data_3PGL
#
_model_server_result.job_id            28Kgm3ctrVbt4xCe40BNUQ 
_model_server_result.datetime_utc      '2024-11-14 16:52:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3pgl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1}' 
#
_entry.id    3PGL 
#
_exptl.entry_id    3PGL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.93 
_cell.angle_gamma         90 
_cell.entry_id            3PGL 
_cell.length_a            125.525 
_cell.length_b            78.26 
_cell.length_c            62.682 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3PGL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,F 1 1 
B,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 C MG MG . A MG 1 1_555 F O HOH . A HOH 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.876 ? 
metalc ? metalc2 C MG MG . A MG 1 1_555 F O HOH . A HOH 32 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? 
metalc ? metalc3 C MG MG . A MG 1 1_555 A OD2 ASP 20 A ASP 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.985 ? 
metalc ? metalc4 C MG MG . A MG 1 1_555 A O ASP 22 A ASP 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? 
metalc ? metalc5 C MG MG . A MG 1 1_555 A OD1 ASN 131 A ASN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? 
metalc ? metalc6 C MG MG . A MG 1 1_555 F O HOH . A HOH 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.887 ? 
metalc ? metalc7 E MG MG . B MG 1 1_555 G O HOH . B HOH 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? 
metalc ? metalc8 E MG MG . B MG 1 1_555 G O HOH . B HOH 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? 
metalc ? metalc9 E MG MG . B MG 1 1_555 B OD2 ASP 20 B ASP 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc10 E MG MG . B MG 1 1_555 B O ASP 22 B ASP 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? 
metalc ? metalc11 E MG MG . B MG 1 1_555 B OD1 ASN 131 B ASN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3PGL 
_atom_sites.fract_transf_matrix[1][1]    0.007967 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003207 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012778 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017198 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 1 1 MG MG . 
D 3 RZX A 1 257 1 RZX RZX . 
E 2 MG B 1 1 1 MG MG . 
F 4 HOH A 1 2 2 HOH HOH . 
F 4 HOH A 2 3 3 HOH HOH . 
F 4 HOH A 3 7 7 HOH HOH . 
F 4 HOH A 4 8 8 HOH HOH . 
F 4 HOH A 5 9 9 HOH HOH . 
F 4 HOH A 6 12 12 HOH HOH . 
F 4 HOH A 7 13 13 HOH HOH . 
F 4 HOH A 8 14 14 HOH HOH . 
F 4 HOH A 9 16 16 HOH HOH . 
F 4 HOH A 10 17 17 HOH HOH . 
F 4 HOH A 11 19 19 HOH HOH . 
F 4 HOH A 12 20 20 HOH HOH . 
F 4 HOH A 13 21 21 HOH HOH . 
F 4 HOH A 14 22 22 HOH HOH . 
F 4 HOH A 15 23 23 HOH HOH . 
F 4 HOH A 16 24 24 HOH HOH . 
F 4 HOH A 17 26 26 HOH HOH . 
F 4 HOH A 18 29 29 HOH HOH . 
F 4 HOH A 19 30 30 HOH HOH . 
F 4 HOH A 20 31 31 HOH HOH . 
F 4 HOH A 21 32 32 HOH HOH . 
F 4 HOH A 22 34 34 HOH HOH . 
F 4 HOH A 23 35 35 HOH HOH . 
F 4 HOH A 24 36 36 HOH HOH . 
F 4 HOH A 25 37 37 HOH HOH . 
F 4 HOH A 26 39 39 HOH HOH . 
F 4 HOH A 27 40 40 HOH HOH . 
F 4 HOH A 28 41 41 HOH HOH . 
F 4 HOH A 29 43 43 HOH HOH . 
F 4 HOH A 30 44 44 HOH HOH . 
F 4 HOH A 31 45 45 HOH HOH . 
F 4 HOH A 32 46 46 HOH HOH . 
F 4 HOH A 33 47 47 HOH HOH . 
F 4 HOH A 34 48 48 HOH HOH . 
F 4 HOH A 35 51 51 HOH HOH . 
F 4 HOH A 36 52 52 HOH HOH . 
F 4 HOH A 37 53 53 HOH HOH . 
F 4 HOH A 38 55 55 HOH HOH . 
F 4 HOH A 39 60 60 HOH HOH . 
F 4 HOH A 40 61 61 HOH HOH . 
F 4 HOH A 41 63 63 HOH HOH . 
F 4 HOH A 42 64 64 HOH HOH . 
F 4 HOH A 43 65 65 HOH HOH . 
F 4 HOH A 44 74 74 HOH HOH . 
F 4 HOH A 45 258 1 HOH HOH . 
F 4 HOH A 46 259 1 HOH HOH . 
F 4 HOH A 47 260 2 HOH HOH . 
F 4 HOH A 48 261 77 HOH HOH . 
F 4 HOH A 49 262 78 HOH HOH . 
F 4 HOH A 50 263 80 HOH HOH . 
F 4 HOH A 51 264 85 HOH HOH . 
F 4 HOH A 52 265 88 HOH HOH . 
F 4 HOH A 53 266 90 HOH HOH . 
F 4 HOH A 54 267 91 HOH HOH . 
F 4 HOH A 55 268 92 HOH HOH . 
F 4 HOH A 56 269 93 HOH HOH . 
F 4 HOH A 57 270 94 HOH HOH . 
F 4 HOH A 58 271 95 HOH HOH . 
F 4 HOH A 59 272 96 HOH HOH . 
F 4 HOH A 60 273 97 HOH HOH . 
F 4 HOH A 61 274 98 HOH HOH . 
F 4 HOH A 62 275 100 HOH HOH . 
F 4 HOH A 63 276 101 HOH HOH . 
F 4 HOH A 64 277 104 HOH HOH . 
F 4 HOH A 65 278 107 HOH HOH . 
F 4 HOH A 66 279 109 HOH HOH . 
G 4 HOH B 1 2 2 HOH HOH . 
G 4 HOH B 2 4 4 HOH HOH . 
G 4 HOH B 3 5 5 HOH HOH . 
G 4 HOH B 4 6 6 HOH HOH . 
G 4 HOH B 5 10 10 HOH HOH . 
G 4 HOH B 6 11 11 HOH HOH . 
G 4 HOH B 7 15 15 HOH HOH . 
G 4 HOH B 8 18 18 HOH HOH . 
G 4 HOH B 9 25 25 HOH HOH . 
G 4 HOH B 10 27 27 HOH HOH . 
G 4 HOH B 11 28 28 HOH HOH . 
G 4 HOH B 12 33 33 HOH HOH . 
G 4 HOH B 13 38 38 HOH HOH . 
G 4 HOH B 14 42 42 HOH HOH . 
G 4 HOH B 15 49 49 HOH HOH . 
G 4 HOH B 16 50 50 HOH HOH . 
G 4 HOH B 17 54 54 HOH HOH . 
G 4 HOH B 18 56 56 HOH HOH . 
G 4 HOH B 19 57 57 HOH HOH . 
G 4 HOH B 20 58 58 HOH HOH . 
G 4 HOH B 21 59 59 HOH HOH . 
G 4 HOH B 22 62 62 HOH HOH . 
G 4 HOH B 23 66 66 HOH HOH . 
G 4 HOH B 24 67 67 HOH HOH . 
G 4 HOH B 25 68 68 HOH HOH . 
G 4 HOH B 26 69 69 HOH HOH . 
G 4 HOH B 27 71 71 HOH HOH . 
G 4 HOH B 28 72 72 HOH HOH . 
G 4 HOH B 29 73 73 HOH HOH . 
G 4 HOH B 30 75 75 HOH HOH . 
G 4 HOH B 31 76 76 HOH HOH . 
G 4 HOH B 32 257 1 HOH HOH . 
G 4 HOH B 33 258 79 HOH HOH . 
G 4 HOH B 34 259 81 HOH HOH . 
G 4 HOH B 35 260 82 HOH HOH . 
G 4 HOH B 36 261 83 HOH HOH . 
G 4 HOH B 37 262 84 HOH HOH . 
G 4 HOH B 38 263 86 HOH HOH . 
G 4 HOH B 39 264 87 HOH HOH . 
G 4 HOH B 40 265 89 HOH HOH . 
G 4 HOH B 41 266 99 HOH HOH . 
G 4 HOH B 42 267 102 HOH HOH . 
G 4 HOH B 43 268 103 HOH HOH . 
G 4 HOH B 44 269 105 HOH HOH . 
G 4 HOH B 45 270 106 HOH HOH . 
G 4 HOH B 46 271 108 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               9.534 
_atom_site.Cartn_y               18.115 
_atom_site.Cartn_z               -6.739 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        25.42 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           1 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           338 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#