data_3P6L
#
_model_server_result.job_id            LXLaEb9Fjm0hJ44LBoyUkQ 
_model_server_result.datetime_utc      '2024-12-26 11:18:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3p6l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    3P6L 
#
_exptl.entry_id    3P6L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.73 
_cell.angle_gamma         90 
_cell.entry_id            3P6L 
_cell.length_a            82.382 
_cell.length_b            73.014 
_cell.length_c            47.536 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3P6L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,B,C,D,E,F 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 71.099482 0 46.177658 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLY 13 A GLY 35 1_555 A N MSE 14 A MSE 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale2 A C MSE 14 A MSE 36 1_555 A N GLN 15 A GLN 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale3 A C LYS 95 A LYS 117 1_555 A N MSE 96 A MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale4 A C MSE 96 A MSE 118 1_555 A N PHE 97 A PHE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale5 A C ALA 102 A ALA 124 1_555 A N MSE 103 A MSE 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
covale ? covale6 A C MSE 103 A MSE 125 1_555 A N ASP 104 A ASP 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale7 A C GLY 218 A GLY 240 1_555 A N MSE 219 A MSE 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? 
covale ? covale8 A C MSE 219 A MSE 241 1_555 A N LEU 220 A LEU 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 257 n n 
C1 C2 PEG sing 258 n n 
C1 H11 PEG sing 259 n n 
C1 H12 PEG sing 260 n n 
O1 HO1 PEG sing 261 n n 
C2 O2 PEG sing 262 n n 
C2 H21 PEG sing 263 n n 
C2 H22 PEG sing 264 n n 
O2 C3 PEG sing 265 n n 
C3 C4 PEG sing 266 n n 
C3 H31 PEG sing 267 n n 
C3 H32 PEG sing 268 n n 
C4 O4 PEG sing 269 n n 
C4 H41 PEG sing 270 n n 
C4 H42 PEG sing 271 n n 
O4 HO4 PEG sing 272 n n 
#
_atom_sites.entry_id                     3P6L 
_atom_sites.fract_transf_matrix[1][1]    0.012138 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002965 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013696 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.021656 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PO4 A 1 300 300 PO4 PO4 . 
C 3 PEG A 1 301 301 PEG PEG . 
D 3 PEG A 1 302 302 PEG PEG . 
E 4 CIT A 1 303 303 CIT CIT . 
F 5 HOH A 1 304 304 HOH HOH . 
F 5 HOH A 2 305 305 HOH HOH . 
F 5 HOH A 3 306 306 HOH HOH . 
F 5 HOH A 4 307 307 HOH HOH . 
F 5 HOH A 5 308 308 HOH HOH . 
F 5 HOH A 6 309 309 HOH HOH . 
F 5 HOH A 7 310 310 HOH HOH . 
F 5 HOH A 8 311 311 HOH HOH . 
F 5 HOH A 9 312 312 HOH HOH . 
F 5 HOH A 10 313 313 HOH HOH . 
F 5 HOH A 11 314 314 HOH HOH . 
F 5 HOH A 12 315 315 HOH HOH . 
F 5 HOH A 13 316 316 HOH HOH . 
F 5 HOH A 14 317 317 HOH HOH . 
F 5 HOH A 15 318 318 HOH HOH . 
F 5 HOH A 16 319 319 HOH HOH . 
F 5 HOH A 17 320 320 HOH HOH . 
F 5 HOH A 18 321 321 HOH HOH . 
F 5 HOH A 19 322 322 HOH HOH . 
F 5 HOH A 20 323 323 HOH HOH . 
F 5 HOH A 21 324 324 HOH HOH . 
F 5 HOH A 22 325 325 HOH HOH . 
F 5 HOH A 23 326 326 HOH HOH . 
F 5 HOH A 24 327 327 HOH HOH . 
F 5 HOH A 25 328 328 HOH HOH . 
F 5 HOH A 26 329 329 HOH HOH . 
F 5 HOH A 27 330 330 HOH HOH . 
F 5 HOH A 28 331 331 HOH HOH . 
F 5 HOH A 29 332 332 HOH HOH . 
F 5 HOH A 30 333 333 HOH HOH . 
F 5 HOH A 31 334 334 HOH HOH . 
F 5 HOH A 32 335 335 HOH HOH . 
F 5 HOH A 33 336 336 HOH HOH . 
F 5 HOH A 34 337 337 HOH HOH . 
F 5 HOH A 35 338 338 HOH HOH . 
F 5 HOH A 36 339 339 HOH HOH . 
F 5 HOH A 37 340 340 HOH HOH . 
F 5 HOH A 38 341 341 HOH HOH . 
F 5 HOH A 39 342 342 HOH HOH . 
F 5 HOH A 40 343 343 HOH HOH . 
F 5 HOH A 41 344 344 HOH HOH . 
F 5 HOH A 42 345 345 HOH HOH . 
F 5 HOH A 43 346 346 HOH HOH . 
F 5 HOH A 44 347 347 HOH HOH . 
F 5 HOH A 45 348 348 HOH HOH . 
F 5 HOH A 46 349 349 HOH HOH . 
F 5 HOH A 47 350 350 HOH HOH . 
F 5 HOH A 48 351 351 HOH HOH . 
F 5 HOH A 49 352 352 HOH HOH . 
F 5 HOH A 50 353 353 HOH HOH . 
F 5 HOH A 51 354 354 HOH HOH . 
F 5 HOH A 52 355 355 HOH HOH . 
F 5 HOH A 53 356 356 HOH HOH . 
F 5 HOH A 54 357 357 HOH HOH . 
F 5 HOH A 55 358 358 HOH HOH . 
F 5 HOH A 56 359 359 HOH HOH . 
F 5 HOH A 57 360 360 HOH HOH . 
F 5 HOH A 58 361 361 HOH HOH . 
F 5 HOH A 59 362 362 HOH HOH . 
F 5 HOH A 60 363 363 HOH HOH . 
F 5 HOH A 61 364 364 HOH HOH . 
F 5 HOH A 62 365 365 HOH HOH . 
F 5 HOH A 63 366 366 HOH HOH . 
F 5 HOH A 64 367 367 HOH HOH . 
F 5 HOH A 65 368 368 HOH HOH . 
F 5 HOH A 66 369 369 HOH HOH . 
F 5 HOH A 67 370 370 HOH HOH . 
F 5 HOH A 68 371 371 HOH HOH . 
F 5 HOH A 69 372 372 HOH HOH . 
F 5 HOH A 70 373 373 HOH HOH . 
F 5 HOH A 71 374 374 HOH HOH . 
F 5 HOH A 72 375 375 HOH HOH . 
F 5 HOH A 73 376 376 HOH HOH . 
F 5 HOH A 74 377 377 HOH HOH . 
F 5 HOH A 75 378 378 HOH HOH . 
F 5 HOH A 76 379 379 HOH HOH . 
F 5 HOH A 77 380 380 HOH HOH . 
F 5 HOH A 78 381 381 HOH HOH . 
F 5 HOH A 79 382 382 HOH HOH . 
F 5 HOH A 80 383 383 HOH HOH . 
F 5 HOH A 81 384 384 HOH HOH . 
F 5 HOH A 82 385 385 HOH HOH . 
F 5 HOH A 83 386 386 HOH HOH . 
F 5 HOH A 84 387 387 HOH HOH . 
F 5 HOH A 85 388 388 HOH HOH . 
F 5 HOH A 86 389 389 HOH HOH . 
F 5 HOH A 87 390 390 HOH HOH . 
F 5 HOH A 88 391 391 HOH HOH . 
F 5 HOH A 89 392 392 HOH HOH . 
F 5 HOH A 90 393 393 HOH HOH . 
F 5 HOH A 91 394 394 HOH HOH . 
F 5 HOH A 92 395 395 HOH HOH . 
F 5 HOH A 93 396 396 HOH HOH . 
F 5 HOH A 94 397 397 HOH HOH . 
F 5 HOH A 95 398 398 HOH HOH . 
F 5 HOH A 96 399 399 HOH HOH . 
F 5 HOH A 97 400 400 HOH HOH . 
F 5 HOH A 98 401 401 HOH HOH . 
F 5 HOH A 99 402 402 HOH HOH . 
F 5 HOH A 100 403 403 HOH HOH . 
F 5 HOH A 101 404 404 HOH HOH . 
F 5 HOH A 102 405 405 HOH HOH . 
F 5 HOH A 103 406 406 HOH HOH . 
F 5 HOH A 104 407 407 HOH HOH . 
F 5 HOH A 105 408 408 HOH HOH . 
F 5 HOH A 106 409 409 HOH HOH . 
F 5 HOH A 107 410 410 HOH HOH . 
F 5 HOH A 108 411 411 HOH HOH . 
F 5 HOH A 109 412 412 HOH HOH . 
F 5 HOH A 110 413 413 HOH HOH . 
F 5 HOH A 111 414 414 HOH HOH . 
F 5 HOH A 112 415 415 HOH HOH . 
F 5 HOH A 113 416 416 HOH HOH . 
F 5 HOH A 114 417 417 HOH HOH . 
F 5 HOH A 115 418 418 HOH HOH . 
F 5 HOH A 116 419 419 HOH HOH . 
F 5 HOH A 117 420 420 HOH HOH . 
F 5 HOH A 118 421 421 HOH HOH . 
F 5 HOH A 119 422 422 HOH HOH . 
F 5 HOH A 120 423 423 HOH HOH . 
F 5 HOH A 121 424 424 HOH HOH . 
F 5 HOH A 122 425 425 HOH HOH . 
F 5 HOH A 123 426 426 HOH HOH . 
F 5 HOH A 124 427 427 HOH HOH . 
F 5 HOH A 125 428 428 HOH HOH . 
F 5 HOH A 126 429 429 HOH HOH . 
F 5 HOH A 127 430 430 HOH HOH . 
F 5 HOH A 128 431 431 HOH HOH . 
F 5 HOH A 129 432 432 HOH HOH . 
F 5 HOH A 130 433 433 HOH HOH . 
F 5 HOH A 131 434 434 HOH HOH . 
F 5 HOH A 132 435 435 HOH HOH . 
F 5 HOH A 133 436 436 HOH HOH . 
F 5 HOH A 134 437 437 HOH HOH . 
F 5 HOH A 135 438 438 HOH HOH . 
F 5 HOH A 136 439 439 HOH HOH . 
F 5 HOH A 137 440 440 HOH HOH . 
F 5 HOH A 138 441 441 HOH HOH . 
F 5 HOH A 139 442 442 HOH HOH . 
F 5 HOH A 140 443 443 HOH HOH . 
F 5 HOH A 141 444 444 HOH HOH . 
F 5 HOH A 142 445 445 HOH HOH . 
F 5 HOH A 143 446 446 HOH HOH . 
F 5 HOH A 144 447 447 HOH HOH . 
F 5 HOH A 145 448 448 HOH HOH . 
F 5 HOH A 146 449 449 HOH HOH . 
F 5 HOH A 147 450 450 HOH HOH . 
F 5 HOH A 148 451 451 HOH HOH . 
F 5 HOH A 149 452 452 HOH HOH . 
F 5 HOH A 150 453 453 HOH HOH . 
F 5 HOH A 151 454 454 HOH HOH . 
F 5 HOH A 152 455 455 HOH HOH . 
F 5 HOH A 153 456 456 HOH HOH . 
F 5 HOH A 154 457 457 HOH HOH . 
F 5 HOH A 155 458 458 HOH HOH . 
F 5 HOH A 156 459 459 HOH HOH . 
F 5 HOH A 157 460 460 HOH HOH . 
F 5 HOH A 158 461 461 HOH HOH . 
F 5 HOH A 159 462 462 HOH HOH . 
F 5 HOH A 160 463 463 HOH HOH . 
F 5 HOH A 161 464 464 HOH HOH . 
F 5 HOH A 162 465 465 HOH HOH . 
F 5 HOH A 163 466 466 HOH HOH . 
F 5 HOH A 164 467 467 HOH HOH . 
F 5 HOH A 165 468 468 HOH HOH . 
F 5 HOH A 166 469 469 HOH HOH . 
F 5 HOH A 167 470 470 HOH HOH . 
F 5 HOH A 168 471 471 HOH HOH . 
F 5 HOH A 169 472 472 HOH HOH . 
F 5 HOH A 170 473 473 HOH HOH . 
F 5 HOH A 171 474 474 HOH HOH . 
F 5 HOH A 172 475 475 HOH HOH . 
F 5 HOH A 173 476 476 HOH HOH . 
F 5 HOH A 174 477 477 HOH HOH . 
F 5 HOH A 175 478 478 HOH HOH . 
F 5 HOH A 176 479 479 HOH HOH . 
F 5 HOH A 177 480 480 HOH HOH . 
F 5 HOH A 178 481 481 HOH HOH . 
F 5 HOH A 179 482 482 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . D 3 11.702 21.399 11.695 1 50.64 ? C1 PEG 302 A 1 
HETATM 2 O O1 PEG . . . D 3 11.018 22.211 12.66 1 53.13 ? O1 PEG 302 A 1 
HETATM 3 C C2 PEG . . . D 3 10.723 20.394 11.092 1 44.59 ? C2 PEG 302 A 1 
HETATM 4 O O2 PEG . . . D 3 10.773 20.426 9.659 1 45.7 ? O2 PEG 302 A 1 
HETATM 5 C C3 PEG . . . D 3 10.065 21.524 9.094 1 41.26 ? C3 PEG 302 A 1 
HETATM 6 C C4 PEG . . . D 3 9.946 21.355 7.592 1 44.26 ? C4 PEG 302 A 1 
HETATM 7 O O4 PEG . . . D 3 10.352 22.572 6.971 1 46.53 ? O4 PEG 302 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           355 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           7 
#