data_3PF5
#
_model_server_result.job_id            1DCpRWprziw9G8co56m2bg 
_model_server_result.datetime_utc      '2025-03-21 02:33:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3pf5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":68}' 
#
_entry.id    3PF5 
#
_exptl.entry_id    3PF5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3PF5 
_cell.length_a            49.038 
_cell.length_b            49.769 
_cell.length_c            57.38 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3PF5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F 1 1 
B,C,G,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 E MG MG . A MG 68 1_555 F O HOH . A HOH 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc2 E MG MG . A MG 68 1_555 F O HOH . A HOH 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
metalc ? metalc3 E MG MG . A MG 68 1_555 F O HOH . A HOH 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? 
metalc ? metalc4 E MG MG . A MG 68 1_555 F O HOH . A HOH 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
metalc ? metalc5 E MG MG . A MG 68 1_555 F O HOH . A HOH 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? 
metalc ? metalc6 E MG MG . A MG 68 1_555 F O HOH . A HOH 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3PF5 
_atom_sites.fract_transf_matrix[1][1]    0.020392 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020093 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017428 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 MG A 1 68 1 MG MG . 
F 4 HOH A 1 69 69 HOH HOH . 
F 4 HOH A 2 70 70 HOH HOH . 
F 4 HOH A 3 71 71 HOH HOH . 
F 4 HOH A 4 72 72 HOH HOH . 
F 4 HOH A 5 73 73 HOH HOH . 
F 4 HOH A 6 74 74 HOH HOH . 
F 4 HOH A 7 75 75 HOH HOH . 
F 4 HOH A 8 76 76 HOH HOH . 
F 4 HOH A 9 77 1 HOH HOH . 
F 4 HOH A 10 78 78 HOH HOH . 
F 4 HOH A 11 79 79 HOH HOH . 
F 4 HOH A 12 80 80 HOH HOH . 
F 4 HOH A 13 81 81 HOH HOH . 
F 4 HOH A 14 82 82 HOH HOH . 
F 4 HOH A 15 83 83 HOH HOH . 
F 4 HOH A 16 84 84 HOH HOH . 
F 4 HOH A 17 85 2 HOH HOH . 
F 4 HOH A 18 86 3 HOH HOH . 
F 4 HOH A 19 87 4 HOH HOH . 
F 4 HOH A 20 88 5 HOH HOH . 
F 4 HOH A 21 89 6 HOH HOH . 
F 4 HOH A 22 90 7 HOH HOH . 
F 4 HOH A 23 91 8 HOH HOH . 
F 4 HOH A 24 92 9 HOH HOH . 
F 4 HOH A 25 93 93 HOH HOH . 
F 4 HOH A 26 94 94 HOH HOH . 
F 4 HOH A 27 95 95 HOH HOH . 
F 4 HOH A 28 96 96 HOH HOH . 
F 4 HOH A 29 97 97 HOH HOH . 
F 4 HOH A 30 98 10 HOH HOH . 
F 4 HOH A 31 99 11 HOH HOH . 
F 4 HOH A 32 100 12 HOH HOH . 
F 4 HOH A 33 101 13 HOH HOH . 
F 4 HOH A 34 102 14 HOH HOH . 
F 4 HOH A 35 103 15 HOH HOH . 
F 4 HOH A 36 104 104 HOH HOH . 
F 4 HOH A 37 105 105 HOH HOH . 
F 4 HOH A 38 106 106 HOH HOH . 
F 4 HOH A 39 107 18 HOH HOH . 
F 4 HOH A 40 108 19 HOH HOH . 
F 4 HOH A 41 109 109 HOH HOH . 
F 4 HOH A 42 110 20 HOH HOH . 
F 4 HOH A 43 111 111 HOH HOH . 
F 4 HOH A 44 112 112 HOH HOH . 
F 4 HOH A 45 113 113 HOH HOH . 
F 4 HOH A 46 114 114 HOH HOH . 
F 4 HOH A 47 115 21 HOH HOH . 
F 4 HOH A 48 116 22 HOH HOH . 
F 4 HOH A 49 117 117 HOH HOH . 
F 4 HOH A 50 118 118 HOH HOH . 
F 4 HOH A 51 119 119 HOH HOH . 
F 4 HOH A 52 120 120 HOH HOH . 
F 4 HOH A 53 121 121 HOH HOH . 
F 4 HOH A 54 122 122 HOH HOH . 
F 4 HOH A 55 123 24 HOH HOH . 
F 4 HOH A 56 124 124 HOH HOH . 
F 4 HOH A 57 125 125 HOH HOH . 
F 4 HOH A 58 126 26 HOH HOH . 
F 4 HOH A 59 127 28 HOH HOH . 
F 4 HOH A 60 128 29 HOH HOH . 
F 4 HOH A 61 129 63 HOH HOH . 
F 4 HOH A 62 130 130 HOH HOH . 
F 4 HOH A 63 131 68 HOH HOH . 
F 4 HOH A 64 132 132 HOH HOH . 
F 4 HOH A 65 133 61 HOH HOH . 
F 4 HOH A 66 134 134 HOH HOH . 
F 4 HOH A 67 140 140 HOH HOH . 
F 4 HOH A 68 141 141 HOH HOH . 
F 4 HOH A 69 142 142 HOH HOH . 
F 4 HOH A 70 146 146 HOH HOH . 
F 4 HOH A 71 148 148 HOH HOH . 
F 4 HOH A 72 154 154 HOH HOH . 
F 4 HOH A 73 158 158 HOH HOH . 
F 4 HOH A 74 159 159 HOH HOH . 
F 4 HOH A 75 161 161 HOH HOH . 
F 4 HOH A 76 163 163 HOH HOH . 
F 4 HOH A 77 169 169 HOH HOH . 
F 4 HOH A 78 170 170 HOH HOH . 
F 4 HOH A 79 171 171 HOH HOH . 
F 4 HOH A 80 174 174 HOH HOH . 
F 4 HOH A 81 177 177 HOH HOH . 
F 4 HOH A 82 181 181 HOH HOH . 
F 4 HOH A 83 183 183 HOH HOH . 
F 4 HOH A 84 185 185 HOH HOH . 
F 4 HOH A 85 186 186 HOH HOH . 
G 4 HOH B 1 68 16 HOH HOH . 
G 4 HOH B 2 69 17 HOH HOH . 
G 4 HOH B 3 70 23 HOH HOH . 
G 4 HOH B 4 71 25 HOH HOH . 
G 4 HOH B 5 72 30 HOH HOH . 
G 4 HOH B 6 73 31 HOH HOH . 
G 4 HOH B 7 74 32 HOH HOH . 
G 4 HOH B 8 75 33 HOH HOH . 
G 4 HOH B 9 76 34 HOH HOH . 
G 4 HOH B 10 77 77 HOH HOH . 
G 4 HOH B 11 78 36 HOH HOH . 
G 4 HOH B 12 79 37 HOH HOH . 
G 4 HOH B 13 80 38 HOH HOH . 
G 4 HOH B 14 81 41 HOH HOH . 
G 4 HOH B 15 82 42 HOH HOH . 
G 4 HOH B 16 83 43 HOH HOH . 
G 4 HOH B 17 84 44 HOH HOH . 
G 4 HOH B 18 85 45 HOH HOH . 
G 4 HOH B 19 86 86 HOH HOH . 
G 4 HOH B 20 87 87 HOH HOH . 
G 4 HOH B 21 88 88 HOH HOH . 
G 4 HOH B 22 89 89 HOH HOH . 
G 4 HOH B 23 90 90 HOH HOH . 
G 4 HOH B 24 91 91 HOH HOH . 
G 4 HOH B 25 92 46 HOH HOH . 
G 4 HOH B 26 93 48 HOH HOH . 
G 4 HOH B 27 94 49 HOH HOH . 
G 4 HOH B 28 95 50 HOH HOH . 
G 4 HOH B 29 96 51 HOH HOH . 
G 4 HOH B 30 97 52 HOH HOH . 
G 4 HOH B 31 98 98 HOH HOH . 
G 4 HOH B 32 99 99 HOH HOH . 
G 4 HOH B 33 100 100 HOH HOH . 
G 4 HOH B 34 101 101 HOH HOH . 
G 4 HOH B 35 102 54 HOH HOH . 
G 4 HOH B 36 103 103 HOH HOH . 
G 4 HOH B 37 104 55 HOH HOH . 
G 4 HOH B 38 105 56 HOH HOH . 
G 4 HOH B 39 106 57 HOH HOH . 
G 4 HOH B 40 107 58 HOH HOH . 
G 4 HOH B 41 108 108 HOH HOH . 
G 4 HOH B 42 109 59 HOH HOH . 
G 4 HOH B 43 110 110 HOH HOH . 
G 4 HOH B 44 111 60 HOH HOH . 
G 4 HOH B 45 112 64 HOH HOH . 
G 4 HOH B 46 113 65 HOH HOH . 
G 4 HOH B 47 114 66 HOH HOH . 
G 4 HOH B 48 115 115 HOH HOH . 
G 4 HOH B 49 116 116 HOH HOH . 
G 4 HOH B 50 117 67 HOH HOH . 
G 4 HOH B 51 118 102 HOH HOH . 
G 4 HOH B 52 123 123 HOH HOH . 
G 4 HOH B 53 126 126 HOH HOH . 
G 4 HOH B 54 127 127 HOH HOH . 
G 4 HOH B 55 128 128 HOH HOH . 
G 4 HOH B 56 129 129 HOH HOH . 
G 4 HOH B 57 131 131 HOH HOH . 
G 4 HOH B 58 133 133 HOH HOH . 
G 4 HOH B 59 135 135 HOH HOH . 
G 4 HOH B 60 136 136 HOH HOH . 
G 4 HOH B 61 137 137 HOH HOH . 
G 4 HOH B 62 138 138 HOH HOH . 
G 4 HOH B 63 139 139 HOH HOH . 
G 4 HOH B 64 143 143 HOH HOH . 
G 4 HOH B 65 144 144 HOH HOH . 
G 4 HOH B 66 145 145 HOH HOH . 
G 4 HOH B 67 147 147 HOH HOH . 
G 4 HOH B 68 150 150 HOH HOH . 
G 4 HOH B 69 151 151 HOH HOH . 
G 4 HOH B 70 152 152 HOH HOH . 
G 4 HOH B 71 153 153 HOH HOH . 
G 4 HOH B 72 156 156 HOH HOH . 
G 4 HOH B 73 157 157 HOH HOH . 
G 4 HOH B 74 160 160 HOH HOH . 
G 4 HOH B 75 162 162 HOH HOH . 
G 4 HOH B 76 164 164 HOH HOH . 
G 4 HOH B 77 165 165 HOH HOH . 
G 4 HOH B 78 166 166 HOH HOH . 
G 4 HOH B 79 168 168 HOH HOH . 
G 4 HOH B 80 172 172 HOH HOH . 
G 4 HOH B 81 173 173 HOH HOH . 
G 4 HOH B 82 176 176 HOH HOH . 
G 4 HOH B 83 178 178 HOH HOH . 
G 4 HOH B 84 179 179 HOH HOH . 
G 4 HOH B 85 182 182 HOH HOH . 
G 4 HOH B 86 184 184 HOH HOH . 
H 4 HOH R 1 35 35 HOH HOH . 
H 4 HOH R 2 53 53 HOH HOH . 
H 4 HOH R 3 149 149 HOH HOH . 
H 4 HOH R 4 155 155 HOH HOH . 
H 4 HOH R 5 167 167 HOH HOH . 
H 4 HOH R 6 180 180 HOH HOH . 
H 4 HOH R 7 187 187 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               20.157 
_atom_site.Cartn_y               42.879 
_atom_site.Cartn_z               14.139 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        28.25 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           68 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#