOH . 
R 10 HOH A 33 611 44 HOH HOH . 
R 10 HOH A 34 612 45 HOH HOH . 
R 10 HOH A 35 613 48 HOH HOH . 
R 10 HOH A 36 614 49 HOH HOH . 
R 10 HOH A 37 615 50 HOH HOH . 
R 10 HOH A 38 616 51 HOH HOH . 
R 10 HOH A 39 617 52 HOH HOH . 
R 10 HOH A 40 618 53 HOH HOH . 
R 10 HOH A 41 619 54 HOH HOH . 
R 10 HOH A 42 620 55 HOH HOH . 
R 10 HOH A 43 621 56 HOH HOH . 
R 10 HOH A 44 622 57 HOH HOH . 
R 10 HOH A 45 623 58 HOH HOH . 
R 10 HOH A 46 624 60 HOH HOH . 
R 10 HOH A 47 625 61 HOH HOH . 
R 10 HOH A 48 626 62 HOH HOH . 
R 10 HOH A 49 627 63 HOH HOH . 
R 10 HOH A 50 628 64 HOH HOH . 
R 10 HOH A 51 629 65 HOH HOH . 
R 10 HOH A 52 630 66 HOH HOH . 
R 10 HOH A 53 631 68 HOH HOH . 
R 10 HOH A 54 632 69 HOH HOH . 
R 10 HOH A 55 633 70 HOH HOH . 
R 10 HOH A 56 634 72 HOH HOH . 
R 10 HOH A 57 635 73 HOH HOH . 
R 10 HOH A 58 636 75 HOH HOH . 
R 10 HOH A 59 637 76 HOH HOH . 
R 10 HOH A 60 638 77 HOH HOH . 
S 10 HOH B 1 247 1 HOH HOH . 
S 10 HOH B 2 248 2 HOH HOH . 
S 10 HOH B 3 249 11 HOH HOH . 
S 10 HOH B 4 250 12 HOH HOH . 
S 10 HOH B 5 251 15 HOH HOH . 
S 10 HOH B 6 252 23 HOH HOH . 
S 10 HOH B 7 253 46 HOH HOH . 
S 10 HOH B 8 254 47 HOH HOH . 
S 10 HOH B 9 255 59 HOH HOH . 
S 10 HOH B 10 256 67 HOH HOH . 
T 10 HOH C 1 131 13 HOH HOH . 
T 10 HOH C 2 132 34 HOH HOH . 
U 10 HOH D 1 119 21 HOH HOH . 
U 10 HOH D 2 120 24 HOH HOH . 
U 10 HOH D 3 121 71 HOH HOH . 
U 10 HOH D 4 122 79 HOH HOH . 
V 10 HOH M 1 577 78 HOH HOH . 
W 10 HOH N 1 247 16 HOH HOH . 
W 10 HOH N 2 248 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE1 FES . . . K 7 6.858 27.323 -30.328 1 98.1 ? FE1 FES 244 B 1 
HETATM 2 FE FE2 FES . . . K 7 8.172 26.465 -28.063 1 107.31 ? FE2 FES 244 B 1 
HETATM 3 S S1 FES . . . K 7 8.703 26.232 -30.131 1 110.29 ? S1 FES 244 B 1 
HETATM 4 S S2 FES . . . K 7 6.07 26.878 -28.392 1 114.78 ? S2 FES 244 B 1 
#
_model_server_stats.io_time_ms              110 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           564 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#