data_3PF8
#
_model_server_result.job_id            vAU6wq4EqwsuJ-Cw-iimlQ 
_model_server_result.datetime_utc      '2024-11-23 12:35:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3pf8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":250}' 
#
_entry.id    3PF8 
#
_exptl.entry_id    3PF8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3PF8 
_cell.length_a            149.899 
_cell.length_b            149.899 
_cell.length_c            130.309 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3PF8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 D NA NA . B NA 250 1_555 G O HOH . B HOH 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? 
metalc ? metalc2 E NA NA . B NA 251 1_555 G O HOH . B HOH 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3PF8 
_atom_sites.fract_transf_matrix[1][1]    0.006671 
_atom_sites.fract_transf_matrix[1][2]    0.003852 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007703 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007674 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NA A 1 250 2 NA NA . 
D 2 NA B 1 250 1 NA NA . 
E 2 NA B 1 251 3 NA NA . 
F 3 HOH A 1 251 251 HOH HOH . 
F 3 HOH A 2 252 2 HOH HOH . 
F 3 HOH A 3 253 253 HOH HOH . 
F 3 HOH A 4 254 7 HOH HOH . 
F 3 HOH A 5 255 11 HOH HOH . 
F 3 HOH A 6 256 14 HOH HOH . 
F 3 HOH A 7 257 17 HOH HOH . 
F 3 HOH A 8 258 18 HOH HOH . 
F 3 HOH A 9 259 28 HOH HOH . 
F 3 HOH A 10 260 31 HOH HOH . 
F 3 HOH A 11 261 40 HOH HOH . 
F 3 HOH A 12 262 42 HOH HOH . 
F 3 HOH A 13 263 47 HOH HOH . 
F 3 HOH A 14 264 50 HOH HOH . 
F 3 HOH A 15 265 53 HOH HOH . 
F 3 HOH A 16 266 266 HOH HOH . 
F 3 HOH A 17 267 54 HOH HOH . 
F 3 HOH A 18 268 60 HOH HOH . 
F 3 HOH A 19 269 66 HOH HOH . 
F 3 HOH A 20 270 71 HOH HOH . 
F 3 HOH A 21 271 72 HOH HOH . 
F 3 HOH A 22 272 76 HOH HOH . 
F 3 HOH A 23 273 273 HOH HOH . 
F 3 HOH A 24 274 81 HOH HOH . 
F 3 HOH A 25 275 82 HOH HOH . 
F 3 HOH A 26 276 96 HOH HOH . 
F 3 HOH A 27 277 108 HOH HOH . 
F 3 HOH A 28 278 278 HOH HOH . 
F 3 HOH A 29 279 110 HOH HOH . 
F 3 HOH A 30 280 112 HOH HOH . 
F 3 HOH A 31 281 113 HOH HOH . 
F 3 HOH A 32 282 120 HOH HOH . 
F 3 HOH A 33 283 123 HOH HOH . 
F 3 HOH A 34 284 125 HOH HOH . 
F 3 HOH A 35 285 134 HOH HOH . 
F 3 HOH A 36 286 135 HOH HOH . 
F 3 HOH A 37 287 145 HOH HOH . 
F 3 HOH A 38 288 153 HOH HOH . 
F 3 HOH A 39 289 289 HOH HOH . 
F 3 HOH A 40 290 165 HOH HOH . 
F 3 HOH A 41 291 170 HOH HOH . 
F 3 HOH A 42 292 292 HOH HOH . 
F 3 HOH A 43 293 174 HOH HOH . 
F 3 HOH A 44 294 294 HOH HOH . 
F 3 HOH A 45 295 295 HOH HOH . 
F 3 HOH A 46 296 179 HOH HOH . 
F 3 HOH A 47 297 183 HOH HOH . 
F 3 HOH A 48 298 184 HOH HOH . 
F 3 HOH A 49 299 186 HOH HOH . 
F 3 HOH A 50 300 188 HOH HOH . 
F 3 HOH A 51 301 194 HOH HOH . 
F 3 HOH A 52 302 200 HOH HOH . 
F 3 HOH A 53 303 203 HOH HOH . 
F 3 HOH A 54 304 205 HOH HOH . 
F 3 HOH A 55 305 207 HOH HOH . 
F 3 HOH A 56 306 208 HOH HOH . 
F 3 HOH A 57 307 210 HOH HOH . 
F 3 HOH A 58 308 213 HOH HOH . 
F 3 HOH A 59 309 226 HOH HOH . 
F 3 HOH A 60 310 227 HOH HOH . 
F 3 HOH A 61 311 228 HOH HOH . 
F 3 HOH A 62 312 234 HOH HOH . 
F 3 HOH A 63 313 237 HOH HOH . 
F 3 HOH A 64 314 241 HOH HOH . 
F 3 HOH A 65 315 242 HOH HOH . 
F 3 HOH A 66 316 243 HOH HOH . 
F 3 HOH A 67 317 247 HOH HOH . 
F 3 HOH A 68 318 249 HOH HOH . 
G 3 HOH B 1 252 252 HOH HOH . 
G 3 HOH B 2 253 1 HOH HOH . 
G 3 HOH B 3 254 5 HOH HOH . 
G 3 HOH B 4 255 6 HOH HOH . 
G 3 HOH B 5 256 8 HOH HOH . 
G 3 HOH B 6 257 257 HOH HOH . 
G 3 HOH B 7 258 258 HOH HOH . 
G 3 HOH B 8 259 259 HOH HOH . 
G 3 HOH B 9 260 9 HOH HOH . 
G 3 HOH B 10 261 12 HOH HOH . 
G 3 HOH B 11 262 13 HOH HOH . 
G 3 HOH B 12 263 15 HOH HOH . 
G 3 HOH B 13 264 19 HOH HOH . 
G 3 HOH B 14 265 265 HOH HOH . 
G 3 HOH B 15 266 21 HOH HOH . 
G 3 HOH B 16 267 267 HOH HOH . 
G 3 HOH B 17 268 22 HOH HOH . 
G 3 HOH B 18 269 23 HOH HOH . 
G 3 HOH B 19 270 24 HOH HOH . 
G 3 HOH B 20 271 25 HOH HOH . 
G 3 HOH B 21 272 27 HOH HOH . 
G 3 HOH B 22 273 30 HOH HOH . 
G 3 HOH B 23 274 32 HOH HOH . 
G 3 HOH B 24 275 33 HOH HOH . 
G 3 HOH B 25 276 37 HOH HOH . 
G 3 HOH B 26 277 38 HOH HOH . 
G 3 HOH B 27 278 41 HOH HOH . 
G 3 HOH B 28 279 43 HOH HOH . 
G 3 HOH B 29 280 46 HOH HOH . 
G 3 HOH B 30 281 48 HOH HOH . 
G 3 HOH B 31 282 59 HOH HOH . 
G 3 HOH B 32 283 61 HOH HOH . 
G 3 HOH B 33 284 62 HOH HOH . 
G 3 HOH B 34 285 285 HOH HOH . 
G 3 HOH B 35 286 63 HOH HOH . 
G 3 HOH B 36 287 287 HOH HOH . 
G 3 HOH B 37 288 64 HOH HOH . 
G 3 HOH B 38 289 68 HOH HOH . 
G 3 HOH B 39 290 69 HOH HOH . 
G 3 HOH B 40 291 78 HOH HOH . 
G 3 HOH B 41 292 79 HOH HOH . 
G 3 HOH B 42 293 84 HOH HOH . 
G 3 HOH B 43 294 85 HOH HOH . 
G 3 HOH B 44 295 87 HOH HOH . 
G 3 HOH B 45 296 92 HOH HOH . 
G 3 HOH B 46 297 105 HOH HOH . 
G 3 HOH B 47 298 116 HOH HOH . 
G 3 HOH B 48 299 126 HOH HOH . 
G 3 HOH B 49 300 128 HOH HOH . 
G 3 HOH B 50 301 129 HOH HOH . 
G 3 HOH B 51 302 136 HOH HOH . 
G 3 HOH B 52 303 143 HOH HOH . 
G 3 HOH B 53 304 147 HOH HOH . 
G 3 HOH B 54 305 149 HOH HOH . 
G 3 HOH B 55 306 154 HOH HOH . 
G 3 HOH B 56 307 157 HOH HOH . 
G 3 HOH B 57 308 159 HOH HOH . 
G 3 HOH B 58 309 163 HOH HOH . 
G 3 HOH B 59 310 164 HOH HOH . 
G 3 HOH B 60 311 167 HOH HOH . 
G 3 HOH B 61 312 171 HOH HOH . 
G 3 HOH B 62 313 172 HOH HOH . 
G 3 HOH B 63 314 190 HOH HOH . 
G 3 HOH B 64 315 195 HOH HOH . 
G 3 HOH B 65 316 196 HOH HOH . 
G 3 HOH B 66 317 198 HOH HOH . 
G 3 HOH B 67 318 201 HOH HOH . 
G 3 HOH B 68 319 206 HOH HOH . 
G 3 HOH B 69 320 214 HOH HOH . 
G 3 HOH B 70 321 215 HOH HOH . 
G 3 HOH B 71 322 216 HOH HOH . 
G 3 HOH B 72 323 217 HOH HOH . 
G 3 HOH B 73 324 219 HOH HOH . 
G 3 HOH B 74 325 223 HOH HOH . 
G 3 HOH B 75 326 230 HOH HOH . 
G 3 HOH B 76 327 233 HOH HOH . 
G 3 HOH B 77 328 236 HOH HOH . 
G 3 HOH B 78 329 248 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               7.581 
_atom_site.Cartn_y               21.989 
_atom_site.Cartn_z               28.893 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        44.9 
_atom_site.pdbx_formal_charge    1 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           250 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#