data_3P4W
#
_model_server_result.job_id            4YD-rzo-7nNTiMgIp-WzRw 
_model_server_result.datetime_utc      '2024-11-21 15:16:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3p4w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":501}' 
#
_entry.id    3P4W 
#
_exptl.entry_id    3P4W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          102.13 
_cell.angle_gamma         90 
_cell.entry_id            3P4W 
_cell.length_a            181.12 
_cell.length_b            132.37 
_cell.length_c            159.69 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3P4W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 F N N 
? 2 G N N 
? 2 K N N 
? 2 O N N 
? 2 P N N 
? 2 W N N 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECYL-BETA-D-MALTOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1B C2B LMT sing 205 n n 
C1B O1B LMT sing 206 n n 
C1B O5B LMT sing 207 n n 
C1B H1B LMT sing 208 n n 
C2B C3B LMT sing 209 n n 
C2B O2B LMT sing 210 n n 
C2B H2B LMT sing 211 n n 
C3B C4B LMT sing 212 n n 
C3B O3B LMT sing 213 n n 
C3B H3B LMT sing 214 n n 
C4B C5B LMT sing 215 n n 
C4B O4' LMT sing 216 n n 
C4B H4B LMT sing 217 n n 
C5B C6B LMT sing 218 n n 
C5B O5B LMT sing 219 n n 
C5B H5B LMT sing 220 n n 
C6B O6B LMT sing 221 n n 
C6B "H6'2" LMT sing 222 n n 
C6B "H6'1" LMT sing 223 n n 
O1B C4' LMT sing 224 n n 
O2B H2O1 LMT sing 225 n n 
O3B H3O1 LMT sing 226 n n 
O4' H4O1 LMT sing 227 n n 
O6B H6B LMT sing 228 n n 
C1' C2' LMT sing 229 n n 
C1' O1' LMT sing 230 n n 
C1' O5' LMT sing 231 n n 
C1' H1' LMT sing 232 n n 
C2' C3' LMT sing 233 n n 
C2' O2' LMT sing 234 n n 
C2' H2' LMT sing 235 n n 
C3' C4' LMT sing 236 n n 
C3' O3' LMT sing 237 n n 
C3' H3' LMT sing 238 n n 
C4' C5' LMT sing 239 n n 
C4' H4' LMT sing 240 n n 
C5' C6' LMT sing 241 n n 
C5' O5' LMT sing 242 n n 
C5' H5' LMT sing 243 n n 
C6' O6' LMT sing 244 n n 
C6' H6D LMT sing 245 n n 
C6' H6E LMT sing 246 n n 
O1' C1 LMT sing 247 n n 
O2' H2O2 LMT sing 248 n n 
O3' H3O2 LMT sing 249 n n 
O6' H6' LMT sing 250 n n 
C1 C2 LMT sing 251 n n 
C1 H12 LMT sing 252 n n 
C1 H11 LMT sing 253 n n 
C2 C3 LMT sing 254 n n 
C2 H22 LMT sing 255 n n 
C2 H21 LMT sing 256 n n 
C3 C4 LMT sing 257 n n 
C3 H32 LMT sing 258 n n 
C3 H31 LMT sing 259 n n 
C4 C5 LMT sing 260 n n 
C4 H42 LMT sing 261 n n 
C4 H41 LMT sing 262 n n 
C5 C6 LMT sing 263 n n 
C5 H52 LMT sing 264 n n 
C5 H51 LMT sing 265 n n 
C6 C7 LMT sing 266 n n 
C6 H62 LMT sing 267 n n 
C6 H61 LMT sing 268 n n 
C7 C8 LMT sing 269 n n 
C7 H72 LMT sing 270 n n 
C7 H71 LMT sing 271 n n 
C8 C9 LMT sing 272 n n 
C8 H82 LMT sing 273 n n 
C8 H81 LMT sing 274 n n 
C9 C10 LMT sing 275 n n 
C9 H92 LMT sing 276 n n 
C9 H91 LMT sing 277 n n 
C10 C11 LMT sing 278 n n 
C10 H102 LMT sing 279 n n 
C10 H101 LMT sing 280 n n 
C11 C12 LMT sing 281 n n 
C11 H112 LMT sing 282 n n 
C11 H111 LMT sing 283 n n 
C12 H123 LMT sing 284 n n 
C12 H122 LMT sing 285 n n 
C12 H121 LMT sing 286 n n 
#
_atom_sites.entry_id                     3P4W 
_atom_sites.fract_transf_matrix[1][1]    0.005521 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001187 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007555 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006405 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 LMT A 1 501 501 LMT LMT . 
G 2 LMT A 1 502 502 LMT LMT . 
H 3 DSF A 1 319 1 DSF DSF . 
I 4 PLC A 1 320 1 PLC PLC . 
J 4 PLC A 1 321 3 PLC PLC . 
K 2 LMT B 1 501 501 LMT LMT . 
L 3 DSF B 1 319 1 DSF DSF . 
M 4 PLC B 1 320 1 PLC PLC . 
N 4 PLC B 1 321 3 PLC PLC . 
O 2 LMT C 1 501 501 LMT LMT . 
P 2 LMT C 1 319 501 LMT LMT . 
Q 3 DSF C 1 320 1 DSF DSF . 
R 4 PLC C 1 321 1 PLC PLC . 
S 4 PLC C 1 322 3 PLC PLC . 
T 3 DSF D 1 319 1 DSF DSF . 
