data_3PAQ # _model_server_result.job_id Qdls42jp11xq8i2g7Eoz9g _model_server_result.datetime_utc '2024-11-08 13:28:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3paq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 3PAQ # _exptl.entry_id 3PAQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3PAQ _cell.length_a 97.452 _cell.length_b 97.452 _cell.length_c 44.848 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PAQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 97.452 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 48.726 84.395908 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 55 A CYS 135 1_555 A SG CYS 146 A CYS 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 124 A CYS 204 1_555 A SG CYS 138 A CYS 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc1 A OE1 GLU 91 A GLU 171 1_555 C NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? metalc ? metalc2 A OE2 GLU 91 A GLU 171 1_555 C NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.178 ? metalc ? metalc3 A OE1 GLU 115 A GLU 195 1_555 B CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc4 A OE1 GLU 122 A GLU 202 1_555 B CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.983 ? metalc ? metalc5 A O GLU 122 A GLU 202 1_555 C NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc6 A OD1 ASN 134 A ASN 214 1_555 B CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc7 A OD1 ASP 135 A ASP 215 1_555 B CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc8 A O ASP 135 A ASP 215 1_555 B CA CA . A CA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? metalc ? metalc9 B CA CA . A CA 300 1_555 E O3 MMA . A MMA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc10 B CA CA . A CA 300 1_555 E O4 MMA . A MMA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc11 B CA CA . A CA 300 1_555 F O HOH . A HOH 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3PAQ _atom_sites.fract_transf_matrix[1][1] 0.010261 _atom_sites.fract_transf_matrix[1][2] 0.005924 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011849 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022298 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 300 300 CA CA . C 3 NA A 1 301 301 NA NA . D 4 SO4 A 1 302 302 SO4 SO4 . E 5 MMA A 1 501 501 MMA MMA . F 6 HOH A 1 502 502 HOH HOH . F 6 HOH A 2 503 503 HOH HOH . F 6 HOH A 3 504 504 HOH HOH . F 6 HOH A 4 505 505 HOH HOH . F 6 HOH A 5 506 506 HOH HOH . F 6 HOH A 6 507 507 HOH HOH . F 6 HOH A 7 508 508 HOH HOH . F 6 HOH A 8 509 509 HOH HOH . F 6 HOH A 9 510 510 HOH HOH . F 6 HOH A 10 511 511 HOH HOH . F 6 HOH A 11 512 512 HOH HOH . F 6 HOH A 12 513 513 HOH HOH . F 6 HOH A 13 514 514 HOH HOH . F 6 HOH A 14 515 515 HOH HOH . F 6 HOH A 15 516 516 HOH HOH . F 6 HOH A 16 517 517 HOH HOH . F 6 HOH A 17 518 518 HOH HOH . F 6 HOH A 18 519 519 HOH HOH . F 6 HOH A 19 520 520 HOH HOH . F 6 HOH A 20 521 521 HOH HOH . F 6 HOH A 21 522 522 HOH HOH . F 6 HOH A 22 523 523 HOH HOH . F 6 HOH A 23 524 524 HOH HOH . F 6 HOH A 24 525 525 HOH HOH . F 6 HOH A 25 526 526 HOH HOH . F 6 HOH A 26 527 527 HOH HOH . F 6 HOH A 27 528 528 HOH HOH . F 6 HOH A 28 529 529 HOH HOH . F 6 HOH A 29 530 530 HOH HOH . F 6 HOH A 30 531 531 HOH HOH . F 6 HOH A 31 532 532 HOH HOH . F 6 HOH A 32 533 533 HOH HOH . F 6 HOH A 33 534 534 HOH HOH . F 6 HOH A 34 535 535 HOH HOH . F 6 HOH A 35 536 536 HOH HOH . F 6 HOH A 36 537 537 HOH HOH . F 6 HOH A 37 538 538 HOH HOH . F 6 HOH A 38 539 539 HOH HOH . F 6 HOH A 39 540 540 HOH HOH . F 6 HOH A 40 541 541 HOH HOH . F 6 HOH A 41 542 542 HOH HOH . F 6 HOH A 42 543 543 HOH HOH . F 6 HOH A 43 544 544 HOH HOH . F 6 HOH A 44 545 545 HOH HOH . F 6 HOH A 45 546 546 HOH HOH . F 6 HOH A 46 547 547 HOH HOH . F 6 HOH A 47 548 548 HOH HOH . F 6 HOH A 48 549 549 HOH HOH . F 6 HOH A 49 550 550 HOH HOH . F 6 HOH A 50 551 551 HOH HOH . F 6 HOH A 51 552 552 HOH HOH . F 6 HOH A 52 553 553 HOH HOH . F 6 HOH A 53 554 554 HOH HOH . F 6 HOH A 54 555 555 HOH HOH . F 6 HOH A 55 556 556 HOH HOH . F 6 HOH A 56 557 557 HOH HOH . F 6 HOH A 57 558 558 HOH HOH . F 6 HOH A 58 559 559 HOH HOH . F 6 HOH A 59 560 560 HOH HOH . F 6 HOH A 60 561 561 HOH HOH . F 6 HOH A 61 562 562 HOH HOH . F 6 HOH A 62 563 563 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 82.771 _atom_site.Cartn_y 36.046 _atom_site.Cartn_z 47.251 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.72 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 300 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 218 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #