data_3PCO # _model_server_result.job_id GrISFe79JwNO4lm6WRDTeg _model_server_result.datetime_utc '2025-02-05 07:01:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pco # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":980}' # _entry.id 3PCO # _exptl.entry_id 3PCO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 165.189 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENYLALANINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec 6.1.1.20 # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PCO _cell.length_a 65.547 _cell.length_b 178.936 _cell.length_c 254.417 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PCO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # _chem_comp.formula 'C9 H11 N O2' _chem_comp.formula_weight 165.189 _chem_comp.id PHE _chem_comp.mon_nstd_flag y _chem_comp.name PHENYLALANINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PHE sing 274 n n N H PHE sing 275 n n N H2 PHE sing 276 n n CA C PHE sing 277 n n CA CB PHE sing 278 n n CA HA PHE sing 279 n n C O PHE doub 280 n n C OXT PHE sing 281 n n CB CG PHE sing 282 n n CB HB2 PHE sing 283 n n CB HB3 PHE sing 284 n n CG CD1 PHE doub 285 n y CG CD2 PHE sing 286 n y CD1 CE1 PHE sing 287 n y CD1 HD1 PHE sing 288 n n CD2 CE2 PHE doub 289 n y CD2 HD2 PHE sing 290 n n CE1 CZ PHE doub 291 n y CE1 HE1 PHE sing 292 n n CE2 CZ PHE sing 293 n y CE2 HE2 PHE sing 294 n n CZ HZ PHE sing 295 n n OXT HXT PHE sing 296 n n # _atom_sites.entry_id 3PCO _atom_sites.fract_transf_matrix[1][1] 0.015256 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005589 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003931 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PHE A 1 980 980 PHE PHE . F 4 AMP A 1 992 992 AMP AMP . G 3 PHE C 1 990 990 PHE PHE . H 4 AMP C 1 999 999 AMP AMP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PHE . . . E 3 -21.106 -9.646 52.693 1 85.94 ? N PHE 980 A 1 HETATM 2 C CA PHE . . . E 3 -20.757 -10.659 53.725 1 85.82 ? CA PHE 980 A 1 HETATM 3 C C PHE . . . E 3 -19.323 -11.046 53.458 1 87.04 ? C PHE 980 A 1 HETATM 4 O O PHE . . . E 3 -18.937 -11.185 52.277 1 87.61 ? O PHE 980 A 1 HETATM 5 C CB PHE . . . E 3 -21.669 -11.885 53.601 1 84.78 ? CB PHE 980 A 1 HETATM 6 C CG PHE . . . E 3 -21.475 -12.932 54.681 1 80.95 ? CG PHE 980 A 1 HETATM 7 C CD1 PHE . . . E 3 -21.063 -12.593 55.959 1 77.59 ? CD1 PHE 980 A 1 HETATM 8 C CD2 PHE . . . E 3 -21.755 -14.27 54.415 1 77.33 ? CD2 PHE 980 A 1 HETATM 9 C CE1 PHE . . . E 3 -20.91 -13.583 56.934 1 75.07 ? CE1 PHE 980 A 1 HETATM 10 C CE2 PHE . . . E 3 -21.598 -15.248 55.391 1 74.63 ? CE2 PHE 980 A 1 HETATM 11 C CZ PHE . . . E 3 -21.188 -14.903 56.645 1 73.37 ? CZ PHE 980 A 1 HETATM 12 O OXT PHE . . . E 3 -18.549 -11.217 54.419 1 87.79 ? OXT PHE 980 A 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 12 #