data_3PGP
#
_model_server_result.job_id            ArXIIlUWPwXFjVjSspV_Pw 
_model_server_result.datetime_utc      '2024-10-18 21:30:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3pgp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":163}' 
#
_entry.id    3PGP 
#
_exptl.entry_id    3PGP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3PGP 
_cell.length_a            57.673 
_cell.length_b            76.286 
_cell.length_c            39.311 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3PGP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K 1 1 
A,B,C,D,E,F,G,H,I,J,K 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 174 n n 
C1 C2 EDO sing 175 n n 
C1 H11 EDO sing 176 n n 
C1 H12 EDO sing 177 n n 
O1 HO1 EDO sing 178 n n 
C2 O2 EDO sing 179 n n 
C2 H21 EDO sing 180 n n 
C2 H22 EDO sing 181 n n 
O2 HO2 EDO sing 182 n n 
#
_atom_sites.entry_id                     3PGP 
_atom_sites.fract_transf_matrix[1][1]    0.017339 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013109 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025438 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 161 1 EDO EDO . 
C 3 ACO A 1 1423 1423 ACO ACO . 
D 2 EDO A 1 162 1 EDO EDO . 
E 2 EDO A 1 163 1 EDO EDO . 
F 2 EDO A 1 164 1 EDO EDO . 
G 2 EDO A 1 165 1 EDO EDO . 
H 2 EDO A 1 166 1 EDO EDO . 
I 2 EDO A 1 167 1 EDO EDO . 
J 4 CL A 1 168 1 CL CL . 
K 5 HOH A 1 169 169 HOH HOH . 
K 5 HOH A 2 170 2 HOH HOH . 
K 5 HOH A 3 171 171 HOH HOH . 
K 5 HOH A 4 172 3 HOH HOH . 
K 5 HOH A 5 173 173 HOH HOH . 
K 5 HOH A 6 174 174 HOH HOH . 
K 5 HOH A 7 175 175 HOH HOH . 
K 5 HOH A 8 176 5 HOH HOH . 
K 5 HOH A 9 177 6 HOH HOH . 
K 5 HOH A 10 178 7 HOH HOH . 
K 5 HOH A 11 179 8 HOH HOH . 
K 5 HOH A 12 180 180 HOH HOH . 
K 5 HOH A 13 181 181 HOH HOH . 
K 5 HOH A 14 182 9 HOH HOH . 
K 5 HOH A 15 183 183 HOH HOH . 
K 5 HOH A 16 184 10 HOH HOH . 
K 5 HOH A 17 185 11 HOH HOH . 
K 5 HOH A 18 186 12 HOH HOH . 
K 5 HOH A 19 187 187 HOH HOH . 
K 5 HOH A 20 188 13 HOH HOH . 
K 5 HOH A 21 189 189 HOH HOH . 
K 5 HOH A 22 190 190 HOH HOH . 
K 5 HOH A 23 191 14 HOH HOH . 
K 5 HOH A 24 192 15 HOH HOH . 
K 5 HOH A 25 193 16 HOH HOH . 
K 5 HOH A 26 194 17 HOH HOH . 
K 5 HOH A 27 195 195 HOH HOH . 
K 5 HOH A 28 196 196 HOH HOH . 
K 5 HOH A 29 197 18 HOH HOH . 
K 5 HOH A 30 198 198 HOH HOH . 
K 5 HOH A 31 199 199 HOH HOH . 
K 5 HOH A 32 200 200 HOH HOH . 
K 5 HOH A 33 201 201 HOH HOH . 
K 5 HOH A 34 202 19 HOH HOH . 
K 5 HOH A 35 203 203 HOH HOH . 
K 5 HOH A 36 204 204 HOH HOH . 
K 5 HOH A 37 205 205 HOH HOH . 
K 5 HOH A 38 206 20 HOH HOH . 
K 5 HOH A 39 207 21 HOH HOH . 
K 5 HOH A 40 208 22 HOH HOH . 
K 5 HOH A 41 209 24 HOH HOH . 
K 5 HOH A 42 210 25 HOH HOH . 
K 5 HOH A 43 211 26 HOH HOH . 
K 5 HOH A 44 212 27 HOH HOH . 
K 5 HOH A 45 213 28 HOH HOH . 
K 5 HOH A 46 214 29 HOH HOH . 
K 5 HOH A 47 215 30 HOH HOH . 
K 5 HOH A 48 216 31 HOH HOH . 
K 5 HOH A 49 217 32 HOH HOH . 
K 5 HOH A 50 218 33 HOH HOH . 
K 5 HOH A 51 219 34 HOH HOH . 
K 5 HOH A 52 220 35 HOH HOH . 
K 5 HOH A 53 221 36 HOH HOH . 
K 5 HOH A 54 222 38 HOH HOH . 
K 5 HOH A 55 223 39 HOH HOH . 
K 5 HOH A 56 224 40 HOH HOH . 
K 5 HOH A 57 225 41 HOH HOH . 
K 5 HOH A 58 226 42 HOH HOH . 
K 5 HOH A 59 227 43 HOH HOH . 
K 5 HOH A 60 228 44 HOH HOH . 
K 5 HOH A 61 229 45 HOH HOH . 
K 5 HOH A 62 230 46 HOH HOH . 
K 5 HOH A 63 231 47 HOH HOH . 
K 5 HOH A 64 232 48 HOH HOH . 
K 5 HOH A 65 233 49 HOH HOH . 
K 5 HOH A 66 234 51 HOH HOH . 
K 5 HOH A 67 235 53 HOH HOH . 
K 5 HOH A 68 236 54 HOH HOH . 
K 5 HOH A 69 237 55 HOH HOH . 
K 5 HOH A 70 238 56 HOH HOH . 
K 5 HOH A 71 239 57 HOH HOH . 
K 5 HOH A 72 240 58 HOH HOH . 
K 5 HOH A 73 241 60 HOH HOH . 
K 5 HOH A 74 242 61 HOH HOH . 
K 5 HOH A 75 243 62 HOH HOH . 
K 5 HOH A 76 244 63 HOH HOH . 
K 5 HOH A 77 245 64 HOH HOH . 
K 5 HOH A 78 246 65 HOH HOH . 
K 5 HOH A 79 247 66 HOH HOH . 
K 5 HOH A 80 248 67 HOH HOH . 
K 5 HOH A 81 249 68 HOH HOH . 
K 5 HOH A 82 250 69 HOH HOH . 
K 5 HOH A 83 251 70 HOH HOH . 
K 5 HOH A 84 252 71 HOH HOH . 
K 5 HOH A 85 253 72 HOH HOH . 
K 5 HOH A 86 254 73 HOH HOH . 
K 5 HOH A 87 255 76 HOH HOH . 
K 5 HOH A 88 256 77 HOH HOH . 
K 5 HOH A 89 257 78 HOH HOH . 
K 5 HOH A 90 258 79 HOH HOH . 
K 5 HOH A 91 259 80 HOH HOH . 
K 5 HOH A 92 260 81 HOH HOH . 
K 5 HOH A 93 261 82 HOH HOH . 
K 5 HOH A 94 262 83 HOH HOH . 
K 5 HOH A 95 263 84 HOH HOH . 
K 5 HOH A 96 264 85 HOH HOH . 
K 5 HOH A 97 265 86 HOH HOH . 
K 5 HOH A 98 266 87 HOH HOH . 
K 5 HOH A 99 267 88 HOH HOH . 
K 5 HOH A 100 268 89 HOH HOH . 
K 5 HOH A 101 269 90 HOH HOH . 
K 5 HOH A 102 270 92 HOH HOH . 
K 5 HOH A 103 271 93 HOH HOH . 
K 5 HOH A 104 272 94 HOH HOH . 
K 5 HOH A 105 273 96 HOH HOH . 
K 5 HOH A 106 274 100 HOH HOH . 
K 5 HOH A 107 275 101 HOH HOH . 
K 5 HOH A 108 276 102 HOH HOH . 
K 5 HOH A 109 277 103 HOH HOH . 
K 5 HOH A 110 278 104 HOH HOH . 
K 5 HOH A 111 279 106 HOH HOH . 
K 5 HOH A 112 280 107 HOH HOH . 
K 5 HOH A 113 281 108 HOH HOH . 
K 5 HOH A 114 282 109 HOH HOH . 
K 5 HOH A 115 283 110 HOH HOH . 
K 5 HOH A 116 284 111 HOH HOH . 
K 5 HOH A 117 285 112 HOH HOH . 
K 5 HOH A 118 286 113 HOH HOH . 
K 5 HOH A 119 287 114 HOH HOH . 
K 5 HOH A 120 288 115 HOH HOH . 
K 5 HOH A 121 289 116 HOH HOH . 
K 5 HOH A 122 290 117 HOH HOH . 
K 5 HOH A 123 291 118 HOH HOH . 
K 5 HOH A 124 292 119 HOH HOH . 
K 5 HOH A 125 293 120 HOH HOH . 
K 5 HOH A 126 294 121 HOH HOH . 
K 5 HOH A 127 295 124 HOH HOH . 
K 5 HOH A 128 296 126 HOH HOH . 
K 5 HOH A 129 297 127 HOH HOH . 
K 5 HOH A 130 298 130 HOH HOH . 
K 5 HOH A 131 299 131 HOH HOH . 
K 5 HOH A 132 300 133 HOH HOH . 
K 5 HOH A 133 301 134 HOH HOH . 
K 5 HOH A 134 302 135 HOH HOH . 
K 5 HOH A 135 303 136 HOH HOH . 
K 5 HOH A 136 304 137 HOH HOH . 
K 5 HOH A 137 305 138 HOH HOH . 
K 5 HOH A 138 306 139 HOH HOH . 
K 5 HOH A 139 307 142 HOH HOH . 
K 5 HOH A 140 308 144 HOH HOH . 
K 5 HOH A 141 309 145 HOH HOH . 
K 5 HOH A 142 310 147 HOH HOH . 
K 5 HOH A 143 311 148 HOH HOH . 
K 5 HOH A 144 312 149 HOH HOH . 
K 5 HOH A 145 313 150 HOH HOH . 
K 5 HOH A 146 314 151 HOH HOH . 
K 5 HOH A 147 315 152 HOH HOH . 
K 5 HOH A 148 316 153 HOH HOH . 
K 5 HOH A 149 317 159 HOH HOH . 
K 5 HOH A 150 318 160 HOH HOH . 
K 5 HOH A 151 319 161 HOH HOH . 
K 5 HOH A 152 320 162 HOH HOH . 
K 5 HOH A 153 321 163 HOH HOH . 
K 5 HOH A 154 322 164 HOH HOH . 
K 5 HOH A 155 323 165 HOH HOH . 
K 5 HOH A 156 324 167 HOH HOH . 
K 5 HOH A 157 325 168 HOH HOH . 
K 5 HOH A 158 326 1 HOH HOH . 
K 5 HOH A 159 327 3 HOH HOH . 
K 5 HOH A 160 328 4 HOH HOH . 
K 5 HOH A 161 329 5 HOH HOH . 
K 5 HOH A 162 330 6 HOH HOH . 
K 5 HOH A 163 331 7 HOH HOH . 
K 5 HOH A 164 332 8 HOH HOH . 
K 5 HOH A 165 333 1 HOH HOH . 
K 5 HOH A 166 334 2 HOH HOH . 
K 5 HOH A 167 335 3 HOH HOH . 
K 5 HOH A 168 336 4 HOH HOH . 
K 5 HOH A 169 337 5 HOH HOH . 
K 5 HOH A 170 338 6 HOH HOH . 
