data_3PAM # _model_server_result.job_id 8UgSjWDEfOdU8goQcV_4GQ _model_server_result.datetime_utc '2025-01-10 07:09:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pam # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":6}' # _entry.id 3PAM # _exptl.entry_id 3PAM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ETHANOL _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.28 _cell.angle_gamma 90 _cell.entry_id 3PAM _cell.length_a 100.847 _cell.length_b 39.715 _cell.length_c 101.353 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PAM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,M 1 1 B,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ILE 5 A ILE 320 1_555 A N MSE 6 A MSE 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C MSE 6 A MSE 321 1_555 A N GLY 7 A GLY 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale3 A C VAL 82 A VAL 397 1_555 A N MSE 83 A MSE 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale4 A C MSE 83 A MSE 398 1_555 A N ASP 84 A ASP 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 A C GLY 96 A GLY 411 1_555 A N MSE 97 A MSE 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale6 A C MSE 97 A MSE 412 1_555 A N ASP 98 A ASP 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale7 A C ILE 133 A ILE 448 1_555 A N MSE 134 A MSE 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale8 A C MSE 134 A MSE 449 1_555 A N THR 135 A THR 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale9 A C GLY 173 A GLY 488 1_555 A N MSE 174 A MSE 489 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale10 A C MSE 174 A MSE 489 1_555 A N PHE 175 A PHE 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale11 A C ASP 178 A ASP 493 1_555 A N MSE 179 A MSE 494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale12 A C MSE 179 A MSE 494 1_555 A N ILE 180 A ILE 495 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale13 A C ALA 221 A ALA 536 1_555 A N MSE 222 A MSE 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale14 A C MSE 222 A MSE 537 1_555 A N ILE 223 A ILE 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale15 B C ILE 5 B ILE 320 1_555 B N MSE 6 B MSE 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale16 B C MSE 6 B MSE 321 1_555 B N GLY 7 B GLY 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale17 B C VAL 82 B VAL 397 1_555 B N MSE 83 B MSE 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale18 B C MSE 83 B MSE 398 1_555 B N ASP 84 B ASP 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale19 B C ILE 133 B ILE 448 1_555 B N MSE 134 B MSE 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale20 B C MSE 134 B MSE 449 1_555 B N THR 135 B THR 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale21 B C GLY 173 B GLY 488 1_555 B N MSE 174 B MSE 489 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale22 B C MSE 174 B MSE 489 1_555 B N PHE 175 B PHE 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale23 B C ASP 178 B ASP 493 1_555 B N MSE 179 B MSE 494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale24 B C MSE 179 B MSE 494 1_555 B N ILE 180 B ILE 495 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale25 B C ALA 221 B ALA 536 1_555 B N MSE 222 B MSE 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale26 B C MSE 222 B MSE 537 1_555 B N ILE 223 B ILE 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? # _chem_comp.formula 'C2 H6 O' _chem_comp.formula_weight 46.068 _chem_comp.id EOH _chem_comp.mon_nstd_flag . _chem_comp.name ETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 EOH sing 70 n n C1 O EOH sing 71 n n C1 H11 EOH sing 72 n n C1 H12 EOH sing 73 n n C2 H21 EOH sing 74 n n C2 H22 EOH sing 75 n n C2 H23 EOH sing 76 n n O HO EOH sing 77 n n # _atom_sites.entry_id 3PAM _atom_sites.fract_transf_matrix[1][1] 0.009916 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000395 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025179 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009874 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EOH A 1 1 1 EOH EOH . D 2 EOH A 1 2 2 EOH EOH . E 2 EOH A 1 4 4 EOH EOH . F 2 EOH A 1 5 5 EOH EOH . G 2 EOH A 1 6 6 EOH EOH . H 2 EOH A 1 8 8 EOH EOH . I 2 EOH B 1 3 3 EOH EOH . J 2 EOH B 1 7 7 EOH EOH . K 2 EOH B 1 9 9 EOH EOH . L 2 EOH B 1 10 10 EOH EOH . M 3 HOH A 1 7 7 HOH HOH . M 3 HOH A 2 9 9 HOH HOH . M 3 HOH A 3 11 11 HOH HOH . M 3 HOH A 4 12 12 HOH HOH . M 3 HOH A 5 13 13 HOH HOH . M 3 HOH A 6 14 14 HOH HOH . M 3 HOH A 7 15 15 HOH HOH . M 3 HOH A 8 16 16 HOH HOH . M 3 HOH A 9 18 18 HOH HOH . M 3 HOH A 10 24 24 HOH HOH . M 3 HOH A 11 25 25 HOH HOH . M 3 HOH A 12 26 26 HOH HOH . M 3 HOH A 13 27 27 HOH HOH . M 3 HOH A 14 28 28 HOH HOH . M 3 HOH A 15 29 29 HOH HOH . M 3 HOH A 16 30 30 HOH HOH . M 3 HOH A 17 31 31 HOH HOH . M 3 HOH A 18 32 32 HOH HOH . M 3 HOH A 19 33 33 HOH HOH . M 3 HOH A 20 35 35 HOH HOH . M 3 HOH A 21 36 36 HOH HOH . M 3 HOH A 22 37 37 HOH HOH . M 3 HOH A 23 38 38 HOH HOH . M 3 HOH A 24 39 39 HOH HOH . M 3 HOH A 25 40 40 HOH HOH . M 3 HOH A 26 41 41 HOH HOH . M 3 HOH A 27 47 47 HOH HOH . M 3 HOH A 28 48 48 HOH HOH . M 3 HOH A 29 49 49 HOH HOH . M 3 HOH A 30 52 52 HOH HOH . M 3 HOH A 31 53 53 HOH HOH . M 3 HOH A 32 54 54 HOH HOH . M 3 HOH A 33 58 58 HOH HOH . M 3 HOH A 34 59 59 HOH HOH . M 3 HOH A 35 60 60 HOH HOH . M 3 HOH A 36 61 61 HOH HOH . M 3 HOH A 37 62 62 HOH HOH . M 3 HOH A 38 63 63 HOH HOH . M 3 HOH A 39 64 64 HOH HOH . M 3 HOH A 40 67 67 HOH HOH . M 3 HOH A 41 575 1 HOH HOH . M 3 HOH A 42 576 2 HOH HOH . M 3 HOH A 43 577 5 HOH HOH . M 3 HOH A 44 578 6 HOH HOH . M 3 HOH A 45 579 8 HOH HOH . N 3 HOH B 1 4 4 HOH HOH . N 3 HOH B 2 17 17 HOH HOH . N 3 HOH B 3 19 19 HOH HOH . N 3 HOH B 4 20 20 HOH HOH . N 3 HOH B 5 21 21 HOH HOH . N 3 HOH B 6 22 22 HOH HOH . N 3 HOH B 7 23 23 HOH HOH . N 3 HOH B 8 34 34 HOH HOH . N 3 HOH B 9 42 42 HOH HOH . N 3 HOH B 10 43 43 HOH HOH . N 3 HOH B 11 44 44 HOH HOH . N 3 HOH B 12 45 45 HOH HOH . N 3 HOH B 13 46 46 HOH HOH . N 3 HOH B 14 50 50 HOH HOH . N 3 HOH B 15 51 51 HOH HOH . N 3 HOH B 16 55 55 HOH HOH . N 3 HOH B 17 56 56 HOH HOH . N 3 HOH B 18 57 57 HOH HOH . N 3 HOH B 19 65 65 HOH HOH . N 3 HOH B 20 66 66 HOH HOH . N 3 HOH B 21 575 3 HOH HOH . N 3 HOH B 22 576 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EOH . . . G 2 21.898 9.446 27.266 1 24.87 ? C1 EOH 6 A 1 HETATM 2 C C2 EOH . . . G 2 21.307 10.808 26.852 1 25.77 ? C2 EOH 6 A 1 HETATM 3 O O EOH . . . G 2 23.327 9.58 27.162 1 25.43 ? O EOH 6 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 3 #