data_3P5K
#
_model_server_result.job_id            1Zgz_hh0ku4k7dtBPILigw 
_model_server_result.datetime_utc      '2024-10-20 20:39:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3p5k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":361}' 
#
_entry.id    3P5K 
#
_exptl.entry_id    3P5K 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              292.369 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'octyl beta-D-glucopyranoside' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3P5K 
_cell.length_a            67.95 
_cell.length_b            71.08 
_cell.length_c            75.55 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3P5K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C14 H28 O6' 
_chem_comp.formula_weight    292.369 
_chem_comp.id                BOG 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'octyl beta-D-glucopyranoside' 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 BOG sing 70 n n 
C1 C2 BOG sing 71 n n 
C1 O5 BOG sing 72 n n 
C1 H1 BOG sing 73 n n 
O1 C1' BOG sing 74 n n 
C2 O2 BOG sing 75 n n 
C2 C3 BOG sing 76 n n 
C2 H2 BOG sing 77 n n 
O2 HO2 BOG sing 78 n n 
C3 O3 BOG sing 79 n n 
C3 C4 BOG sing 80 n n 
C3 H3 BOG sing 81 n n 
O3 HO3 BOG sing 82 n n 
C4 O4 BOG sing 83 n n 
C4 C5 BOG sing 84 n n 
C4 H4 BOG sing 85 n n 
O4 HO4 BOG sing 86 n n 
C5 O5 BOG sing 87 n n 
C5 C6 BOG sing 88 n n 
C5 H5 BOG sing 89 n n 
C6 O6 BOG sing 90 n n 
C6 H61 BOG sing 91 n n 
C6 H62 BOG sing 92 n n 
O6 HO6 BOG sing 93 n n 
C1' C2' BOG sing 94 n n 
C1' "H1'1" BOG sing 95 n n 
C1' "H1'2" BOG sing 96 n n 
C2' C3' BOG sing 97 n n 
C2' "H2'1" BOG sing 98 n n 
C2' "H2'2" BOG sing 99 n n 
C3' C4' BOG sing 100 n n 
C3' "H3'1" BOG sing 101 n n 
C3' "H3'2" BOG sing 102 n n 
C4' C5' BOG sing 103 n n 
C4' "H4'1" BOG sing 104 n n 
C4' "H4'2" BOG sing 105 n n 
C5' C6' BOG sing 106 n n 
C5' "H5'1" BOG sing 107 n n 
C5' "H5'2" BOG sing 108 n n 
C6' C7' BOG sing 109 n n 
C6' "H6'1" BOG sing 110 n n 
C6' "H6'2" BOG sing 111 n n 
C7' C8' BOG sing 112 n n 
C7' "H7'1" BOG sing 113 n n 
C7' "H7'2" BOG sing 114 n n 
C8' "H8'1" BOG sing 115 n n 
C8' "H8'2" BOG sing 116 n n 
C8' "H8'3" BOG sing 117 n n 
#
_pdbx_chem_comp_identifier.comp_id            BOG 
_pdbx_chem_comp_identifier.identifier         b-octylglucoside 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     3P5K 
_atom_sites.fract_transf_matrix[1][1]    0.014717 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014069 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013236 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 BOG A 1 361 361 BOG BOG . 
C 3 P5K A 1 362 362 P5K P5K . 
D 4 HOH A 1 363 363 HOH HOH . 
D 4 HOH A 2 364 364 HOH HOH . 
D 4 HOH A 3 365 365 HOH HOH . 
D 4 HOH A 4 366 366 HOH HOH . 
D 4 HOH A 5 367 367 HOH HOH . 
D 4 HOH A 6 368 368 HOH HOH . 
D 4 HOH A 7 369 369 HOH HOH . 
D 4 HOH A 8 370 370 HOH HOH . 
D 4 HOH A 9 371 371 HOH HOH . 
D 4 HOH A 10 372 372 HOH HOH . 
D 4 HOH A 11 373 373 HOH HOH . 
D 4 HOH A 12 374 374 HOH HOH . 
D 4 HOH A 13 375 375 HOH HOH . 
D 4 HOH A 14 376 376 HOH HOH . 
D 4 HOH A 15 377 377 HOH HOH . 
D 4 HOH A 16 378 378 HOH HOH . 
D 4 HOH A 17 379 379 HOH HOH . 
D 4 HOH A 18 380 380 HOH HOH . 
D 4 HOH A 19 381 381 HOH HOH . 
D 4 HOH A 20 382 382 HOH HOH . 
D 4 HOH A 21 383 383 HOH HOH . 
D 4 HOH A 22 384 384 HOH HOH . 
D 4 HOH A 23 385 385 HOH HOH . 
D 4 HOH A 24 386 386 HOH HOH . 
D 4 HOH A 25 387 387 HOH HOH . 
D 4 HOH A 26 388 388 HOH HOH . 
D 4 HOH A 27 389 389 HOH HOH . 
D 4 HOH A 28 390 390 HOH HOH . 
D 4 HOH A 29 391 391 HOH HOH . 
D 4 HOH A 30 392 392 HOH HOH . 
D 4 HOH A 31 393 393 HOH HOH . 
D 4 HOH A 32 394 394 HOH HOH . 
D 4 HOH A 33 395 395 HOH HOH . 
D 4 HOH A 34 396 396 HOH HOH . 
D 4 HOH A 35 397 397 HOH HOH . 
D 4 HOH A 36 398 398 HOH HOH . 
D 4 HOH A 37 399 399 HOH HOH . 
D 4 HOH A 38 400 400 HOH HOH . 
D 4 HOH A 39 401 401 HOH HOH . 
D 4 HOH A 40 402 402 HOH HOH . 
D 4 HOH A 41 403 403 HOH HOH . 
D 4 HOH A 42 404 404 HOH HOH . 
D 4 HOH A 43 405 405 HOH HOH . 
D 4 HOH A 44 406 406 HOH HOH . 
D 4 HOH A 45 407 407 HOH HOH . 
D 4 HOH A 46 408 408 HOH HOH . 
D 4 HOH A 47 409 409 HOH HOH . 
D 4 HOH A 48 410 410 HOH HOH . 
D 4 HOH A 49 411 411 HOH HOH . 
D 4 HOH A 50 412 412 HOH HOH . 
D 4 HOH A 51 413 413 HOH HOH . 
D 4 HOH A 52 414 414 HOH HOH . 
D 4 HOH A 53 415 415 HOH HOH . 
D 4 HOH A 54 416 416 HOH HOH . 
D 4 HOH A 55 417 417 HOH HOH . 
D 4 HOH A 56 418 418 HOH HOH . 
D 4 HOH A 57 419 419 HOH HOH . 
D 4 HOH A 58 420 420 HOH HOH . 
D 4 HOH A 59 421 421 HOH HOH . 
D 4 HOH A 60 422 422 HOH HOH . 
D 4 HOH A 61 423 423 HOH HOH . 
D 4 HOH A 62 424 424 HOH HOH . 
D 4 HOH A 63 425 425 HOH HOH . 
D 4 HOH A 64 426 426 HOH HOH . 
D 4 HOH A 65 427 427 HOH HOH . 
D 4 HOH A 66 428 428 HOH HOH . 
D 4 HOH A 67 429 429 HOH HOH . 
D 4 HOH A 68 430 430 HOH HOH . 
D 4 HOH A 69 431 431 HOH HOH . 
D 4 HOH A 70 432 432 HOH HOH . 
D 4 HOH A 71 433 433 HOH HOH . 
D 4 HOH A 72 434 434 HOH HOH . 
D 4 HOH A 73 435 435 HOH HOH . 
D 4 HOH A 74 436 436 HOH HOH . 
D 4 HOH A 75 437 437 HOH HOH . 
D 4 HOH A 76 438 438 HOH HOH . 
D 4 HOH A 77 439 439 HOH HOH . 
D 4 HOH A 78 440 440 HOH HOH . 
D 4 HOH A 79 441 441 HOH HOH . 
D 4 HOH A 80 442 442 HOH HOH . 
D 4 HOH A 81 443 443 HOH HOH . 
D 4 HOH A 82 444 444 HOH HOH . 
D 4 HOH A 83 445 445 HOH HOH . 
D 4 HOH A 84 446 446 HOH HOH . 
D 4 HOH A 85 447 447 HOH HOH . 
D 4 HOH A 86 448 448 HOH HOH . 
D 4 HOH A 87 449 449 HOH HOH . 
D 4 HOH A 88 450 450 HOH HOH . 
D 4 HOH A 89 451 451 HOH HOH . 
D 4 HOH A 90 452 452 HOH HOH . 
D 4 HOH A 91 453 453 HOH HOH . 
D 4 HOH A 92 454 454 HOH HOH . 
D 4 HOH A 93 455 455 HOH HOH . 
D 4 HOH A 94 456 456 HOH HOH . 
D 4 HOH A 95 457 457 HOH HOH . 
D 4 HOH A 96 458 458 HOH HOH . 
D 4 HOH A 97 459 459 HOH HOH . 
D 4 HOH A 98 460 460 HOH HOH . 
D 4 HOH A 99 461 461 HOH HOH . 
D 4 HOH A 100 462 462 HOH HOH . 
D 4 HOH A 101 463 463 HOH HOH . 
D 4 HOH A 102 464 464 HOH HOH . 
D 4 HOH A 103 465 465 HOH HOH . 
D 4 HOH A 104 466 466 HOH HOH . 
D 4 HOH A 105 467 467 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BOG . . . B 2 28.711 24.908 -6.516 1 39.11 ? C1 BOG 361 A 1 
HETATM 2 O O1 BOG . . . B 2 28.314 25.974 -7.367 1 35.94 ? O1 BOG 361 A 1 
HETATM 3 C C2 BOG . . . B 2 27.909 23.672 -6.805 1 39.52 ? C2 BOG 361 A 1 
HETATM 4 O O2 BOG . . . B 2 26.539 23.985 -6.568 1 38.71 ? O2 BOG 361 A 1 
HETATM 5 C C3 BOG . . . B 2 28.402 22.602 -5.83 1 42.39 ? C3 BOG 361 A 1 
HETATM 6 O O3 BOG . . . B 2 27.654 21.395 -5.871 1 42.31 ? O3 BOG 361 A 1 
HETATM 7 C C4 BOG . . . B 2 29.824 22.256 -6.176 1 43.09 ? C4 BOG 361 A 1 
HETATM 8 O O4 BOG . . . B 2 30.25 21.229 -5.28 1 48.39 ? O4 BOG 361 A 1 
HETATM 9 C C5 BOG . . . B 2 30.682 23.505 -6.079 1 43.74 ? C5 BOG 361 A 1 
HETATM 10 O O5 BOG . . . B 2 30.083 24.618 -6.767 1 42.05 ? O5 BOG 361 A 1 
HETATM 11 C C6 BOG . . . B 2 32.021 23.284 -6.772 1 44.29 ? C6 BOG 361 A 1 
HETATM 12 O O6 BOG . . . B 2 32.956 24.197 -6.208 1 48.61 ? O6 BOG 361 A 1 
HETATM 13 C C1' BOG . . . B 2 28.801 27.241 -6.87 1 37 ? C1' BOG 361 A 1 
HETATM 14 C C2' BOG . . . B 2 27.815 28.056 -6.006 1 35.11 ? C2' BOG 361 A 1 
HETATM 15 C C3' BOG . . . B 2 28.062 29.547 -6.225 1 35.91 ? C3' BOG 361 A 1 
HETATM 16 C C4' BOG . . . B 2 27.093 30.388 -5.406 1 35.66 ? C4' BOG 361 A 1 
HETATM 17 C C5' BOG . . . B 2 27.651 31.774 -5.158 1 41.37 ? C5' BOG 361 A 1 
HETATM 18 C C6' BOG . . . B 2 26.723 32.635 -4.284 1 42.81 ? C6' BOG 361 A 1 
HETATM 19 C C7' BOG . . . B 2 26.806 34.121 -4.666 1 48.74 ? C7' BOG 361 A 1 
HETATM 20 C C8' BOG . . . B 2 27.329 35.078 -3.593 1 49.6 ? C8' BOG 361 A 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           266 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           20 
#