data_3P8F
#
_model_server_result.job_id            qvgWV-yOHBSzVBKOecdPVQ 
_model_server_result.datetime_utc      '2024-11-05 01:25:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3p8f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1001}' 
#
_entry.id    3P8F 
#
_exptl.entry_id    3P8F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              307.323 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLUTATHIONE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3P8F 
_cell.length_a            75.862 
_cell.length_b            75.862 
_cell.length_c            94.094 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3P8F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 27 A CYS 42 1_555 A SG CYS 43 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf2 A SG CYS 162 A CYS 168 1_555 A SG CYS 176 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf3 A SG CYS 187 A CYS 191 1_555 A SG CYS 216 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf4 B SG CYS 3 I CYS 3 1_555 B SG CYS 11 I CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
covale ? covale1 A SG CYS 117 A CYS 122 1_555 C SG2 GSH . A GSH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
covale ? covale2 B N GLY 1 I GLY 1 1_555 B C ASP 14 I ASP 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.442 ? 
#
_chem_comp.formula           'C10 H17 N3 O6 S' 
_chem_comp.formula_weight    307.323 
_chem_comp.id                GSH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLUTATHIONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3P8F 
_atom_sites.fract_transf_matrix[1][1]    0.013182 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013182 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010628 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GSH A 1 1001 1001 GSH GSH . 
D 4 HOH A 1 1101 1 HOH HOH . 
D 4 HOH A 2 1102 2 HOH HOH . 
D 4 HOH A 3 1103 3 HOH HOH . 
D 4 HOH A 4 1104 4 HOH HOH . 
D 4 HOH A 5 1105 5 HOH HOH . 
D 4 HOH A 6 1106 6 HOH HOH . 
D 4 HOH A 7 1107 7 HOH HOH . 
D 4 HOH A 8 1108 8 HOH HOH . 
D 4 HOH A 9 1109 9 HOH HOH . 
D 4 HOH A 10 1110 10 HOH HOH . 
D 4 HOH A 11 1111 11 HOH HOH . 
D 4 HOH A 12 1112 12 HOH HOH . 
D 4 HOH A 13 1113 13 HOH HOH . 
D 4 HOH A 14 1114 14 HOH HOH . 
D 4 HOH A 15 1115 15 HOH HOH . 
D 4 HOH A 16 1116 245 HOH HOH . 
D 4 HOH A 17 1117 246 HOH HOH . 
D 4 HOH A 18 1118 247 HOH HOH . 
D 4 HOH A 19 1119 248 HOH HOH . 
D 4 HOH A 20 1120 249 HOH HOH . 
D 4 HOH A 21 1121 250 HOH HOH . 
D 4 HOH A 22 1122 251 HOH HOH . 
D 4 HOH A 23 1123 252 HOH HOH . 
D 4 HOH A 24 1124 253 HOH HOH . 
D 4 HOH A 25 1125 254 HOH HOH . 
D 4 HOH A 26 1126 255 HOH HOH . 
D 4 HOH A 27 1127 256 HOH HOH . 
D 4 HOH A 28 1128 257 HOH HOH . 
D 4 HOH A 29 1129 258 HOH HOH . 
D 4 HOH A 30 1130 259 HOH HOH . 
D 4 HOH A 31 1131 260 HOH HOH . 
D 4 HOH A 32 1132 261 HOH HOH . 
D 4 HOH A 33 1133 262 HOH HOH . 
D 4 HOH A 34 1134 263 HOH HOH . 
D 4 HOH A 35 1135 264 HOH HOH . 
D 4 HOH A 36 1136 265 HOH HOH . 
D 4 HOH A 37 1137 266 HOH HOH . 
D 4 HOH A 38 1138 267 HOH HOH . 
D 4 HOH A 39 1139 268 HOH HOH . 
D 4 HOH A 40 1140 269 HOH HOH . 
D 4 HOH A 41 1141 270 HOH HOH . 
D 4 HOH A 42 1142 271 HOH HOH . 
D 4 HOH A 43 1143 272 HOH HOH . 
D 4 HOH A 44 1144 273 HOH HOH . 
D 4 HOH A 45 1145 274 HOH HOH . 
D 4 HOH A 46 1146 275 HOH HOH . 
D 4 HOH A 47 1147 276 HOH HOH . 
D 4 HOH A 48 1148 277 HOH HOH . 
D 4 HOH A 49 1149 278 HOH HOH . 
D 4 HOH A 50 1150 279 HOH HOH . 
D 4 HOH A 51 1151 280 HOH HOH . 
D 4 HOH A 52 1152 281 HOH HOH . 
D 4 HOH A 53 1153 282 HOH HOH . 
D 4 HOH A 54 1154 283 HOH HOH . 
D 4 HOH A 55 1155 284 HOH HOH . 
D 4 HOH A 56 1156 285 HOH HOH . 
D 4 HOH A 57 1157 286 HOH HOH . 
D 4 HOH A 58 1158 287 HOH HOH . 
D 4 HOH A 59 1159 288 HOH HOH . 
D 4 HOH A 60 1160 289 HOH HOH . 
D 4 HOH A 61 1161 290 HOH HOH . 
D 4 HOH A 62 1162 291 HOH HOH . 
D 4 HOH A 63 1163 292 HOH HOH . 
D 4 HOH A 64 1164 293 HOH HOH . 
D 4 HOH A 65 1165 294 HOH HOH . 
D 4 HOH A 66 1166 295 HOH HOH . 
D 4 HOH A 67 1167 296 HOH HOH . 
D 4 HOH A 68 1168 297 HOH HOH . 
D 4 HOH A 69 1169 298 HOH HOH . 
D 4 HOH A 70 1170 299 HOH HOH . 
D 4 HOH A 71 1171 300 HOH HOH . 
D 4 HOH A 72 1172 301 HOH HOH . 
D 4 HOH A 73 1173 302 HOH HOH . 
D 4 HOH A 74 1174 303 HOH HOH . 
D 4 HOH A 75 1175 304 HOH HOH . 
D 4 HOH A 76 1176 305 HOH HOH . 
D 4 HOH A 77 1177 306 HOH HOH . 
D 4 HOH A 78 1178 307 HOH HOH . 
D 4 HOH A 79 1179 308 HOH HOH . 
D 4 HOH A 80 1180 309 HOH HOH . 
D 4 HOH A 81 1181 310 HOH HOH . 
D 4 HOH A 82 1182 311 HOH HOH . 
D 4 HOH A 83 1183 312 HOH HOH . 
D 4 HOH A 84 1184 313 HOH HOH . 
D 4 HOH A 85 1185 314 HOH HOH . 
D 4 HOH A 86 1186 315 HOH HOH . 
D 4 HOH A 87 1187 316 HOH HOH . 
D 4 HOH A 88 1188 317 HOH HOH . 
D 4 HOH A 89 1189 318 HOH HOH . 
D 4 HOH A 90 1190 319 HOH HOH . 
D 4 HOH A 91 1191 320 HOH HOH . 
D 4 HOH A 92 1192 321 HOH HOH . 
D 4 HOH A 93 1193 322 HOH HOH . 
D 4 HOH A 94 1194 323 HOH HOH . 
D 4 HOH A 95 1195 324 HOH HOH . 
E 4 HOH I 1 101 58 HOH HOH . 
E 4 HOH I 2 102 59 HOH HOH . 
E 4 HOH I 3 103 67 HOH HOH . 
E 4 HOH I 4 104 70 HOH HOH . 
E 4 HOH I 5 105 73 HOH HOH . 
E 4 HOH I 6 106 85 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 GSH . . . C 3 -31.64 -23.745 -28.321 1 111.48 ? N1 GSH 1001 A 1 
HETATM 2 C CA1 GSH . . . C 3 -31.058 -24.879 -28.984 1 111.02 ? CA1 GSH 1001 A 1 
HETATM 3 C C1 GSH . . . C 3 -31.497 -26.07 -28.211 1 116.69 ? C1 GSH 1001 A 1 
HETATM 4 O O11 GSH . . . C 3 -30.985 -27.177 -28.466 1 116.15 ? O11 GSH 1001 A 1 
HETATM 5 O O12 GSH . . . C 3 -32.345 -25.882 -27.321 1 118.19 ? O12 GSH 1001 A 1 
HETATM 6 C CB1 GSH . . . C 3 -29.557 -24.753 -28.835 1 104.51 ? CB1 GSH 1001 A 1 
HETATM 7 C CG1 GSH . . . C 3 -29.232 -24.275 -27.436 1 98.79 ? CG1 GSH 1001 A 1 
HETATM 8 C CD1 GSH . . . C 3 -27.818 -24.635 -27.067 1 93.75 ? CD1 GSH 1001 A 1 
HETATM 9 O OE1 GSH . . . C 3 -27.155 -25.404 -27.74 1 101.43 ? OE1 GSH 1001 A 1 
HETATM 10 N N2 GSH . . . C 3 -27.402 -24.065 -25.959 1 80.51 ? N2 GSH 1001 A 1 
HETATM 11 C CA2 GSH . . . C 3 -26.077 -24.247 -25.433 1 77.54 ? CA2 GSH 1001 A 1 
HETATM 12 C C2 GSH . . . C 3 -25.843 -25.491 -24.636 1 79.15 ? C2 GSH 1001 A 1 
HETATM 13 O O2 GSH . . . C 3 -26.639 -26.378 -24.543 1 79.05 ? O2 GSH 1001 A 1 
HETATM 14 C CB2 GSH . . . C 3 -25.973 -23.002 -24.586 1 63.1 ? CB2 GSH 1001 A 1 
HETATM 15 S SG2 GSH . . . C 3 -26.825 -23.154 -23.015 1 82.05 ? SG2 GSH 1001 A 1 
HETATM 16 N N3 GSH . . . C 3 -24.694 -25.603 -24.031 1 79.84 ? N3 GSH 1001 A 1 
HETATM 17 C CA3 GSH . . . C 3 -24.276 -26.713 -23.218 1 89.86 ? CA3 GSH 1001 A 1 
HETATM 18 C C3 GSH . . . C 3 -24.535 -27.983 -23.937 1 79.77 ? C3 GSH 1001 A 1 
HETATM 19 O O31 GSH . . . C 3 -25.014 -27.921 -25.048 1 82.31 ? O31 GSH 1001 A 1 
HETATM 20 O O32 GSH . . . C 3 -24.26 -29.054 -23.404 1 78.05 ? O32 GSH 1001 A 1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           20 
#