data_3PEE # _model_server_result.job_id eWk2AGrEa74VYLJfk7somA _model_server_result.datetime_utc '2024-11-24 21:02:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pee # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":255}' # _entry.id 3PEE # _exptl.entry_id 3PEE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.48 _cell.angle_gamma 90 _cell.entry_id 3PEE _cell.length_a 128.11 _cell.length_b 45.71 _cell.length_c 87.35 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PEE _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,E,G 1 1 A,C,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C CA CA . B CA 255 1_555 D O32 IHP . B IHP 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc2 C CA CA . B CA 255 1_555 D O23 IHP . B IHP 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc3 C CA CA . B CA 255 1_555 D O42 IHP . B IHP 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.198 ? metalc ? metalc4 C CA CA . B CA 255 1_555 F O HOH . B HOH 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.657 ? metalc ? metalc5 C CA CA . B CA 255 1_555 E O23 IHP . A IHP 255 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc6 C CA CA . B CA 255 1_555 E O32 IHP . A IHP 255 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc7 C CA CA . B CA 255 1_555 G O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3PEE _atom_sites.fract_transf_matrix[1][1] 0.007806 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001871 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021877 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011773 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA B 1 255 1 CA CA . D 3 IHP B 1 256 1 IHP IHP . E 3 IHP A 1 255 1 IHP IHP . F 4 HOH B 1 257 1 HOH HOH . F 4 HOH B 2 258 7 HOH HOH . F 4 HOH B 3 259 8 HOH HOH . F 4 HOH B 4 260 10 HOH HOH . F 4 HOH B 5 261 13 HOH HOH . F 4 HOH B 6 262 14 HOH HOH . F 4 HOH B 7 263 16 HOH HOH . F 4 HOH B 8 264 19 HOH HOH . F 4 HOH B 9 265 21 HOH HOH . F 4 HOH B 10 266 22 HOH HOH . F 4 HOH B 11 267 27 HOH HOH . F 4 HOH B 12 268 28 HOH HOH . F 4 HOH B 13 269 30 HOH HOH . F 4 HOH B 14 270 31 HOH HOH . F 4 HOH B 15 271 32 HOH HOH . F 4 HOH B 16 272 34 HOH HOH . F 4 HOH B 17 273 37 HOH HOH . F 4 HOH B 18 274 38 HOH HOH . F 4 HOH B 19 275 41 HOH HOH . F 4 HOH B 20 276 42 HOH HOH . F 4 HOH B 21 277 43 HOH HOH . F 4 HOH B 22 278 44 HOH HOH . F 4 HOH B 23 279 45 HOH HOH . F 4 HOH B 24 280 46 HOH HOH . F 4 HOH B 25 281 47 HOH HOH . F 4 HOH B 26 282 50 HOH HOH . F 4 HOH B 27 283 52 HOH HOH . F 4 HOH B 28 284 53 HOH HOH . F 4 HOH B 29 285 55 HOH HOH . F 4 HOH B 30 286 56 HOH HOH . F 4 HOH B 31 287 61 HOH HOH . F 4 HOH B 32 288 62 HOH HOH . F 4 HOH B 33 289 64 HOH HOH . F 4 HOH B 34 290 65 HOH HOH . F 4 HOH B 35 291 66 HOH HOH . F 4 HOH B 36 292 74 HOH HOH . F 4 HOH B 37 293 75 HOH HOH . F 4 HOH B 38 294 77 HOH HOH . F 4 HOH B 39 295 79 HOH HOH . F 4 HOH B 40 296 80 HOH HOH . F 4 HOH B 41 297 84 HOH HOH . F 4 HOH B 42 298 87 HOH HOH . F 4 HOH B 43 299 88 HOH HOH . F 4 HOH B 44 300 90 HOH HOH . F 4 HOH B 45 301 91 HOH HOH . F 4 HOH B 46 302 95 HOH HOH . F 4 HOH B 47 303 96 HOH HOH . F 4 HOH B 48 304 102 HOH HOH . F 4 HOH B 49 305 104 HOH HOH . F 4 HOH B 50 306 107 HOH HOH . F 4 HOH B 51 307 108 HOH HOH . F 4 HOH B 52 308 111 HOH HOH . F 4 HOH B 53 309 112 HOH HOH . F 4 HOH B 54 310 117 HOH HOH . F 4 HOH B 55 311 131 HOH HOH . F 4 HOH B 56 312 136 HOH HOH . F 4 HOH B 57 313 139 HOH HOH . F 4 HOH B 58 314 141 HOH HOH . F 4 HOH B 59 315 142 HOH HOH . F 4 HOH B 60 316 150 HOH HOH . F 4 HOH B 61 317 151 HOH HOH . F 4 HOH B 62 318 153 HOH HOH . F 4 HOH B 63 319 154 HOH HOH . F 4 HOH B 64 320 155 HOH HOH . F 4 HOH B 65 321 156 HOH HOH . F 4 HOH B 66 322 160 HOH HOH . F 4 HOH B 67 323 161 HOH HOH . F 4 HOH B 68 325 165 HOH HOH . F 4 HOH B 69 326 166 HOH HOH . F 4 HOH B 70 327 172 HOH HOH . F 4 HOH B 71 328 173 HOH HOH . F 4 HOH B 72 329 177 HOH HOH . F 4 HOH B 73 330 179 HOH HOH . F 4 HOH B 74 331 181 HOH HOH . F 4 HOH B 75 332 182 HOH HOH . F 4 HOH B 76 333 186 HOH HOH . F 4 HOH B 77 334 187 HOH HOH . F 4 HOH B 78 335 188 HOH HOH . F 4 HOH B 79 336 194 HOH HOH . F 4 HOH B 80 337 196 HOH HOH . F 4 HOH B 81 338 198 HOH HOH . F 4 HOH B 82 339 202 HOH HOH . F 4 HOH B 83 340 206 HOH HOH . F 4 HOH B 84 341 207 HOH HOH . F 4 HOH B 85 342 208 HOH HOH . F 4 HOH B 86 343 209 HOH HOH . F 4 HOH B 87 344 210 HOH HOH . F 4 HOH B 88 345 211 HOH HOH . F 4 HOH B 89 346 212 HOH HOH . F 4 HOH B 90 347 213 HOH HOH . G 4 HOH A 1 256 2 HOH HOH . G 4 HOH A 2 257 3 HOH HOH . G 4 HOH A 3 258 4 HOH HOH . G 4 HOH A 4 259 5 HOH HOH . G 4 HOH A 5 260 6 HOH HOH . G 4 HOH A 6 261 9 HOH HOH . G 4 HOH A 7 262 11 HOH HOH . G 4 HOH A 8 263 12 HOH HOH . G 4 HOH A 9 264 15 HOH HOH . G 4 HOH A 10 265 17 HOH HOH . G 4 HOH A 11 266 18 HOH HOH . G 4 HOH A 12 267 20 HOH HOH . G 4 HOH A 13 268 23 HOH HOH . G 4 HOH A 14 269 24 HOH HOH . G 4 HOH A 15 270 25 HOH HOH . G 4 HOH A 16 271 26 HOH HOH . G 4 HOH A 17 272 29 HOH HOH . G 4 HOH A 18 273 33 HOH HOH . G 4 HOH A 19 274 35 HOH HOH . G 4 HOH A 20 275 36 HOH HOH . G 4 HOH A 21 276 39 HOH HOH . G 4 HOH A 22 277 40 HOH HOH . G 4 HOH A 23 278 48 HOH HOH . G 4 HOH A 24 279 49 HOH HOH . G 4 HOH A 25 280 51 HOH HOH . G 4 HOH A 26 281 54 HOH HOH . G 4 HOH A 27 282 57 HOH HOH . G 4 HOH A 28 283 58 HOH HOH . G 4 HOH A 29 284 59 HOH HOH . G 4 HOH A 30 285 60 HOH HOH . G 4 HOH A 31 286 63 HOH HOH . G 4 HOH A 32 287 67 HOH HOH . G 4 HOH A 33 288 68 HOH HOH . G 4 HOH A 34 289 69 HOH HOH . G 4 HOH A 35 290 70 HOH HOH . G 4 HOH A 36 291 71 HOH HOH . G 4 HOH A 37 292 72 HOH HOH . G 4 HOH A 38 293 73 HOH HOH . G 4 HOH A 39 294 76 HOH HOH . G 4 HOH A 40 295 78 HOH HOH . G 4 HOH A 41 296 81 HOH HOH . G 4 HOH A 42 297 82 HOH HOH . G 4 HOH A 43 298 83 HOH HOH . G 4 HOH A 44 299 85 HOH HOH . G 4 HOH A 45 300 86 HOH HOH . G 4 HOH A 46 301 89 HOH HOH . G 4 HOH A 47 302 92 HOH HOH . G 4 HOH A 48 303 93 HOH HOH . G 4 HOH A 49 304 94 HOH HOH . G 4 HOH A 50 305 97 HOH HOH . G 4 HOH A 51 306 98 HOH HOH . G 4 HOH A 52 307 99 HOH HOH . G 4 HOH A 53 308 100 HOH HOH . G 4 HOH A 54 309 101 HOH HOH . G 4 HOH A 55 310 103 HOH HOH . G 4 HOH A 56 311 105 HOH HOH . G 4 HOH A 57 312 106 HOH HOH . G 4 HOH A 58 313 109 HOH HOH . G 4 HOH A 59 314 110 HOH HOH . G 4 HOH A 60 315 113 HOH HOH . G 4 HOH A 61 316 114 HOH HOH . G 4 HOH A 62 317 115 HOH HOH . G 4 HOH A 63 318 116 HOH HOH . G 4 HOH A 64 319 118 HOH HOH . G 4 HOH A 65 320 119 HOH HOH . G 4 HOH A 66 321 120 HOH HOH . G 4 HOH A 67 322 121 HOH HOH . G 4 HOH A 68 323 122 HOH HOH . G 4 HOH A 69 324 164 HOH HOH . G 4 HOH A 70 325 124 HOH HOH . G 4 HOH A 71 326 125 HOH HOH . G 4 HOH A 72 327 126 HOH HOH . G 4 HOH A 73 328 127 HOH HOH . G 4 HOH A 74 329 128 HOH HOH . G 4 HOH A 75 330 129 HOH HOH . G 4 HOH A 76 331 130 HOH HOH . G 4 HOH A 77 332 132 HOH HOH . G 4 HOH A 78 333 133 HOH HOH . G 4 HOH A 79 334 134 HOH HOH . G 4 HOH A 80 335 135 HOH HOH . G 4 HOH A 81 336 137 HOH HOH . G 4 HOH A 82 337 138 HOH HOH . G 4 HOH A 83 338 140 HOH HOH . G 4 HOH A 84 339 143 HOH HOH . G 4 HOH A 85 340 144 HOH HOH . G 4 HOH A 86 341 145 HOH HOH . G 4 HOH A 87 342 146 HOH HOH . G 4 HOH A 88 343 147 HOH HOH . G 4 HOH A 89 344 148 HOH HOH . G 4 HOH A 90 345 149 HOH HOH . G 4 HOH A 91 346 152 HOH HOH . G 4 HOH A 92 347 157 HOH HOH . G 4 HOH A 93 348 158 HOH HOH . G 4 HOH A 94 349 159 HOH HOH . G 4 HOH A 95 350 162 HOH HOH . G 4 HOH A 96 351 163 HOH HOH . G 4 HOH A 97 352 167 HOH HOH . G 4 HOH A 98 353 168 HOH HOH . G 4 HOH A 99 354 169 HOH HOH . G 4 HOH A 100 355 170 HOH HOH . G 4 HOH A 101 356 171 HOH HOH . G 4 HOH A 102 357 174 HOH HOH . G 4 HOH A 103 358 175 HOH HOH . G 4 HOH A 104 359 176 HOH HOH . G 4 HOH A 105 360 178 HOH HOH . G 4 HOH A 106 361 180 HOH HOH . G 4 HOH A 107 362 183 HOH HOH . G 4 HOH A 108 363 184 HOH HOH . G 4 HOH A 109 364 185 HOH HOH . G 4 HOH A 110 365 189 HOH HOH . G 4 HOH A 111 366 190 HOH HOH . G 4 HOH A 112 367 191 HOH HOH . G 4 HOH A 113 368 192 HOH HOH . G 4 HOH A 114 369 193 HOH HOH . G 4 HOH A 115 370 195 HOH HOH . G 4 HOH A 116 371 197 HOH HOH . G 4 HOH A 117 372 199 HOH HOH . G 4 HOH A 118 373 200 HOH HOH . G 4 HOH A 119 374 201 HOH HOH . G 4 HOH A 120 375 203 HOH HOH . G 4 HOH A 121 376 204 HOH HOH . G 4 HOH A 122 377 205 HOH HOH . G 4 HOH A 123 378 214 HOH HOH . G 4 HOH A 124 379 215 HOH HOH . G 4 HOH A 125 380 216 HOH HOH . G 4 HOH A 126 381 217 HOH HOH . G 4 HOH A 127 382 218 HOH HOH . G 4 HOH A 128 383 123 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -26.228 _atom_site.Cartn_y -10.532 _atom_site.Cartn_z 24.589 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.1 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 255 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #