data_3PEQ # _model_server_result.job_id NNC240xPxdBGM9ENuF3eVw _model_server_result.datetime_utc '2024-11-16 07:56:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3peq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":2}' # _entry.id 3PEQ # _exptl.entry_id 3PEQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 549.701 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "[(4-{butyl[2-methyl-4'-(methylsulfanyl)biphenyl-3-yl]sulfamoyl}naphthalen-1-yl)oxy]acetic acid" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.76 _cell.angle_gamma 90 _cell.entry_id 3PEQ _cell.length_a 39.472 _cell.length_b 95.535 _cell.length_c 96.537 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PEQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,N 1 1 B,J,K,L,M,O 2 1 A,C,D,E,F,G,H,I,N 3 1 B,J,K,L,M,O 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y+1/2,-z+1 -1 0 0 0 1 0 0 0 -1 26.437201 47.7675 95.652948 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 J N N # _chem_comp.formula 'C30 H31 N O5 S2' _chem_comp.formula_weight 549.701 _chem_comp.id 3EQ _chem_comp.mon_nstd_flag . _chem_comp.name "[(4-{butyl[2-methyl-4'-(methylsulfanyl)biphenyl-3-yl]sulfamoyl}naphthalen-1-yl)oxy]acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 3EQ sing 1 n n C1 H1 3EQ sing 2 n n C1 H1A 3EQ sing 3 n n C1 H1B 3EQ sing 4 n n C2 C3 3EQ sing 5 n n C2 H2 3EQ sing 6 n n C2 H2A 3EQ sing 7 n n C4 C3 3EQ sing 8 n n C3 H3 3EQ sing 9 n n C3 H3A 3EQ sing 10 n n N5 C4 3EQ sing 11 n n C4 H4 3EQ sing 12 n n C4 H4A 3EQ sing 13 n n C6 N5 3EQ sing 14 n n N5 S21 3EQ sing 15 n n C11 C6 3EQ doub 16 n y C6 C7 3EQ sing 17 n y C8 C7 3EQ doub 18 n y C7 H7 3EQ sing 19 n n C9 C8 3EQ sing 20 n y C8 H8 3EQ sing 21 n n C10 C9 3EQ doub 22 n y C9 H9 3EQ sing 23 n n C13 C10 3EQ sing 24 n y C10 C11 3EQ sing 25 n y C12 C11 3EQ sing 26 n n C12 H12 3EQ sing 27 n n C12 H12A 3EQ sing 28 n n C12 H12B 3EQ sing 29 n n C14 C13 3EQ doub 30 n y C20 C13 3EQ sing 31 n y C15 C14 3EQ sing 32 n y C14 H14 3EQ sing 33 n n C16 C15 3EQ doub 34 n y C15 H15 3EQ sing 35 n n S17 C16 3EQ sing 36 n n C16 C19 3EQ sing 37 n y C18 S17 3EQ sing 38 n n C18 H18 3EQ sing 39 n n C18 H18A 3EQ sing 40 n n C18 H18B 3EQ sing 41 n n C19 C20 3EQ doub 42 n y C19 H19 3EQ sing 43 n n C20 H20 3EQ sing 44 n n C24 S21 3EQ sing 45 n n S21 O22 3EQ doub 46 n n S21 O23 3EQ doub 47 n n C38 C24 3EQ doub 48 n y C24 C25 3EQ sing 49 n y C26 C25 3EQ doub 50 n y C25 H25 3EQ sing 51 n n C27 C26 3EQ sing 52 n y C26 H26 3EQ sing 53 n n C33 C27 3EQ doub 54 n y O28 C27 3EQ sing 55 n n O28 C29 3EQ sing 56 n n C29 C30 3EQ sing 57 n n C29 H29 3EQ sing 58 n n C29 H29A 3EQ sing 59 n n C30 O31 3EQ doub 60 n n C30 O32 3EQ sing 61 n n O32 HO32 3EQ sing 62 n n C34 C33 3EQ sing 63 n y C33 C38 3EQ sing 64 n y C35 C34 3EQ doub 65 n y C34 H34 3EQ sing 66 n n C35 C36 3EQ sing 67 n y C35 H35 3EQ sing 68 n n C36 C37 3EQ doub 69 n y C36 H36 3EQ sing 70 n n C37 C38 3EQ sing 71 n y C37 H37 3EQ sing 72 n n # _atom_sites.entry_id 3PEQ _atom_sites.fract_transf_matrix[1][1] 0.025334 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003453 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010467 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010454 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3EQ A 1 1 1 3EQ 3EQ . D 3 JZR A 1 478 1 JZR JZR . E 3 JZR A 1 3 3 JZR JZR . F 4 IOD A 1 2 2 IOD IOD . G 4 IOD A 1 6 6 IOD IOD . H 4 IOD A 1 7 7 IOD IOD . I 4 IOD A 1 8 8 IOD IOD . J 2 3EQ B 1 2 2 3EQ 3EQ . K 3 JZR B 1 478 2 JZR JZR . L 4 IOD B 1 3 3 IOD IOD . M 4 IOD B 1 5 5 IOD IOD . N 5 HOH A 1 4 4 HOH HOH . N 5 HOH A 2 5 5 HOH HOH . N 5 HOH A 3 9 9 HOH HOH . N 5 HOH A 4 11 11 HOH HOH . N 5 HOH A 5 13 13 HOH HOH . N 5 HOH A 6 14 14 HOH HOH . N 5 HOH A 7 16 16 HOH HOH . N 5 HOH A 8 17 17 HOH HOH . N 5 HOH A 9 19 19 HOH HOH . N 5 HOH A 10 20 20 HOH HOH . N 5 HOH A 11 23 23 HOH HOH . N 5 HOH A 12 24 24 HOH HOH . N 5 HOH A 13 27 27 HOH HOH . N 5 HOH A 14 28 28 HOH HOH . N 5 HOH A 15 29 29 HOH HOH . N 5 HOH A 16 30 30 HOH HOH . N 5 HOH A 17 35 35 HOH HOH . N 5 HOH A 18 36 36 HOH HOH . N 5 HOH A 19 38 38 HOH HOH . N 5 HOH A 20 41 41 HOH HOH . N 5 HOH A 21 42 42 HOH HOH . N 5 HOH A 22 43 43 HOH HOH . N 5 HOH A 23 44 44 HOH HOH . N 5 HOH A 24 47 47 HOH HOH . N 5 HOH A 25 50 50 HOH HOH . N 5 HOH A 26 51 51 HOH HOH . N 5 HOH A 27 52 52 HOH HOH . N 5 HOH A 28 53 53 HOH HOH . N 5 HOH A 29 55 55 HOH HOH . N 5 HOH A 30 56 56 HOH HOH . N 5 HOH A 31 57 57 HOH HOH . N 5 HOH A 32 58 58 HOH HOH . N 5 HOH A 33 59 59 HOH HOH . N 5 HOH A 34 61 61 HOH HOH . N 5 HOH A 35 62 62 HOH HOH . N 5 HOH A 36 63 63 HOH HOH . N 5 HOH A 37 64 64 HOH HOH . N 5 HOH A 38 65 65 HOH HOH . N 5 HOH A 39 66 66 HOH HOH . N 5 HOH A 40 69 69 HOH HOH . N 5 HOH A 41 72 72 HOH HOH . N 5 HOH A 42 73 73 HOH HOH . N 5 HOH A 43 74 74 HOH HOH . N 5 HOH A 44 76 76 HOH HOH . N 5 HOH A 45 77 77 HOH HOH . N 5 HOH A 46 78 78 HOH HOH . N 5 HOH A 47 79 79 HOH HOH . N 5 HOH A 48 81 81 HOH HOH . N 5 HOH A 49 84 84 HOH HOH . N 5 HOH A 50 85 85 HOH HOH . N 5 HOH A 51 86 86 HOH HOH . N 5 HOH A 52 88 88 HOH HOH . N 5 HOH A 53 90 90 HOH HOH . N 5 HOH A 54 91 91 HOH HOH . N 5 HOH A 55 92 92 HOH HOH . N 5 HOH A 56 93 93 HOH HOH . N 5 HOH A 57 96 96 HOH HOH . N 5 HOH A 58 99 99 HOH HOH . N 5 HOH A 59 100 100 HOH HOH . N 5 HOH A 60 102 102 HOH HOH . N 5 HOH A 61 106 106 HOH HOH . N 5 HOH A 62 108 108 HOH HOH . N 5 HOH A 63 109 109 HOH HOH . N 5 HOH A 64 111 111 HOH HOH . N 5 HOH A 65 112 112 HOH HOH . N 5 HOH A 66 114 114 HOH HOH . N 5 HOH A 67 115 115 HOH HOH . N 5 HOH A 68 116 116 HOH HOH . N 5 HOH A 69 118 118 HOH HOH . N 5 HOH A 70 124 124 HOH HOH . N 5 HOH A 71 125 125 HOH HOH . N 5 HOH A 72 126 126 HOH HOH . N 5 HOH A 73 127 127 HOH HOH . N 5 HOH A 74 128 128 HOH HOH . N 5 HOH A 75 129 129 HOH HOH . N 5 HOH A 76 130 130 HOH HOH . N 5 HOH A 77 131 131 HOH HOH . N 5 HOH A 78 132 132 HOH HOH . N 5 HOH A 79 133 133 HOH HOH . N 5 HOH A 80 134 134 HOH HOH . N 5 HOH A 81 135 135 HOH HOH . N 5 HOH A 82 136 136 HOH HOH . N 5 HOH A 83 146 146 HOH HOH . N 5 HOH A 84 147 147 HOH HOH . N 5 HOH A 85 148 148 HOH HOH . N 5 HOH A 86 149 149 HOH HOH . N 5 HOH A 87 150 150 HOH HOH . N 5 HOH A 88 151 151 HOH HOH . N 5 HOH A 89 152 152 HOH HOH . N 5 HOH A 90 153 153 HOH HOH . N 5 HOH A 91 154 154 HOH HOH . N 5 HOH A 92 155 155 HOH HOH . N 5 HOH A 93 156 156 HOH HOH . N 5 HOH A 94 157 157 HOH HOH . N 5 HOH A 95 166 166 HOH HOH . N 5 HOH A 96 167 167 HOH HOH . N 5 HOH A 97 479 1 HOH HOH . N 5 HOH A 98 480 2 HOH HOH . N 5 HOH A 99 481 3 HOH HOH . N 5 HOH A 100 482 6 HOH HOH . N 5 HOH A 101 483 7 HOH HOH . N 5 HOH A 102 484 8 HOH HOH . O 5 HOH B 1 10 10 HOH HOH . O 5 HOH B 2 12 12 HOH HOH . O 5 HOH B 3 15 15 HOH HOH . O 5 HOH B 4 18 18 HOH HOH . O 5 HOH B 5 21 21 HOH HOH . O 5 HOH B 6 22 22 HOH HOH . O 5 HOH B 7 25 25 HOH HOH . O 5 HOH B 8 26 26 HOH HOH . O 5 HOH B 9 31 31 HOH HOH . O 5 HOH B 10 32 32 HOH HOH . O 5 HOH B 11 33 33 HOH HOH . O 5 HOH B 12 34 34 HOH HOH . O 5 HOH B 13 37 37 HOH HOH . O 5 HOH B 14 39 39 HOH HOH . O 5 HOH B 15 40 40 HOH HOH . O 5 HOH B 16 45 45 HOH HOH . O 5 HOH B 17 46 46 HOH HOH . O 5 HOH B 18 48 48 HOH HOH . O 5 HOH B 19 49 49 HOH HOH . O 5 HOH B 20 54 54 HOH HOH . O 5 HOH B 21 60 60 HOH HOH . O 5 HOH B 22 67 67 HOH HOH . O 5 HOH B 23 68 68 HOH HOH . O 5 HOH B 24 70 70 HOH HOH . O 5 HOH B 25 71 71 HOH HOH . O 5 HOH B 26 75 75 HOH HOH . O 5 HOH B 27 80 80 HOH HOH . O 5 HOH B 28 82 82 HOH HOH . O 5 HOH B 29 83 83 HOH HOH . O 5 HOH B 30 87 87 HOH HOH . O 5 HOH B 31 89 89 HOH HOH . O 5 HOH B 32 94 94 HOH HOH . O 5 HOH B 33 95 95 HOH HOH . O 5 HOH B 34 97 97 HOH HOH . O 5 HOH B 35 98 98 HOH HOH . O 5 HOH B 36 101 101 HOH HOH . O 5 HOH B 37 103 103 HOH HOH . O 5 HOH B 38 104 104 HOH HOH . O 5 HOH B 39 105 105 HOH HOH . O 5 HOH B 40 107 107 HOH HOH . O 5 HOH B 41 110 110 HOH HOH . O 5 HOH B 42 113 113 HOH HOH . O 5 HOH B 43 117 117 HOH HOH . O 5 HOH B 44 119 119 HOH HOH . O 5 HOH B 45 120 120 HOH HOH . O 5 HOH B 46 121 121 HOH HOH . O 5 HOH B 47 122 122 HOH HOH . O 5 HOH B 48 123 123 HOH HOH . O 5 HOH B 49 137 137 HOH HOH . O 5 HOH B 50 138 138 HOH HOH . O 5 HOH B 51 139 139 HOH HOH . O 5 HOH B 52 140 140 HOH HOH . O 5 HOH B 53 141 141 HOH HOH . O 5 HOH B 54 142 142 HOH HOH . O 5 HOH B 55 143 143 HOH HOH . O 5 HOH B 56 144 144 HOH HOH . O 5 HOH B 57 145 145 HOH HOH . O 5 HOH B 58 158 158 HOH HOH . O 5 HOH B 59 159 159 HOH HOH . O 5 HOH B 60 160 160 HOH HOH . O 5 HOH B 61 161 161 HOH HOH . O 5 HOH B 62 162 162 HOH HOH . O 5 HOH B 63 163 163 HOH HOH . O 5 HOH B 64 164 164 HOH HOH . O 5 HOH B 65 165 165 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3EQ . . . J 2 -1.57 6.464 13.035 1 42.69 ? C1 3EQ 2 B 1 HETATM 2 C C2 3EQ . . . J 2 -2.51 5.902 11.996 1 42.78 ? C2 3EQ 2 B 1 HETATM 3 C C3 3EQ . . . J 2 -2.425 4.397 11.96 1 41.36 ? C3 3EQ 2 B 1 HETATM 4 C C4 3EQ . . . J 2 -3.35 3.911 10.866 1 41.58 ? C4 3EQ 2 B 1 HETATM 5 N N5 3EQ . . . J 2 -3.435 2.43 10.754 1 40.47 ? N5 3EQ 2 B 1 HETATM 6 C C6 3EQ . . . J 2 -2.182 1.845 10.32 1 42.46 ? C6 3EQ 2 B 1 HETATM 7 C C7 3EQ . . . J 2 -1.324 1.29 11.243 1 43.15 ? C7 3EQ 2 B 1 HETATM 8 C C8 3EQ . . . J 2 -0.133 0.749 10.824 1 44.21 ? C8 3EQ 2 B 1 HETATM 9 C C9 3EQ . . . J 2 0.192 0.783 9.488 1 44.75 ? C9 3EQ 2 B 1 HETATM 10 C C10 3EQ . . . J 2 -0.646 1.3 8.545 1 44.89 ? C10 3EQ 2 B 1 HETATM 11 C C11 3EQ . . . J 2 -1.849 1.876 8.975 1 43.74 ? C11 3EQ 2 B 1 HETATM 12 C C12 3EQ . . . J 2 -2.806 2.495 8.007 1 44.48 ? C12 3EQ 2 B 1 HETATM 13 C C13 3EQ . . . J 2 -0.187 1.345 7.165 1 46.99 ? C13 3EQ 2 B 1 HETATM 14 C C14 3EQ . . . J 2 0.296 0.2 6.564 1 47.52 ? C14 3EQ 2 B 1 HETATM 15 C C15 3EQ . . . J 2 0.761 0.214 5.267 1 48.52 ? C15 3EQ 2 B 1 HETATM 16 C C16 3EQ . . . J 2 0.757 1.373 4.522 1 49.48 ? C16 3EQ 2 B 1 HETATM 17 S S17 3EQ . . . J 2 1.361 1.356 2.844 1 50.54 ? S17 3EQ 2 B 1 HETATM 18 C C18 3EQ . . . J 2 0.745 2.951 2.288 1 50 ? C18 3EQ 2 B 1 HETATM 19 C C19 3EQ . . . J 2 0.278 2.52 5.118 1 48.85 ? C19 3EQ 2 B 1 HETATM 20 C C20 3EQ . . . J 2 -0.178 2.507 6.42 1 47.64 ? C20 3EQ 2 B 1 HETATM 21 S S21 3EQ . . . J 2 -4.294 1.713 12.065 1 38.29 ? S21 3EQ 2 B 1 HETATM 22 O O22 3EQ . . . J 2 -5.538 2.439 12.24 1 37.25 ? O22 3EQ 2 B 1 HETATM 23 O O23 3EQ . . . J 2 -3.414 1.517 13.202 1 37.35 ? O23 3EQ 2 B 1 HETATM 24 C C24 3EQ . . . J 2 -4.854 0.087 11.576 1 37 ? C24 3EQ 2 B 1 HETATM 25 C C25 3EQ . . . J 2 -4.428 -0.986 12.328 1 36.7 ? C25 3EQ 2 B 1 HETATM 26 C C26 3EQ . . . J 2 -4.84 -2.262 12.006 1 36.46 ? C26 3EQ 2 B 1 HETATM 27 C C27 3EQ . . . J 2 -5.688 -2.461 10.934 1 37.26 ? C27 3EQ 2 B 1 HETATM 28 O O28 3EQ . . . J 2 -6.151 -3.723 10.556 1 37.72 ? O28 3EQ 2 B 1 HETATM 29 C C29 3EQ . . . J 2 -5.46 -4.775 11.242 1 38.06 ? C29 3EQ 2 B 1 HETATM 30 C C30 3EQ . . . J 2 -6.121 -5.123 12.575 1 37.46 ? C30 3EQ 2 B 1 HETATM 31 O O31 3EQ . . . J 2 -5.503 -5.991 13.236 1 36.93 ? O31 3EQ 2 B 1 HETATM 32 O O32 3EQ . . . J 2 -7.177 -4.509 12.884 1 36.8 ? O32 3EQ 2 B 1 HETATM 33 C C33 3EQ . . . J 2 -6.121 -1.38 10.189 1 37.97 ? C33 3EQ 2 B 1 HETATM 34 C C34 3EQ . . . J 2 -6.968 -1.58 9.117 1 38.39 ? C34 3EQ 2 B 1 HETATM 35 C C35 3EQ . . . J 2 -7.41 -0.521 8.356 1 37.79 ? C35 3EQ 2 B 1 HETATM 36 C C36 3EQ . . . J 2 -6.999 0.754 8.671 1 37.03 ? C36 3EQ 2 B 1 HETATM 37 C C37 3EQ . . . J 2 -6.152 0.957 9.737 1 37.14 ? C37 3EQ 2 B 1 HETATM 38 C C38 3EQ . . . J 2 -5.706 -0.097 10.505 1 37.1 ? C38 3EQ 2 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 38 #