data_3PCV # _model_server_result.job_id yt4Hfkhtq2m2A5PAS8SLew _model_server_result.datetime_utc '2024-11-05 05:40:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pcv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 3PCV # _exptl.entry_id 3PCV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PCV _cell.length_a 168.0295 _cell.length_b 168.0295 _cell.length_c 168.0295 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PCV _symmetry.cell_setting ? _symmetry.Int_Tables_number 196 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 18_555 z,-x+1/2,-y+1/2 0 0 1 -1 0 0 0 -1 0 0 84.01475 84.01475 3 'crystal symmetry operation' 48_555 -y+1/2,-z+1/2,x 0 -1 0 0 0 -1 1 0 0 84.01475 84.01475 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 138 n n N1 HN11 GSH sing 139 n n N1 HN12 GSH sing 140 n n CA1 C1 GSH sing 141 n n CA1 CB1 GSH sing 142 n n CA1 HA1 GSH sing 143 n n C1 O11 GSH doub 144 n n C1 O12 GSH sing 145 n n O12 H12 GSH sing 146 n n CB1 CG1 GSH sing 147 n n CB1 HB12 GSH sing 148 n n CB1 HB13 GSH sing 149 n n CG1 CD1 GSH sing 150 n n CG1 HG12 GSH sing 151 n n CG1 HG13 GSH sing 152 n n CD1 OE1 GSH doub 153 n n CD1 N2 GSH sing 154 n n N2 CA2 GSH sing 155 n n N2 HN2 GSH sing 156 n n CA2 C2 GSH sing 157 n n CA2 CB2 GSH sing 158 n n CA2 HA2 GSH sing 159 n n C2 O2 GSH doub 160 n n C2 N3 GSH sing 161 n n CB2 SG2 GSH sing 162 n n CB2 HB22 GSH sing 163 n n CB2 HB23 GSH sing 164 n n SG2 HSG GSH sing 165 n n N3 CA3 GSH sing 166 n n N3 HN3 GSH sing 167 n n CA3 C3 GSH sing 168 n n CA3 HA31 GSH sing 169 n n CA3 HA32 GSH sing 170 n n C3 O31 GSH doub 171 n n C3 O32 GSH sing 172 n n O32 H32 GSH sing 173 n n # _atom_sites.entry_id 3PCV _atom_sites.fract_transf_matrix[1][1] 0.005951 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005951 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005951 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GSH A 1 201 201 GSH GTT . C 3 LMT A 1 203 203 LMT LMT . D 3 LMT A 1 204 204 LMT LMT . E 3 LMT A 1 205 205 LMT LMT . F 3 LMT A 1 206 206 LMT LMT . G 3 LMT A 1 207 207 LMT LMT . H 3 LMT A 1 208 208 LMT LMT . I 3 LMT A 1 209 209 LMT LMT . J 3 LMT A 1 210 210 LMT LMT . K 3 LMT A 1 211 211 LMT LMT . L 3 LMT A 1 212 212 LMT LMT . M 3 LMT A 1 213 213 LMT LMT . N 4 EDO A 1 214 214 EDO EDO . O 4 EDO A 1 215 215 EDO EDO . P 4 EDO A 1 216 216 EDO EDO . Q 4 EDO A 1 217 217 EDO EDO . R 5 UNL A 1 218 218 UNL UNK . S 5 UNL A 1 219 219 UNL UNK . T 5 UNL A 1 221 221 UNL UNK . U 5 UNL A 1 223 223 UNL UNK . V 6 SO4 A 1 250 250 SO4 SO4 . W 6 SO4 A 1 251 251 SO4 SO4 . X 7 HOH A 1 301 301 HOH HOH . X 7 HOH A 2 302 302 HOH HOH . X 7 HOH A 3 303 303 HOH HOH . X 7 HOH A 4 304 304 HOH HOH . X 7 HOH A 5 305 305 HOH HOH . X 7 HOH A 6 306 306 HOH HOH . X 7 HOH A 7 307 307 HOH HOH . X 7 HOH A 8 308 308 HOH HOH . X 7 HOH A 9 309 309 HOH HOH . X 7 HOH A 10 310 310 HOH HOH . X 7 HOH A 11 311 311 HOH HOH . X 7 HOH A 12 312 312 HOH HOH . X 7 HOH A 13 313 313 HOH HOH . X 7 HOH A 14 314 314 HOH HOH . X 7 HOH A 15 315 315 HOH HOH . X 7 HOH A 16 316 316 HOH HOH . X 7 HOH A 17 317 317 HOH HOH . X 7 HOH A 18 318 318 HOH HOH . X 7 HOH A 19 319 319 HOH HOH . X 7 HOH A 20 320 320 HOH HOH . X 7 HOH A 21 321 321 HOH HOH . X 7 HOH A 22 322 322 HOH HOH . X 7 HOH A 23 323 323 HOH HOH . X 7 HOH A 24 324 324 HOH HOH . X 7 HOH A 25 325 325 HOH HOH . X 7 HOH A 26 326 326 HOH HOH . X 7 HOH A 27 327 327 HOH HOH . X 7 HOH A 28 328 328 HOH HOH . X 7 HOH A 29 329 329 HOH HOH . X 7 HOH A 30 330 330 HOH HOH . X 7 HOH A 31 331 331 HOH HOH . X 7 HOH A 32 332 332 