U 4 PLC D 1 320 1 PLC PLC . 
V 4 PLC D 1 321 3 PLC PLC . 
W 2 LMT E 1 501 501 LMT LMT . 
X 3 DSF E 1 319 1 DSF DSF . 
Y 4 PLC E 1 320 1 PLC PLC . 
Z 4 PLC E 1 321 3 PLC PLC . 
AA 5 HOH A 1 401 401 HOH HOH . 
AA 5 HOH A 2 402 402 HOH HOH . 
AA 5 HOH A 3 403 7 HOH HOH . 
AA 5 HOH A 4 404 404 HOH HOH . 
AA 5 HOH A 5 405 405 HOH HOH . 
AA 5 HOH A 6 406 406 HOH HOH . 
AA 5 HOH A 7 407 407 HOH HOH . 
AA 5 HOH A 8 415 415 HOH HOH . 
AA 5 HOH A 9 417 417 HOH HOH . 
AA 5 HOH A 10 419 419 HOH HOH . 
AA 5 HOH A 11 424 424 HOH HOH . 
AA 5 HOH A 12 425 425 HOH HOH . 
AA 5 HOH A 13 426 426 HOH HOH . 
AA 5 HOH A 14 430 430 HOH HOH . 
BA 5 HOH B 1 401 401 HOH HOH . 
BA 5 HOH B 2 402 402 HOH HOH . 
BA 5 HOH B 3 404 404 HOH HOH . 
BA 5 HOH B 4 405 405 HOH HOH . 
BA 5 HOH B 5 406 406 HOH HOH . 
BA 5 HOH B 6 407 407 HOH HOH . 
BA 5 HOH B 7 408 408 HOH HOH . 
BA 5 HOH B 8 409 5 HOH HOH . 
BA 5 HOH B 9 410 410 HOH HOH . 
BA 5 HOH B 10 411 411 HOH HOH . 
BA 5 HOH B 11 412 6 HOH HOH . 
BA 5 HOH B 12 415 415 HOH HOH . 
BA 5 HOH B 13 417 417 HOH HOH . 
BA 5 HOH B 14 418 418 HOH HOH . 
BA 5 HOH B 15 429 429 HOH HOH . 
BA 5 HOH B 16 430 430 HOH HOH . 
CA 5 HOH C 1 401 401 HOH HOH . 
CA 5 HOH C 2 402 402 HOH HOH . 
CA 5 HOH C 3 405 405 HOH HOH . 
CA 5 HOH C 4 406 406 HOH HOH . 
CA 5 HOH C 5 407 1 HOH HOH . 
CA 5 HOH C 6 408 2 HOH HOH . 
CA 5 HOH C 7 415 415 HOH HOH . 
DA 5 HOH D 1 401 401 HOH HOH . 
DA 5 HOH D 2 402 402 HOH HOH . 
DA 5 HOH D 3 404 404 HOH HOH . 
DA 5 HOH D 4 405 405 HOH HOH . 
DA 5 HOH D 5 406 406 HOH HOH . 
DA 5 HOH D 6 407 404 HOH HOH . 
DA 5 HOH D 7 408 9 HOH HOH . 
EA 5 HOH E 1 402 402 HOH HOH . 
EA 5 HOH E 2 406 406 HOH HOH . 
EA 5 HOH E 3 407 407 HOH HOH . 
EA 5 HOH E 4 408 3 HOH HOH . 
EA 5 HOH E 5 409 4 HOH HOH . 
EA 5 HOH E 6 410 8 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1' LMT . . . O 2 51.501 -32.528 34.783 1 112.49 ? C1' LMT 501 C 1 
HETATM 2 O O1' LMT . . . O 2 52.175 -31.295 35.096 1 113.3 ? O1' LMT 501 C 1 
HETATM 3 C C1 LMT . . . O 2 53.529 -31.511 35.535 1 113.88 ? C1 LMT 501 C 1 
HETATM 4 C C2 LMT . . . O 2 53.932 -31.052 36.988 1 114.53 ? C2 LMT 501 C 1 
HETATM 5 C C3 LMT . . . O 2 52.863 -31.014 38.116 1 115.38 ? C3 LMT 501 C 1 
HETATM 6 C C4 LMT . . . O 2 53.332 -31.647 39.459 1 116.49 ? C4 LMT 501 C 1 
HETATM 7 C C5 LMT . . . O 2 53.785 -30.653 40.533 1 117.45 ? C5 LMT 501 C 1 
HETATM 8 C C6 LMT . . . O 2 53.351 -31.051 41.936 1 118.24 ? C6 LMT 501 C 1 
HETATM 9 C C7 LMT . . . O 2 53.858 -30.056 42.987 1 118.8 ? C7 LMT 501 C 1 
HETATM 10 C C8 LMT . . . O 2 53.549 -30.592 44.385 1 119.08 ? C8 LMT 501 C 1 
HETATM 11 C C9 LMT . . . O 2 53.626 -29.505 45.442 1 119.4 ? C9 LMT 501 C 1 
HETATM 12 C C10 LMT . . . O 2 54.238 -30.061 46.709 1 119.82 ? C10 LMT 501 C 1 
HETATM 13 C C11 LMT . . . O 2 54.36 -28.96 47.73 1 120 ? C11 LMT 501 C 1 
HETATM 14 C C12 LMT . . . O 2 53.586 -29.394 48.955 1 119.74 ? C12 LMT 501 C 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#