K 5 HOH A 171 339 7 HOH HOH . 
K 5 HOH A 172 340 8 HOH HOH . 
K 5 HOH A 173 341 9 HOH HOH . 
K 5 HOH A 174 342 1 HOH HOH . 
K 5 HOH A 175 343 2 HOH HOH . 
K 5 HOH A 176 344 3 HOH HOH . 
K 5 HOH A 177 345 4 HOH HOH . 
K 5 HOH A 178 346 6 HOH HOH . 
K 5 HOH A 179 347 7 HOH HOH . 
K 5 HOH A 180 348 8 HOH HOH . 
K 5 HOH A 181 349 9 HOH HOH . 
K 5 HOH A 182 350 1 HOH HOH . 
K 5 HOH A 183 351 2 HOH HOH . 
K 5 HOH A 184 352 3 HOH HOH . 
K 5 HOH A 185 353 1 HOH HOH . 
K 5 HOH A 186 354 1 HOH HOH . 
K 5 HOH A 187 355 2 HOH HOH . 
K 5 HOH A 188 356 3 HOH HOH . 
K 5 HOH A 189 357 2 HOH HOH . 
K 5 HOH A 190 358 3 HOH HOH . 
K 5 HOH A 191 359 4 HOH HOH . 
K 5 HOH A 192 360 1 HOH HOH . 
K 5 HOH A 193 361 2 HOH HOH . 
K 5 HOH A 194 362 3 HOH HOH . 
K 5 HOH A 195 363 4 HOH HOH . 
K 5 HOH A 196 364 6 HOH HOH . 
K 5 HOH A 197 365 7 HOH HOH . 
K 5 HOH A 198 366 8 HOH HOH . 
K 5 HOH A 199 367 9 HOH HOH . 
K 5 HOH A 200 368 10 HOH HOH . 
K 5 HOH A 201 369 11 HOH HOH . 
K 5 HOH A 202 370 12 HOH HOH . 
K 5 HOH A 203 371 13 HOH HOH . 
K 5 HOH A 204 372 2 HOH HOH . 
K 5 HOH A 205 373 3 HOH HOH . 
K 5 HOH A 206 374 4 HOH HOH . 
K 5 HOH A 207 375 1 HOH HOH . 
K 5 HOH A 208 376 2 HOH HOH . 
K 5 HOH A 209 377 1 HOH HOH . 
K 5 HOH A 210 378 2 HOH HOH . 
K 5 HOH A 211 379 3 HOH HOH . 
K 5 HOH A 212 380 4 HOH HOH . 
K 5 HOH A 213 381 5 HOH HOH . 
K 5 HOH A 214 382 6 HOH HOH . 
K 5 HOH A 215 383 1 HOH HOH . 
K 5 HOH A 216 384 1 HOH HOH . 
K 5 HOH A 217 385 1 HOH HOH . 
K 5 HOH A 218 386 2 HOH HOH . 
K 5 HOH A 219 387 1 HOH HOH . 
K 5 HOH A 220 388 3 HOH HOH . 
K 5 HOH A 221 389 2 HOH HOH . 
K 5 HOH A 222 390 1 HOH HOH . 
K 5 HOH A 223 391 2 HOH HOH . 
K 5 HOH A 224 392 3 HOH HOH . 
K 5 HOH A 225 393 4 HOH HOH . 
K 5 HOH A 226 394 5 HOH HOH . 
K 5 HOH A 227 395 6 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 2 -8.767 0.292 -21.613 1 32.19 ? C1 EDO 163 A 1 
HETATM 2 O O1 EDO . . . E 2 -9.292 0.762 -22.852 1 33.66 ? O1 EDO 163 A 1 
HETATM 3 C C2 EDO . . . E 2 -7.907 -0.926 -21.873 1 32.33 ? C2 EDO 163 A 1 
HETATM 4 O O2 EDO . . . E 2 -7.388 -1.323 -20.603 1 33.44 ? O2 EDO 163 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           4 
#