data_3PGH # _model_server_result.job_id bOqjzmO_WyXh0fdIr2MeSA _model_server_result.datetime_utc '2024-11-14 09:03:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pgh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":701}' # _entry.id 3PGH # _exptl.entry_id 3PGH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 244.261 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description FLURBIPROFEN _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PGH _cell.length_a 179.5 _cell.length_b 133.8 _cell.length_c 117.1 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PGH _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,J,K,L,M,N 1 1 C,D,O,P,Q,R,S,T,U,V,W,X 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 I N N ? 4 N N N ? 4 S N N ? 4 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 36 1_555 A SG CYS 15 A CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 5 A CYS 37 1_555 A SG CYS 128 A CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 A SG CYS 9 A CYS 41 1_555 A SG CYS 25 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? disulf ? disulf4 A SG CYS 27 A CYS 59 1_555 A SG CYS 37 A CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 A SG CYS 538 A CYS 569 1_555 A SG CYS 544 A CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? disulf ? disulf6 B SG CYS 4 B CYS 36 1_555 B SG CYS 15 B CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? disulf ? disulf7 B SG CYS 5 B CYS 37 1_555 B SG CYS 128 B CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf8 B SG CYS 9 B CYS 41 1_555 B SG CYS 25 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf9 B SG CYS 27 B CYS 59 1_555 B SG CYS 37 B CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf10 B SG CYS 538 B CYS 569 1_555 B SG CYS 544 B CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf11 C SG CYS 4 C CYS 36 1_555 C SG CYS 15 C CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf12 C SG CYS 5 C CYS 37 1_555 C SG CYS 128 C CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? disulf ? disulf13 C SG CYS 9 C CYS 41 1_555 C SG CYS 25 C CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? disulf ? disulf14 C SG CYS 27 C CYS 59 1_555 C SG CYS 37 C CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf15 C SG CYS 538 C CYS 569 1_555 C SG CYS 544 C CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf16 D SG CYS 4 D CYS 36 1_555 D SG CYS 15 D CYS 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf17 D SG CYS 5 D CYS 37 1_555 D SG CYS 128 D CYS 159 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf18 D SG CYS 9 D CYS 41 1_555 D SG CYS 25 D CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf19 D SG CYS 27 D CYS 59 1_555 D SG CYS 37 D CYS 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf20 D SG CYS 538 D CYS 569 1_555 D SG CYS 544 D CYS 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? covale ? covale1 A ND2 ASN 36 A ASN 68 1_555 E C1 NAG . A NAG 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? covale ? covale2 A ND2 ASN 113 A ASN 144 1_555 F C1 NAG . A NAG 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale3 A ND2 ASN 379 A ASN 410 1_555 G C1 NAG . A NAG 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale4 B ND2 ASN 36 B ASN 68 1_555 J C1 NAG . B NAG 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale5 B ND2 ASN 113 B ASN 144 1_555 K C1 NAG . B NAG 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale6 B ND2 ASN 379 B ASN 410 1_555 L C1 NAG . B NAG 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? covale ? covale7 C ND2 ASN 36 C ASN 68 1_555 O C1 NAG . C NAG 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale8 C ND2 ASN 113 C ASN 144 1_555 P C1 NAG . C NAG 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.467 ? covale ? covale9 C ND2 ASN 379 C ASN 410 1_555 Q C1 NAG . C NAG 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? covale ? covale10 D ND2 ASN 36 D ASN 68 1_555 T C1 NAG . D NAG 661 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.474 ? covale ? covale11 D ND2 ASN 113 D ASN 144 1_555 U C1 NAG . D NAG 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale12 D ND2 ASN 379 D ASN 410 1_555 V C1 NAG . D NAG 681 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? metalc ? metalc1 A NE2 HIS 357 A HIS 388 1_555 H FE HEM . A HEM 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc2 B NE2 HIS 357 B HIS 388 1_555 M FE HEM . B HEM 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc3 C NE2 HIS 357 C HIS 388 1_555 R FE HEM . C HEM 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc4 D NE2 HIS 357 D HIS 388 1_555 W FE HEM . D HEM 682 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? # _chem_comp.formula 'C15 H13 F O2' _chem_comp.formula_weight 244.261 _chem_comp.id FLP _chem_comp.mon_nstd_flag . _chem_comp.name FLURBIPROFEN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3PGH _atom_sites.fract_transf_matrix[1][1] 0.005571 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007474 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00854 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAG A 1 661 661 NAG NAG . F 2 NAG A 1 671 671 NAG NAG . G 2 NAG A 1 681 681 NAG NAG . H 3 HEM A 1 682 601 HEM HEM . I 4 FLP A 1 701 701 FLP FLP . J 2 NAG B 1 661 661 NAG NAG . K 2 NAG B 1 671 671 NAG NAG . L 2 NAG B 1 681 681 NAG NAG . M 3 HEM B 1 682 601 HEM HEM . N 4 FLP B 1 701 701 FLP FLP . O 2 NAG C 1 661 661 NAG NAG . P 2 NAG C 1 671 671 NAG NAG . Q 2 NAG C 1 681 681 NAG NAG . R 3 HEM C 1 682 601 HEM HEM . S 4 FLP C 1 701 701 FLP FLP . T 2 NAG D 1 661 661 NAG NAG . U 2 NAG D 1 671 671 NAG NAG . V 2 NAG D 1 681 681 NAG NAG . W 3 HEM D 1 682 601 HEM HEM . X 4 FLP D 1 701 701 FLP FLP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FLP . . . S 4 58.487 40.766 69.543 1 8.41 ? C FLP 701 C 1 HETATM 2 C C1 FLP . . . S 4 58.264 41.429 70.762 1 10.24 ? C1 FLP 701 C 1 HETATM 3 C C2 FLP . . . S 4 58.736 42.724 70.935 1 13.51 ? C2 FLP 701 C 1 HETATM 4 C C3 FLP . . . S 4 59.435 43.351 69.885 1 14.14 ? C3 FLP 701 C 1 HETATM 5 C C4 FLP . . . S 4 59.661 42.696 68.67 1 10.76 ? C4 FLP 701 C 1 HETATM 6 C C5 FLP . . . S 4 59.191 41.409 68.494 1 12.97 ? C5 FLP 701 C 1 HETATM 7 C C6 FLP . . . S 4 58.511 43.455 72.233 1 20.18 ? C6 FLP 701 C 1 HETATM 8 C C7 FLP . . . S 4 57.281 43.387 72.924 1 22.43 ? C7 FLP 701 C 1 HETATM 9 C C8 FLP . . . S 4 57.132 44.092 74.162 1 20.96 ? C8 FLP 701 C 1 HETATM 10 C C9 FLP . . . S 4 58.208 44.837 74.673 1 22.14 ? C9 FLP 701 C 1 HETATM 11 C C10 FLP . . . S 4 59.403 44.887 73.978 1 22.5 ? C10 FLP 701 C 1 HETATM 12 C C11 FLP . . . S 4 59.553 44.208 72.765 1 22.22 ? C11 FLP 701 C 1 HETATM 13 C C12 FLP . . . S 4 58.086 45.639 75.959 1 27.65 ? C12 FLP 701 C 1 HETATM 14 C C13 FLP . . . S 4 56.996 45.061 76.862 1 28.97 ? C13 FLP 701 C 1 HETATM 15 C C14 FLP . . . S 4 57.748 47.074 75.604 1 28.71 ? C14 FLP 701 C 1 HETATM 16 O O FLP . . . S 4 56.665 47.338 75.122 1 30.36 ? O FLP 701 C 1 HETATM 17 O O1 FLP . . . S 4 58.643 48.037 75.795 1 29.53 ? O1 FLP 701 C 1 HETATM 18 F F FLP . . . S 4 60.706 44.305 72.077 1 25.08 ? F FLP 701 C 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 62 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 18 #