HOH HOH . X 7 HOH A 33 333 333 HOH HOH . X 7 HOH A 34 334 334 HOH HOH . X 7 HOH A 35 335 335 HOH HOH . X 7 HOH A 36 336 336 HOH HOH . X 7 HOH A 37 337 337 HOH HOH . X 7 HOH A 38 338 338 HOH HOH . X 7 HOH A 39 339 339 HOH HOH . X 7 HOH A 40 340 340 HOH HOH . X 7 HOH A 41 341 341 HOH HOH . X 7 HOH A 42 342 342 HOH HOH . X 7 HOH A 43 343 343 HOH HOH . X 7 HOH A 44 344 344 HOH HOH . X 7 HOH A 45 345 345 HOH HOH . X 7 HOH A 46 346 346 HOH HOH . X 7 HOH A 47 347 347 HOH HOH . X 7 HOH A 48 348 348 HOH HOH . X 7 HOH A 49 349 349 HOH HOH . X 7 HOH A 50 350 350 HOH HOH . X 7 HOH A 51 351 351 HOH HOH . X 7 HOH A 52 352 352 HOH HOH . X 7 HOH A 53 353 353 HOH HOH . X 7 HOH A 54 354 354 HOH HOH . X 7 HOH A 55 355 355 HOH HOH . X 7 HOH A 56 356 356 HOH HOH . X 7 HOH A 57 357 357 HOH HOH . X 7 HOH A 58 358 358 HOH HOH . X 7 HOH A 59 359 359 HOH HOH . X 7 HOH A 60 360 360 HOH HOH . X 7 HOH A 61 361 361 HOH HOH . X 7 HOH A 62 362 362 HOH HOH . X 7 HOH A 63 363 363 HOH HOH . X 7 HOH A 64 364 364 HOH HOH . X 7 HOH A 65 365 365 HOH HOH . X 7 HOH A 66 367 367 HOH HOH . X 7 HOH A 67 368 368 HOH HOH . X 7 HOH A 68 369 369 HOH HOH . X 7 HOH A 69 372 372 HOH HOH . X 7 HOH A 70 374 374 HOH HOH . X 7 HOH A 71 376 376 HOH HOH . X 7 HOH A 72 377 377 HOH HOH . X 7 HOH A 73 378 378 HOH HOH . X 7 HOH A 74 380 380 HOH HOH . X 7 HOH A 75 381 381 HOH HOH . X 7 HOH A 76 382 382 HOH HOH . X 7 HOH A 77 384 384 HOH HOH . X 7 HOH A 78 385 385 HOH HOH . X 7 HOH A 79 387 387 HOH HOH . X 7 HOH A 80 388 388 HOH HOH . X 7 HOH A 81 389 389 HOH HOH . X 7 HOH A 82 390 390 HOH HOH . X 7 HOH A 83 391 391 HOH HOH . X 7 HOH A 84 392 392 HOH HOH . X 7 HOH A 85 394 394 HOH HOH . X 7 HOH A 86 397 397 HOH HOH . X 7 HOH A 87 398 398 HOH HOH . X 7 HOH A 88 399 399 HOH HOH . X 7 HOH A 89 400 400 HOH HOH . X 7 HOH A 90 402 402 HOH HOH . X 7 HOH A 91 403 403 HOH HOH . X 7 HOH A 92 405 405 HOH HOH . X 7 HOH A 93 406 406 HOH HOH . X 7 HOH A 94 407 407 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . B 2 34.45 57.127 23.957 1 23.52 ? N1 GSH 201 A 1 HETATM 2 C CA1 GSH . . . B 2 35.47 56.927 22.919 1 25.55 ? CA1 GSH 201 A 1 HETATM 3 C C1 GSH . . . B 2 36.631 56.119 23.514 1 29.11 ? C1 GSH 201 A 1 HETATM 4 O O11 GSH . . . B 2 37.64 55.839 22.856 1 24.02 ? O11 GSH 201 A 1 HETATM 5 O O12 GSH . . . B 2 36.616 55.732 24.695 1 22.89 ? O12 GSH 201 A 1 HETATM 6 C CB1 GSH . . . B 2 35.932 58.307 22.4 1 22.81 ? CB1 GSH 201 A 1 HETATM 7 C CG1 GSH . . . B 2 37.105 58.321 21.389 1 23.02 ? CG1 GSH 201 A 1 HETATM 8 C CD1 GSH . . . B 2 36.886 57.344 20.243 1 28.99 ? CD1 GSH 201 A 1 HETATM 9 O OE1 GSH . . . B 2 35.726 57.4 19.47 1 26.71 ? OE1 GSH 201 A 1 HETATM 10 N N2 GSH . . . B 2 37.844 56.425 19.998 1 25.64 ? N2 GSH 201 A 1 HETATM 11 C CA2 GSH . . . B 2 37.775 55.49 18.9 1 23.01 ? CA2 GSH 201 A 1 HETATM 12 C C2 GSH . . . B 2 37.132 54.197 19.348 1 19.91 ? C2 GSH 201 A 1 HETATM 13 O O2 GSH . . . B 2 36.894 53.197 18.447 1 24.56 ? O2 GSH 201 A 1 HETATM 14 C CB2 GSH . . . B 2 39.198 55.225 18.357 1 29.19 ? CB2 GSH 201 A 1 HETATM 15 S SG2 GSH . . . B 2 40.243 54.735 19.78 1 30.06 ? SG2 GSH 201 A 1 HETATM 16 N N3 GSH . . . B 2 36.806 53.989 20.612 1 24.87 ? N3 GSH 201 A 1 HETATM 17 C CA3 GSH . . . B 2 36.555 52.628 21.062 1 27.04 ? CA3 GSH 201 A 1 HETATM 18 C C3 GSH . . . B 2 35.503 52.611 22.148 1 29.71 ? C3 GSH 201 A 1 HETATM 19 O O31 GSH . . . B 2 34.818 53.652 22.39 1 26.38 ? O31 GSH 201 A 1 HETATM 20 O O32 GSH . . . B 2 35.278 51.553 22.794 1 26.51 ? O32 GSH 201 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 20 #