data_3P7I
#
_model_server_result.job_id            2nTBQv7E4Z4wv-6UkeFmIQ 
_model_server_result.datetime_utc      '2024-11-28 15:01:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3p7i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":314}' 
#
_entry.id    3P7I 
#
_exptl.entry_id    3P7I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3P7I 
_cell.length_a            76.094 
_cell.length_b            82.44 
_cell.length_c            54.667 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3P7I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 116 n n 
C1 C2 GOL sing 117 n n 
C1 H11 GOL sing 118 n n 
C1 H12 GOL sing 119 n n 
O1 HO1 GOL sing 120 n n 
C2 O2 GOL sing 121 n n 
C2 C3 GOL sing 122 n n 
C2 H2 GOL sing 123 n n 
O2 HO2 GOL sing 124 n n 
C3 O3 GOL sing 125 n n 
C3 H31 GOL sing 126 n n 
C3 H32 GOL sing 127 n n 
O3 HO3 GOL sing 128 n n 
#
_atom_sites.entry_id                     3P7I 
_atom_sites.fract_transf_matrix[1][1]    0.013142 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01213 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018293 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 P7I A 1 313 1 P7I P7I . 
C 3 GOL A 1 314 1 GOL GOL . 
D 3 GOL A 1 315 2 GOL GOL . 
E 3 GOL A 1 316 3 GOL GOL . 
F 4 HOH A 1 317 1 HOH HOH . 
F 4 HOH A 2 318 2 HOH HOH . 
F 4 HOH A 3 319 3 HOH HOH . 
F 4 HOH A 4 320 4 HOH HOH . 
F 4 HOH A 5 321 5 HOH HOH . 
F 4 HOH A 6 322 6 HOH HOH . 
F 4 HOH A 7 323 7 HOH HOH . 
F 4 HOH A 8 324 8 HOH HOH . 
F 4 HOH A 9 325 10 HOH HOH . 
F 4 HOH A 10 326 11 HOH HOH . 
F 4 HOH A 11 327 12 HOH HOH . 
F 4 HOH A 12 328 13 HOH HOH . 
F 4 HOH A 13 329 14 HOH HOH . 
F 4 HOH A 14 330 15 HOH HOH . 
F 4 HOH A 15 331 16 HOH HOH . 
F 4 HOH A 16 332 17 HOH HOH . 
F 4 HOH A 17 333 18 HOH HOH . 
F 4 HOH A 18 334 19 HOH HOH . 
F 4 HOH A 19 335 20 HOH HOH . 
F 4 HOH A 20 336 21 HOH HOH . 
F 4 HOH A 21 337 22 HOH HOH . 
F 4 HOH A 22 338 23 HOH HOH . 
F 4 HOH A 23 339 25 HOH HOH . 
F 4 HOH A 24 340 26 HOH HOH . 
F 4 HOH A 25 341 27 HOH HOH . 
F 4 HOH A 26 342 28 HOH HOH . 
F 4 HOH A 27 343 29 HOH HOH . 
F 4 HOH A 28 344 30 HOH HOH . 
F 4 HOH A 29 345 31 HOH HOH . 
F 4 HOH A 30 346 32 HOH HOH . 
F 4 HOH A 31 347 33 HOH HOH . 
F 4 HOH A 32 348 34 HOH HOH . 
F 4 HOH A 33 349 35 HOH HOH . 
F 4 HOH A 34 350 36 HOH HOH . 
F 4 HOH A 35 351 37 HOH HOH . 
F 4 HOH A 36 352 38 HOH HOH . 
F 4 HOH A 37 353 39 HOH HOH . 
F 4 HOH A 38 354 40 HOH HOH . 
F 4 HOH A 39 355 41 HOH HOH . 
F 4 HOH A 40 356 42 HOH HOH . 
F 4 HOH A 41 357 43 HOH HOH . 
F 4 HOH A 42 358 44 HOH HOH . 
F 4 HOH A 43 359 45 HOH HOH . 
F 4 HOH A 44 360 47 HOH HOH . 
F 4 HOH A 45 361 48 HOH HOH . 
F 4 HOH A 46 362 49 HOH HOH . 
F 4 HOH A 47 363 50 HOH HOH . 
F 4 HOH A 48 364 51 HOH HOH . 
F 4 HOH A 49 365 52 HOH HOH . 
F 4 HOH A 50 366 53 HOH HOH . 
F 4 HOH A 51 367 54 HOH HOH . 
F 4 HOH A 52 368 56 HOH HOH . 
F 4 HOH A 53 369 57 HOH HOH . 
F 4 HOH A 54 370 59 HOH HOH . 
F 4 HOH A 55 371 60 HOH HOH . 
F 4 HOH A 56 372 61 HOH HOH . 
F 4 HOH A 57 373 62 HOH HOH . 
F 4 HOH A 58 374 63 HOH HOH . 
F 4 HOH A 59 375 64 HOH HOH . 
F 4 HOH A 60 376 66 HOH HOH . 
F 4 HOH A 61 377 67 HOH HOH . 
F 4 HOH A 62 378 68 HOH HOH . 
F 4 HOH A 63 379 69 HOH HOH . 
F 4 HOH A 64 380 70 HOH HOH . 
F 4 HOH A 65 381 71 HOH HOH . 
F 4 HOH A 66 382 72 HOH HOH . 
F 4 HOH A 67 383 74 HOH HOH . 
F 4 HOH A 68 384 75 HOH HOH . 
F 4 HOH A 69 385 76 HOH HOH . 
F 4 HOH A 70 386 77 HOH HOH . 
F 4 HOH A 71 387 78 HOH HOH . 
F 4 HOH A 72 388 79 HOH HOH . 
F 4 HOH A 73 389 80 HOH HOH . 
F 4 HOH A 74 390 81 HOH HOH . 
F 4 HOH A 75 391 82 HOH HOH . 
F 4 HOH A 76 392 83 HOH HOH . 
F 4 HOH A 77 393 84 HOH HOH . 
F 4 HOH A 78 394 85 HOH HOH . 
F 4 HOH A 79 395 86 HOH HOH . 
F 4 HOH A 80 396 87 HOH HOH . 
F 4 HOH A 81 397 88 HOH HOH . 
F 4 HOH A 82 398 89 HOH HOH . 
F 4 HOH A 83 399 90 HOH HOH . 
F 4 HOH A 84 400 91 HOH HOH . 
F 4 HOH A 85 401 92 HOH HOH . 
F 4 HOH A 86 402 93 HOH HOH . 
F 4 HOH A 87 403 94 HOH HOH . 
F 4 HOH A 88 404 95 HOH HOH . 
F 4 HOH A 89 405 96 HOH HOH . 
F 4 HOH A 90 406 97 HOH HOH . 
F 4 HOH A 91 407 98 HOH HOH . 
F 4 HOH A 92 408 100 HOH HOH . 
F 4 HOH A 93 409 101 HOH HOH . 
F 4 HOH A 94 410 102 HOH HOH . 
F 4 HOH A 95 411 103 HOH HOH . 
F 4 HOH A 96 412 104 HOH HOH . 
F 4 HOH A 97 413 105 HOH HOH . 
F 4 HOH A 98 414 106 HOH HOH . 
F 4 HOH A 99 415 107 HOH HOH . 
F 4 HOH A 100 416 108 HOH HOH . 
F 4 HOH A 101 417 109 HOH HOH . 
F 4 HOH A 102 418 110 HOH HOH . 
F 4 HOH A 103 419 111 HOH HOH . 
F 4 HOH A 104 420 112 HOH HOH . 
F 4 HOH A 105 421 113 HOH HOH . 
F 4 HOH A 106 422 114 HOH HOH . 
F 4 HOH A 107 423 115 HOH HOH . 
F 4 HOH A 108 424 116 HOH HOH . 
F 4 HOH A 109 425 117 HOH HOH . 
F 4 HOH A 110 426 118 HOH HOH . 
F 4 HOH A 111 427 119 HOH HOH . 
F 4 HOH A 112 428 120 HOH HOH . 
F 4 HOH A 113 429 121 HOH HOH . 
F 4 HOH A 114 430 122 HOH HOH . 
F 4 HOH A 115 431 123 HOH HOH . 
F 4 HOH A 116 432 124 HOH HOH . 
F 4 HOH A 117 433 125 HOH HOH . 
F 4 HOH A 118 434 126 HOH HOH . 
F 4 HOH A 119 435 127 HOH HOH . 
F 4 HOH A 120 436 129 HOH HOH . 
F 4 HOH A 121 437 130 HOH HOH . 
F 4 HOH A 122 438 131 HOH HOH . 
F 4 HOH A 123 439 132 HOH HOH . 
F 4 HOH A 124 440 133 HOH HOH . 
F 4 HOH A 125 441 134 HOH HOH . 
F 4 HOH A 126 442 135 HOH HOH . 
F 4 HOH A 127 443 136 HOH HOH . 
F 4 HOH A 128 444 137 HOH HOH . 
F 4 HOH A 129 445 138 HOH HOH . 
F 4 HOH A 130 446 139 HOH HOH . 
F 4 HOH A 131 447 140 HOH HOH . 
F 4 HOH A 132 448 141 HOH HOH . 
F 4 HOH A 133 449 143 HOH HOH . 
F 4 HOH A 134 450 144 HOH HOH . 
F 4 HOH A 135 451 145 HOH HOH . 
F 4 HOH A 136 452 146 HOH HOH . 
F 4 HOH A 137 453 147 HOH HOH . 
F 4 HOH A 138 454 148 HOH HOH . 
F 4 HOH A 139 455 149 HOH HOH . 
F 4 HOH A 140 456 150 HOH HOH . 
F 4 HOH A 141 457 151 HOH HOH . 
F 4 HOH A 142 458 152 HOH HOH . 
F 4 HOH A 143 459 154 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 1.16 -36.929 19.634 1 40.18 ? C1 GOL 314 A 1 
HETATM 2 O O1 GOL . . . C 3 1.474 -35.573 19.419 1 32.46 ? O1 GOL 314 A 1 
HETATM 3 C C2 GOL . . . C 3 2.375 -37.828 19.713 1 38.74 ? C2 GOL 314 A 1 
HETATM 4 O O2 GOL . . . C 3 3.16 -37.437 20.842 1 43.78 ? O2 GOL 314 A 1 
HETATM 5 C C3 GOL . . . C 3 3.215 -37.608 18.496 1 29.94 ? C3 GOL 314 A 1 
HETATM 6 O O3 GOL . . . C 3 2.852 -38.345 17.399 1 35.73 ? O3 GOL 314 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           332 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#