data_3PAG # _model_server_result.job_id dch-ARf7MvO_SII1XohcGg _model_server_result.datetime_utc '2024-11-24 02:57:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pag # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1}' # _entry.id 3PAG # _exptl.entry_id 3PAG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PAG _cell.length_a 102.274 _cell.length_b 102.274 _cell.length_c 85.449 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PAG _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OG SER 51 A SER 81 1_555 C CAJ 4J6 . A 4J6 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.688 ? covale ? covale2 B OG SER 51 B SER 81 1_555 G CAJ 4J6 . B 4J6 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.396 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 331 n n S O2 SO4 doub 332 n n S O3 SO4 sing 333 n n S O4 SO4 sing 334 n n # _atom_sites.entry_id 3PAG _atom_sites.fract_transf_matrix[1][1] 0.009778 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009778 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011703 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 4J6 A 1 300 300 4J6 DRW . D 3 SO4 A 1 1 1 SO4 SO4 . E 3 SO4 A 1 2 2 SO4 SO4 . F 3 SO4 A 1 8 8 SO4 SO4 . G 2 4J6 B 1 300 300 4J6 DRW . H 3 SO4 B 1 4 4 SO4 SO4 . I 3 SO4 B 1 5 5 SO4 SO4 . J 3 SO4 B 1 7 7 SO4 SO4 . K 4 HOH A 1 4 4 HOH HOH . K 4 HOH A 2 5 5 HOH HOH . K 4 HOH A 3 7 7 HOH HOH . K 4 HOH A 4 9 9 HOH HOH . K 4 HOH A 5 12 12 HOH HOH . K 4 HOH A 6 13 13 HOH HOH . K 4 HOH A 7 16 16 HOH HOH . K 4 HOH A 8 17 17 HOH HOH . K 4 HOH A 9 20 20 HOH HOH . K 4 HOH A 10 24 24 HOH HOH . K 4 HOH A 11 25 25 HOH HOH . K 4 HOH A 12 26 26 HOH HOH . K 4 HOH A 13 27 27 HOH HOH . K 4 HOH A 14 29 29 HOH HOH . K 4 HOH A 15 276 1 HOH HOH . K 4 HOH A 16 277 31 HOH HOH . K 4 HOH A 17 278 32 HOH HOH . K 4 HOH A 18 279 34 HOH HOH . K 4 HOH A 19 280 35 HOH HOH . K 4 HOH A 20 281 38 HOH HOH . K 4 HOH A 21 282 41 HOH HOH . K 4 HOH A 22 283 44 HOH HOH . K 4 HOH A 23 284 45 HOH HOH . K 4 HOH A 24 285 47 HOH HOH . K 4 HOH A 25 286 48 HOH HOH . K 4 HOH A 26 287 49 HOH HOH . K 4 HOH A 27 288 50 HOH HOH . K 4 HOH A 28 289 52 HOH HOH . K 4 HOH A 29 290 54 HOH HOH . K 4 HOH A 30 291 55 HOH HOH . K 4 HOH A 31 292 58 HOH HOH . K 4 HOH A 32 293 61 HOH HOH . K 4 HOH A 33 294 62 HOH HOH . K 4 HOH A 34 295 63 HOH HOH . K 4 HOH A 35 296 67 HOH HOH . K 4 HOH A 36 297 73 HOH HOH . K 4 HOH A 37 298 74 HOH HOH . K 4 HOH A 38 299 75 HOH HOH . K 4 HOH A 39 301 77 HOH HOH . K 4 HOH A 40 302 78 HOH HOH . K 4 HOH A 41 303 79 HOH HOH . K 4 HOH A 42 304 80 HOH HOH . K 4 HOH A 43 305 82 HOH HOH . K 4 HOH A 44 306 86 HOH HOH . K 4 HOH A 45 307 87 HOH HOH . K 4 HOH A 46 308 88 HOH HOH . K 4 HOH A 47 309 90 HOH HOH . K 4 HOH A 48 310 93 HOH HOH . K 4 HOH A 49 311 95 HOH HOH . K 4 HOH A 50 312 98 HOH HOH . K 4 HOH A 51 313 100 HOH HOH . K 4 HOH A 52 314 102 HOH HOH . K 4 HOH A 53 315 103 HOH HOH . K 4 HOH A 54 316 104 HOH HOH . K 4 HOH A 55 317 107 HOH HOH . K 4 HOH A 56 318 111 HOH HOH . K 4 HOH A 57 319 112 HOH HOH . K 4 HOH A 58 320 113 HOH HOH . K 4 HOH A 59 321 115 HOH HOH . K 4 HOH A 60 322 116 HOH HOH . K 4 HOH A 61 323 118 HOH HOH . K 4 HOH A 62 324 120 HOH HOH . K 4 HOH A 63 325 126 HOH HOH . K 4 HOH A 64 326 127 HOH HOH . K 4 HOH A 65 327 128 HOH HOH . K 4 HOH A 66 328 133 HOH HOH . K 4 HOH A 67 329 134 HOH HOH . K 4 HOH A 68 330 135 HOH HOH . K 4 HOH A 69 331 136 HOH HOH . K 4 HOH A 70 332 138 HOH HOH . K 4 HOH A 71 333 141 HOH HOH . K 4 HOH A 72 334 147 HOH HOH . K 4 HOH A 73 335 148 HOH HOH . K 4 HOH A 74 336 149 HOH HOH . K 4 HOH A 75 337 154 HOH HOH . K 4 HOH A 76 338 155 HOH HOH . K 4 HOH A 77 339 156 HOH HOH . K 4 HOH A 78 340 158 HOH HOH . K 4 HOH A 79 341 159 HOH HOH . K 4 HOH A 80 342 160 HOH HOH . K 4 HOH A 81 343 162 HOH HOH . K 4 HOH A 82 344 164 HOH HOH . K 4 HOH A 83 345 165 HOH HOH . K 4 HOH A 84 346 167 HOH HOH . K 4 HOH A 85 347 168 HOH HOH . K 4 HOH A 86 348 169 HOH HOH . K 4 HOH A 87 349 172 HOH HOH . K 4 HOH A 88 350 173 HOH HOH . K 4 HOH A 89 351 174 HOH HOH . K 4 HOH A 90 352 175 HOH HOH . K 4 HOH A 91 354 178 HOH HOH . K 4 HOH A 92 355 179 HOH HOH . K 4 HOH A 93 356 180 HOH HOH . K 4 HOH A 94 357 181 HOH HOH . K 4 HOH A 95 358 182 HOH HOH . K 4 HOH A 96 359 183 HOH HOH . K 4 HOH A 97 360 190 HOH HOH . K 4 HOH A 98 361 192 HOH HOH . K 4 HOH A 99 362 193 HOH HOH . K 4 HOH A 100 363 198 HOH HOH . K 4 HOH A 101 364 199 HOH HOH . L 4 HOH B 1 2 2 HOH HOH . L 4 HOH B 2 3 3 HOH HOH . L 4 HOH B 3 6 6 HOH HOH . L 4 HOH B 4 8 8 HOH HOH . L 4 HOH B 5 10 10 HOH HOH . L 4 HOH B 6 11 11 HOH HOH . L 4 HOH B 7 14 14 HOH HOH . L 4 HOH B 8 15 15 HOH HOH . L 4 HOH B 9 18 18 HOH HOH . L 4 HOH B 10 19 19 HOH HOH . L 4 HOH B 11 21 21 HOH HOH . L 4 HOH B 12 22 22 HOH HOH . L 4 HOH B 13 23 23 HOH HOH . L 4 HOH B 14 28 28 HOH HOH . L 4 HOH B 15 30 30 HOH HOH . L 4 HOH B 16 276 33 HOH HOH . L 4 HOH B 17 277 36 HOH HOH . L 4 HOH B 18 278 37 HOH HOH . L 4 HOH B 19 279 39 HOH HOH . L 4 HOH B 20 280 40 HOH HOH . L 4 HOH B 21 281 42 HOH HOH . L 4 HOH B 22 282 43 HOH HOH . L 4 HOH B 23 283 46 HOH HOH . L 4 HOH B 24 284 51 HOH HOH . L 4 HOH B 25 285 53 HOH HOH . L 4 HOH B 26 286 56 HOH HOH . L 4 HOH B 27 287 57 HOH HOH . L 4 HOH B 28 288 59 HOH HOH . L 4 HOH B 29 289 60 HOH HOH . L 4 HOH B 30 290 64 HOH HOH . L 4 HOH B 31 291 65 HOH HOH . L 4 HOH B 32 292 66 HOH HOH . L 4 HOH B 33 293 68 HOH HOH . L 4 HOH B 34 294 69 HOH HOH . L 4 HOH B 35 295 70 HOH HOH . L 4 HOH B 36 296 71 HOH HOH . L 4 HOH B 37 297 72 HOH HOH . L 4 HOH B 38 298 76 HOH HOH . L 4 HOH B 39 299 81 HOH HOH . L 4 HOH B 40 301 83 HOH HOH . L 4 HOH B 41 302 84 HOH HOH . L 4 HOH B 42 303 85 HOH HOH . L 4 HOH B 43 304 89 HOH HOH . L 4 HOH B 44 305 91 HOH HOH . L 4 HOH B 45 306 92 HOH HOH . L 4 HOH B 46 307 94 HOH HOH . L 4 HOH B 47 308 96 HOH HOH . L 4 HOH B 48 309 97 HOH HOH . L 4 HOH B 49 310 99 HOH HOH . L 4 HOH B 50 311 101 HOH HOH . L 4 HOH B 51 312 105 HOH HOH . L 4 HOH B 52 313 106 HOH HOH . L 4 HOH B 53 314 108 HOH HOH . L 4 HOH B 54 315 109 HOH HOH . L 4 HOH B 55 316 110 HOH HOH . L 4 HOH B 56 317 114 HOH HOH . L 4 HOH B 57 318 117 HOH HOH . L 4 HOH B 58 319 119 HOH HOH . L 4 HOH B 59 320 121 HOH HOH . L 4 HOH B 60 321 122 HOH HOH . L 4 HOH B 61 322 123 HOH HOH . L 4 HOH B 62 323 124 HOH HOH . L 4 HOH B 63 324 125 HOH HOH . L 4 HOH B 64 325 129 HOH HOH . L 4 HOH B 65 326 130 HOH HOH . L 4 HOH B 66 327 131 HOH HOH . L 4 HOH B 67 328 137 HOH HOH . L 4 HOH B 68 329 139 HOH HOH . L 4 HOH B 69 330 140 HOH HOH . L 4 HOH B 70 331 142 HOH HOH . L 4 HOH B 71 332 143 HOH HOH . L 4 HOH B 72 333 144 HOH HOH . L 4 HOH B 73 334 145 HOH HOH . L 4 HOH B 74 335 146 HOH HOH . L 4 HOH B 75 336 150 HOH HOH . L 4 HOH B 76 337 151 HOH HOH . L 4 HOH B 77 338 152 HOH HOH . L 4 HOH B 78 339 153 HOH HOH . L 4 HOH B 79 340 157 HOH HOH . L 4 HOH B 80 341 161 HOH HOH . L 4 HOH B 81 342 163 HOH HOH . L 4 HOH B 82 343 170 HOH HOH . L 4 HOH B 83 344 184 HOH HOH . L 4 HOH B 84 345 185 HOH HOH . L 4 HOH B 85 346 186 HOH HOH . L 4 HOH B 86 347 187 HOH HOH . L 4 HOH B 87 348 188 HOH HOH . L 4 HOH B 88 349 189 HOH HOH . L 4 HOH B 89 350 191 HOH HOH . L 4 HOH B 90 351 194 HOH HOH . L 4 HOH B 91 352 195 HOH HOH . L 4 HOH B 92 353 176 HOH HOH . L 4 HOH B 93 354 197 HOH HOH . L 4 HOH B 94 355 200 HOH HOH . L 4 HOH B 95 356 196 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 10.271 62.822 1.186 1 81.74 ? S SO4 1 A 1 HETATM 2 O O1 SO4 . . . D 3 11.556 63.513 1.4 1 81.07 ? O1 SO4 1 A 1 HETATM 3 O O2 SO4 . . . D 3 10.065 62.591 -0.248 1 80.98 ? O2 SO4 1 A 1 HETATM 4 O O3 SO4 . . . D 3 10.321 61.553 1.908 1 80.65 ? O3 SO4 1 A 1 HETATM 5 O O4 SO4 . . . D 3 9.144 63.614 1.684 1 80.94 ? O4 SO4 1 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 124 _model_server_stats.create_model_time_ms 87 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #