data_3PBA # _model_server_result.job_id G5h4PATGxVZWeKOZYu-wkA _model_server_result.datetime_utc '2024-11-05 00:28:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pba # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":6128}' # _entry.id 3PBA # _exptl.entry_id 3PBA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 76.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-1,2-PROPANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.89 _cell.angle_gamma 90 _cell.entry_id 3PBA _cell.length_a 93.371 _cell.length_b 61.564 _cell.length_c 119.074 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PBA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O2' _chem_comp.formula_weight 76.094 _chem_comp.id PGO _chem_comp.mon_nstd_flag . _chem_comp.name S-1,2-PROPANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PGO sing 237 n n C1 O1 PGO sing 238 n n C1 H11 PGO sing 239 n n C1 H12 PGO sing 240 n n C2 C3 PGO sing 241 n n C2 O2 PGO sing 242 n n C2 H2 PGO sing 243 n n C3 H31 PGO sing 244 n n C3 H32 PGO sing 245 n n C3 H33 PGO sing 246 n n O1 HO1 PGO sing 247 n n O2 HO2 PGO sing 248 n n # _atom_sites.entry_id 3PBA _atom_sites.fract_transf_matrix[1][1] 0.01071 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002452 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016243 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008615 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZXG A 1 1 1 ZXG ZXG . D 3 PGO B 1 6128 6128 PGO PGO . E 4 HOH A 1 2 2 HOH HOH . E 4 HOH A 2 3 3 HOH HOH . E 4 HOH A 3 4 4 HOH HOH . E 4 HOH A 4 11 11 HOH HOH . E 4 HOH A 5 13 13 HOH HOH . E 4 HOH A 6 16 16 HOH HOH . E 4 HOH A 7 18 18 HOH HOH . E 4 HOH A 8 20 20 HOH HOH . E 4 HOH A 9 21 21 HOH HOH . E 4 HOH A 10 27 27 HOH HOH . E 4 HOH A 11 33 33 HOH HOH . E 4 HOH A 12 34 34 HOH HOH . E 4 HOH A 13 38 38 HOH HOH . E 4 HOH A 14 39 39 HOH HOH . E 4 HOH A 15 45 45 HOH HOH . E 4 HOH A 16 47 47 HOH HOH . E 4 HOH A 17 48 48 HOH HOH . E 4 HOH A 18 49 49 HOH HOH . E 4 HOH A 19 51 51 HOH HOH . E 4 HOH A 20 55 55 HOH HOH . E 4 HOH A 21 57 57 HOH HOH . E 4 HOH A 22 59 59 HOH HOH . E 4 HOH A 23 61 61 HOH HOH . E 4 HOH A 24 66 66 HOH HOH . E 4 HOH A 25 71 71 HOH HOH . E 4 HOH A 26 75 75 HOH HOH . E 4 HOH A 27 77 77 HOH HOH . E 4 HOH A 28 78 78 HOH HOH . E 4 HOH A 29 79 79 HOH HOH . E 4 HOH A 30 82 82 HOH HOH . E 4 HOH A 31 85 85 HOH HOH . E 4 HOH A 32 86 86 HOH HOH . E 4 HOH A 33 88 88 HOH HOH . E 4 HOH A 34 89 89 HOH HOH . E 4 HOH A 35 91 91 HOH HOH . E 4 HOH A 36 92 92 HOH HOH . E 4 HOH A 37 93 93 HOH HOH . E 4 HOH A 38 94 94 HOH HOH . E 4 HOH A 39 103 103 HOH HOH . E 4 HOH A 40 106 106 HOH HOH . E 4 HOH A 41 109 109 HOH HOH . E 4 HOH A 42 110 110 HOH HOH . E 4 HOH A 43 111 111 HOH HOH . E 4 HOH A 44 117 117 HOH HOH . E 4 HOH A 45 122 122 HOH HOH . E 4 HOH A 46 124 124 HOH HOH . E 4 HOH A 47 131 131 HOH HOH . E 4 HOH A 48 135 135 HOH HOH . E 4 HOH A 49 139 139 HOH HOH . E 4 HOH A 50 153 153 HOH HOH . E 4 HOH A 51 159 159 HOH HOH . E 4 HOH A 52 167 167 HOH HOH . E 4 HOH A 53 180 180 HOH HOH . E 4 HOH A 54 182 182 HOH HOH . E 4 HOH A 55 188 188 HOH HOH . E 4 HOH A 56 189 189 HOH HOH . E 4 HOH A 57 478 192 HOH HOH . E 4 HOH A 58 479 193 HOH HOH . E 4 HOH A 59 480 195 HOH HOH . E 4 HOH A 60 481 196 HOH HOH . E 4 HOH A 61 482 205 HOH HOH . E 4 HOH A 62 483 206 HOH HOH . E 4 HOH A 63 484 208 HOH HOH . E 4 HOH A 64 485 209 HOH HOH . E 4 HOH A 65 486 210 HOH HOH . E 4 HOH A 66 487 211 HOH HOH . E 4 HOH A 67 488 214 HOH HOH . E 4 HOH A 68 489 216 HOH HOH . E 4 HOH A 69 490 217 HOH HOH . E 4 HOH A 70 491 218 HOH HOH . E 4 HOH A 71 492 219 HOH HOH . E 4 HOH A 72 493 220 HOH HOH . E 4 HOH A 73 494 222 HOH HOH . E 4 HOH A 74 495 223 HOH HOH . E 4 HOH A 75 496 225 HOH HOH . E 4 HOH A 76 497 228 HOH HOH . E 4 HOH A 77 498 200 HOH HOH . F 4 HOH B 1 1 1 HOH HOH . F 4 HOH B 2 5 5 HOH HOH . F 4 HOH B 3 7 7 HOH HOH . F 4 HOH B 4 8 8 HOH HOH . F 4 HOH B 5 9 9 HOH HOH . F 4 HOH B 6 14 14 HOH HOH . F 4 HOH B 7 17 17 HOH HOH . F 4 HOH B 8 19 19 HOH HOH . F 4 HOH B 9 22 22 HOH HOH . F 4 HOH B 10 23 23 HOH HOH . F 4 HOH B 11 24 24 HOH HOH . F 4 HOH B 12 25 25 HOH HOH . F 4 HOH B 13 26 26 HOH HOH . F 4 HOH B 14 28 28 HOH HOH . F 4 HOH B 15 29 29 HOH HOH . F 4 HOH B 16 31 31 HOH HOH . F 4 HOH B 17 32 32 HOH HOH . F 4 HOH B 18 35 35 HOH HOH . F 4 HOH B 19 37 37 HOH HOH . F 4 HOH B 20 42 42 HOH HOH . F 4 HOH B 21 50 50 HOH HOH . F 4 HOH B 22 53 53 HOH HOH . F 4 HOH B 23 54 54 HOH HOH . F 4 HOH B 24 56 56 HOH HOH . F 4 HOH B 25 63 63 HOH HOH . F 4 HOH B 26 64 64 HOH HOH . F 4 HOH B 27 65 65 HOH HOH . F 4 HOH B 28 67 67 HOH HOH . F 4 HOH B 29 68 68 HOH HOH . F 4 HOH B 30 69 69 HOH HOH . F 4 HOH B 31 70 70 HOH HOH . F 4 HOH B 32 72 72 HOH HOH . F 4 HOH B 33 73 73 HOH HOH . F 4 HOH B 34 76 76 HOH HOH . F 4 HOH B 35 84 84 HOH HOH . F 4 HOH B 36 90 90 HOH HOH . F 4 HOH B 37 96 96 HOH HOH . F 4 HOH B 38 100 100 HOH HOH . F 4 HOH B 39 107 107 HOH HOH . F 4 HOH B 40 108 108 HOH HOH . F 4 HOH B 41 113 113 HOH HOH . F 4 HOH B 42 115 115 HOH HOH . F 4 HOH B 43 116 116 HOH HOH . F 4 HOH B 44 119 119 HOH HOH . F 4 HOH B 45 120 120 HOH HOH . F 4 HOH B 46 121 121 HOH HOH . F 4 HOH B 47 123 123 HOH HOH . F 4 HOH B 48 128 128 HOH HOH . F 4 HOH B 49 129 129 HOH HOH . F 4 HOH B 50 134 134 HOH HOH . F 4 HOH B 51 136 136 HOH HOH . F 4 HOH B 52 137 137 HOH HOH . F 4 HOH B 53 138 138 HOH HOH . F 4 HOH B 54 140 140 HOH HOH . F 4 HOH B 55 141 141 HOH HOH . F 4 HOH B 56 142 142 HOH HOH . F 4 HOH B 57 143 143 HOH HOH . F 4 HOH B 58 146 146 HOH HOH . F 4 HOH B 59 147 147 HOH HOH . F 4 HOH B 60 152 152 HOH HOH . F 4 HOH B 61 155 155 HOH HOH . F 4 HOH B 62 156 156 HOH HOH . F 4 HOH B 63 157 157 HOH HOH . F 4 HOH B 64 158 158 HOH HOH . F 4 HOH B 65 160 160 HOH HOH . F 4 HOH B 66 162 162 HOH HOH . F 4 HOH B 67 164 164 HOH HOH . F 4 HOH B 68 170 170 HOH HOH . F 4 HOH B 69 171 171 HOH HOH . F 4 HOH B 70 173 173 HOH HOH . F 4 HOH B 71 174 174 HOH HOH . F 4 HOH B 72 176 176 HOH HOH . F 4 HOH B 73 179 179 HOH HOH . F 4 HOH B 74 181 181 HOH HOH . F 4 HOH B 75 186 186 HOH HOH . F 4 HOH B 76 187 187 HOH HOH . F 4 HOH B 77 190 190 HOH HOH . F 4 HOH B 78 191 191 HOH HOH . F 4 HOH B 79 478 197 HOH HOH . F 4 HOH B 80 479 198 HOH HOH . F 4 HOH B 81 480 199 HOH HOH . F 4 HOH B 82 482 201 HOH HOH . F 4 HOH B 83 483 202 HOH HOH . F 4 HOH B 84 484 215 HOH HOH . F 4 HOH B 85 485 221 HOH HOH . F 4 HOH B 86 486 224 HOH HOH . F 4 HOH B 87 487 226 HOH HOH . F 4 HOH B 88 488 227 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGO . . . D 3 41.749 -18.162 9.035 1 47.73 ? C1 PGO 6128 B 1 HETATM 2 C C2 PGO . . . D 3 42.754 -17.011 8.92 1 69.5 ? C2 PGO 6128 B 1 HETATM 3 C C3 PGO . . . D 3 43.071 -16.407 10.295 1 41.93 ? C3 PGO 6128 B 1 HETATM 4 O O1 PGO . . . D 3 41.536 -18.76 7.751 1 47.96 ? O1 PGO 6128 B 1 HETATM 5 O O2 PGO . . . D 3 42.252 -16.014 8.023 1 66.21 ? O2 PGO 6128 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #