data_3PBL # _model_server_result.job_id saNydaWbW8PO4gbADJlD2Q _model_server_result.datetime_utc '2024-11-21 14:02:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pbl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1200}' # _entry.id 3PBL # _exptl.entry_id 3PBL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 340.845 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-chloro-5-ethyl-N-{[(2S)-1-ethylpyrrolidin-2-yl]methyl}-6-hydroxy-2-methoxybenzamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PBL _cell.length_a 88.828 _cell.length_b 92.492 _cell.length_c 176.116 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PBL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C GLC 1 C 1 GLC ? 1500 MAL 2 n C GLC 2 C 2 GLC ? 1500 MAL 2 n D GLC 1 D 1 GLC ? 1501 MAL 2 n D GLC 2 D 2 GLC ? 1501 MAL # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 112 A CYS 103 1_555 A SG CYS 190 A CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 427 A CYS 355 1_555 A SG CYS 430 A CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 B SG CYS 112 B CYS 103 1_555 B SG CYS 190 B CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf4 B SG CYS 427 B CYS 355 1_555 B SG CYS 430 B CYS 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? covale ? covale1 C O4 GLC . C GLC 1 1_555 C C1 GLC . C GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.461 sing covale ? covale2 D O4 GLC . D GLC 1 1_555 D C1 GLC . D GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.459 sing # _chem_comp.formula 'C17 H25 Cl N2 O3' _chem_comp.formula_weight 340.845 _chem_comp.id ETQ _chem_comp.mon_nstd_flag . _chem_comp.name 3-chloro-5-ethyl-N-{[(2S)-1-ethylpyrrolidin-2-yl]methyl}-6-hydroxy-2-methoxybenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 ETQ sing 83 n n C1 C2 ETQ doub 84 n y C1 C7 ETQ sing 85 n y N1 C8 ETQ sing 86 n n N1 C9 ETQ sing 87 n n CL1 C4 ETQ sing 88 n n C2 C3 ETQ sing 89 n y C2 C16 ETQ sing 90 n n N2 C10 ETQ sing 91 n n N2 C13 ETQ sing 92 n n N2 C14 ETQ sing 93 n n O2 C5 ETQ sing 94 n n O2 C6 ETQ sing 95 n n C3 C4 ETQ doub 96 n y O3 C8 ETQ doub 97 n n C4 C5 ETQ sing 98 n y C5 C7 ETQ doub 99 n y C7 C8 ETQ sing 100 n n C9 C10 ETQ sing 101 n n C10 C11 ETQ sing 102 n n C11 C12 ETQ sing 103 n n C12 C13 ETQ sing 104 n n C14 C15 ETQ sing 105 n n C16 C17 ETQ sing 106 n n N1 HN1 ETQ sing 107 n n O1 HO1 ETQ sing 108 n n C3 H3 ETQ sing 109 n n C6 H6 ETQ sing 110 n n C6 H6A ETQ sing 111 n n C6 H6B ETQ sing 112 n n C9 H9 ETQ sing 113 n n C9 H9A ETQ sing 114 n n C10 H10 ETQ sing 115 n n C11 H11 ETQ sing 116 n n C11 H11A ETQ sing 117 n n C12 H12 ETQ sing 118 n n C12 H12A ETQ sing 119 n n C13 H13 ETQ sing 120 n n C13 H13A ETQ sing 121 n n C14 H14 ETQ sing 122 n n C14 H14A ETQ sing 123 n n C15 H15 ETQ sing 124 n n C15 H15A ETQ sing 125 n n C15 H15B ETQ sing 126 n n C16 H16 ETQ sing 127 n n C16 H16A ETQ sing 128 n n C17 H17 ETQ sing 129 n n C17 H17A ETQ sing 130 n n C17 H17B ETQ sing 131 n n # _atom_sites.entry_id 3PBL _atom_sites.fract_transf_matrix[1][1] 0.011258 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010812 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005678 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ETQ A 1 1200 1200 ETQ RES . F 3 ETQ B 1 1200 1200 ETQ RES . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ETQ . . . F 3 2.374 12.219 -9.578 1 25.11 ? C1 ETQ 1200 B 1 HETATM 2 N N1 ETQ . . . F 3 5.967 12.776 -9.981 1 47.22 ? N1 ETQ 1200 B 1 HETATM 3 O O1 ETQ . . . F 3 2.015 12.323 -10.888 1 50.41 ? O1 ETQ 1200 B 1 HETATM 4 CL CL1 ETQ . . . F 3 3.536 11.801 -5.245 1 61.7 ? CL1 ETQ 1200 B 1 HETATM 5 C C2 ETQ . . . F 3 1.44 11.731 -8.657 1 52.72 ? C2 ETQ 1200 B 1 HETATM 6 N N2 ETQ . . . F 3 7.945 15.319 -10.215 1 33.84 ? N2 ETQ 1200 B 1 HETATM 7 O O2 ETQ . . . F 3 5.272 12.782 -7.394 1 72.24 ? O2 ETQ 1200 B 1 HETATM 8 C C3 ETQ . . . F 3 1.812 11.613 -7.318 1 91.82 ? C3 ETQ 1200 B 1 HETATM 9 O O3 ETQ . . . F 3 4.303 13.567 -11.29 1 89.78 ? O3 ETQ 1200 B 1 HETATM 10 C C4 ETQ . . . F 3 3.096 11.965 -6.907 1 15.5 ? C4 ETQ 1200 B 1 HETATM 11 C C5 ETQ . . . F 3 4.028 12.444 -7.828 1 27.8 ? C5 ETQ 1200 B 1 HETATM 12 C C6 ETQ . . . F 3 5.223 14.104 -6.843 1 11.62 ? C6 ETQ 1200 B 1 HETATM 13 C C7 ETQ . . . F 3 3.668 12.583 -9.177 1 80.14 ? C7 ETQ 1200 B 1 HETATM 14 C C8 ETQ . . . F 3 4.686 13.044 -10.246 1 60.55 ? C8 ETQ 1200 B 1 HETATM 15 C C9 ETQ . . . F 3 7.077 13.111 -10.893 1 41.79 ? C9 ETQ 1200 B 1 HETATM 16 C C10 ETQ . . . F 3 7.108 14.612 -11.202 1 68.32 ? C10 ETQ 1200 B 1 HETATM 17 C C11 ETQ . . . F 3 7.781 14.841 -12.551 1 99.32 ? C11 ETQ 1200 B 1 HETATM 18 C C12 ETQ . . . F 3 9.254 14.825 -12.178 1 19.24 ? C12 ETQ 1200 B 1 HETATM 19 C C13 ETQ . . . F 3 9.273 15.541 -10.827 1 25.88 ? C13 ETQ 1200 B 1 HETATM 20 C C14 ETQ . . . F 3 7.348 16.633 -9.92 1 134.16 ? C14 ETQ 1200 B 1 HETATM 21 C C15 ETQ . . . F 3 6.111 16.47 -9.033 1 74.4 ? C15 ETQ 1200 B 1 HETATM 22 C C16 ETQ . . . F 3 0.008 11.326 -9.021 1 45.7 ? C16 ETQ 1200 B 1 HETATM 23 C C17 ETQ . . . F 3 -0.893 12.548 -9.208 1 21.57 ? C17 ETQ 1200 B 1 # _model_server_stats.io_time_ms 102 _model_server_stats.parse_time_ms 37 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 1002 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 23 #