data_3P89 # _model_server_result.job_id OigMljwzEY0KjkyCGGxxrw _model_server_result.datetime_utc '2024-11-04 20:01:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3p89 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":473}' # _entry.id 3P89 # _exptl.entry_id 3P89 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3P89 _cell.length_a 159.911 _cell.length_b 159.911 _cell.length_c 159.911 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3P89 _symmetry.cell_setting ? _symmetry.Int_Tables_number 196 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'F 2 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA hexameric 6 software_defined_assembly 2 PISA 24-meric 24 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2,3 A,B,C,D,E 3 1,4,5,6,7,8,2,9,10,11,12,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 23_566 y,-z+3/2,-x+3/2 0 1 0 0 0 -1 -1 0 0 0 239.8665 239.8665 3 'crystal symmetry operation' 32_656 -z+3/2,x,-y+3/2 0 0 -1 1 0 0 0 -1 0 239.8665 0 239.8665 4 'crystal symmetry operation' 2_775 -x+2,-y+2,z -1 0 0 0 -1 0 0 0 1 319.822 319.822 0 5 'crystal symmetry operation' 3_756 -x+2,y,-z+1 -1 0 0 0 1 0 0 0 -1 319.822 0 159.911 6 'crystal symmetry operation' 4_576 x,-y+2,-z+1 1 0 0 0 -1 0 0 0 -1 0 319.822 159.911 7 'crystal symmetry operation' 21_554 y,z+1/2,x-1/2 0 1 0 0 0 1 1 0 0 0 79.9555 -79.9555 8 'crystal symmetry operation' 22_756 -y+2,z+1/2,-x+3/2 0 -1 0 0 0 1 -1 0 0 319.822 79.9555 239.8665 9 'crystal symmetry operation' 24_764 -y+2,-z+3/2,x-1/2 0 -1 0 0 0 -1 1 0 0 319.822 239.8665 -79.9555 10 'crystal symmetry operation' 29_554 z+1/2,x,y-1/2 0 0 1 1 0 0 0 1 0 79.9555 0 -79.9555 11 'crystal symmetry operation' 30_576 z+1/2,-x+2,-y+3/2 0 0 1 -1 0 0 0 -1 0 79.9555 319.822 239.8665 12 'crystal symmetry operation' 31_674 -z+3/2,-x+2,y-1/2 0 0 -1 -1 0 0 0 1 0 239.8665 319.822 -79.9555 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 353 n n S O2 SO4 doub 354 n n S O3 SO4 sing 355 n n S O4 SO4 sing 356 n n # _atom_sites.entry_id 3P89 _atom_sites.fract_transf_matrix[1][1] 0.006253 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006253 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006253 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 89P A 1 1 1 89P 89P . D 4 SO4 A 1 473 473 SO4 SO4 . E 5 HOH A 1 2 2 HOH HOH . E 5 HOH A 2 3 3 HOH HOH . E 5 HOH A 3 4 4 HOH HOH . E 5 HOH A 4 5 5 HOH HOH . E 5 HOH A 5 6 6 HOH HOH . E 5 HOH A 6 7 7 HOH HOH . E 5 HOH A 7 8 8 HOH HOH . E 5 HOH A 8 9 9 HOH HOH . E 5 HOH A 9 10 10 HOH HOH . E 5 HOH A 10 11 11 HOH HOH . E 5 HOH A 11 12 12 HOH HOH . E 5 HOH A 12 13 13 HOH HOH . E 5 HOH A 13 14 14 HOH HOH . E 5 HOH A 14 15 15 HOH HOH . E 5 HOH A 15 16 16 HOH HOH . E 5 HOH A 16 17 17 HOH HOH . E 5 HOH A 17 18 18 HOH HOH . E 5 HOH A 18 19 19 HOH HOH . E 5 HOH A 19 20 20 HOH HOH . E 5 HOH A 20 21 21 HOH HOH . E 5 HOH A 21 23 23 HOH HOH . E 5 HOH A 22 24 24 HOH HOH . E 5 HOH A 23 25 25 HOH HOH . E 5 HOH A 24 26 26 HOH HOH . E 5 HOH A 25 27 27 HOH HOH . E 5 HOH A 26 28 28 HOH HOH . E 5 HOH A 27 30 30 HOH HOH . E 5 HOH A 28 31 31 HOH HOH . E 5 HOH A 29 32 32 HOH HOH . E 5 HOH A 30 33 33 HOH HOH . E 5 HOH A 31 34 34 HOH HOH . E 5 HOH A 32 35 35 HOH HOH . E 5 HOH A 33 36 36 HOH HOH . E 5 HOH A 34 37 37 HOH HOH . E 5 HOH A 35 38 38 HOH HOH . E 5 HOH A 36 39 39 HOH HOH . E 5 HOH A 37 40 40 HOH HOH . E 5 HOH A 38 41 41 HOH HOH . E 5 HOH A 39 42 42 HOH HOH . E 5 HOH A 40 43 43 HOH HOH . E 5 HOH A 41 44 44 HOH HOH . E 5 HOH A 42 45 45 HOH HOH . E 5 HOH A 43 46 46 HOH HOH . E 5 HOH A 44 47 47 HOH HOH . E 5 HOH A 45 48 48 HOH HOH . E 5 HOH A 46 50 50 HOH HOH . E 5 HOH A 47 51 51 HOH HOH . E 5 HOH A 48 52 52 HOH HOH . E 5 HOH A 49 53 53 HOH HOH . E 5 HOH A 50 54 54 HOH HOH . E 5 HOH A 51 55 55 HOH HOH . E 5 HOH A 52 56 56 HOH HOH . E 5 HOH A 53 57 57 HOH HOH . E 5 HOH A 54 58 58 HOH HOH . E 5 HOH A 55 59 59 HOH HOH . E 5 HOH A 56 61 61 HOH HOH . E 5 HOH A 57 62 62 HOH HOH . E 5 HOH A 58 63 63 HOH HOH . E 5 HOH A 59 64 64 HOH HOH . E 5 HOH A 60 65 65 HOH HOH . E 5 HOH A 61 66 66 HOH HOH . E 5 HOH A 62 67 67 HOH HOH . E 5 HOH A 63 68 68 HOH HOH . E 5 HOH A 64 69 69 HOH HOH . E 5 HOH A 65 70 70 HOH HOH . E 5 HOH A 66 71 71 HOH HOH . E 5 HOH A 67 72 72 HOH HOH . E 5 HOH A 68 73 73 HOH HOH . E 5 HOH A 69 74 74 HOH HOH . E 5 HOH A 70 75 75 HOH HOH . E 5 HOH A 71 76 76 HOH HOH . E 5 HOH A 72 77 77 HOH HOH . E 5 HOH A 73 78 78 HOH HOH . E 5 HOH A 74 79 79 HOH HOH . E 5 HOH A 75 80 80 HOH HOH . E 5 HOH A 76 474 473 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 4 138.806 153.424 83.071 1 59.33 ? S SO4 473 A 1 HETATM 2 O O1 SO4 . . . D 4 137.941 154.587 83.242 1 60.32 ? O1 SO4 473 A 1 HETATM 3 O O2 SO4 . . . D 4 139.509 153.189 84.325 1 59.57 ? O2 SO4 473 A 1 HETATM 4 O O3 SO4 . . . D 4 139.771 153.68 82.009 1 60.15 ? O3 SO4 473 A 1 HETATM 5 O O4 SO4 . . . D 4 138.001 152.259 82.71 1 59.59 ? O4 SO4 473 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #