data_3PJD # _model_server_result.job_id CtcZAT4uYjKhbg3cMKL2sg _model_server_result.datetime_utc '2024-12-04 07:13:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pjd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":801}' # _entry.id 3PJD # _exptl.entry_id 3PJD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 289.542 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TRICLOSAN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3PJD _cell.length_a 80.826 _cell.length_b 80.826 _cell.length_c 328.404 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PJD _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C12 H7 Cl3 O2' _chem_comp.formula_weight 289.542 _chem_comp.id TCL _chem_comp.mon_nstd_flag . _chem_comp.name TRICLOSAN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 TCL doub 365 n y C1 C6 TCL sing 366 n y C1 H11 TCL sing 367 n n C2 C3 TCL sing 368 n y C2 CL14 TCL sing 369 n n C6 C5 TCL doub 370 n y C6 O17 TCL sing 371 n n C5 C4 TCL sing 372 n y C5 O7 TCL sing 373 n n C4 C3 TCL doub 374 n y C4 H41 TCL sing 375 n n C3 H31 TCL sing 376 n n C11 C10 TCL doub 377 n y C11 C12 TCL sing 378 n y C11 CL15 TCL sing 379 n n C10 C9 TCL sing 380 n y C10 H101 TCL sing 381 n n C9 C8 TCL doub 382 n y C9 CL16 TCL sing 383 n n C8 C13 TCL sing 384 n y C8 O7 TCL sing 385 n n C12 C13 TCL doub 386 n y C12 H121 TCL sing 387 n n C13 H131 TCL sing 388 n n O17 H171 TCL sing 389 n n # _atom_sites.entry_id 3PJD _atom_sites.fract_transf_matrix[1][1] 0.012372 _atom_sites.fract_transf_matrix[1][2] 0.007143 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014286 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003045 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 701 701 NAD NAD . D 3 TCL A 1 801 801 TCL TCL . E 2 NAD B 1 702 702 NAD NAD . F 3 TCL B 1 802 802 TCL TCL . G 4 HOH A 1 802 802 HOH HOH . G 4 HOH A 2 803 803 HOH HOH . G 4 HOH A 3 804 804 HOH HOH . G 4 HOH A 4 805 805 HOH HOH . G 4 HOH A 5 806 806 HOH HOH . G 4 HOH A 6 807 807 HOH HOH . G 4 HOH A 7 808 808 HOH HOH . G 4 HOH A 8 809 809 HOH HOH . G 4 HOH A 9 810 810 HOH HOH . G 4 HOH A 10 811 811 HOH HOH . G 4 HOH A 11 812 812 HOH HOH . G 4 HOH A 12 813 813 HOH HOH . G 4 HOH A 13 814 814 HOH HOH . G 4 HOH A 14 815 815 HOH HOH . G 4 HOH A 15 816 816 HOH HOH . G 4 HOH A 16 817 817 HOH HOH . G 4 HOH A 17 818 818 HOH HOH . G 4 HOH A 18 819 819 HOH HOH . G 4 HOH A 19 820 820 HOH HOH . G 4 HOH A 20 821 821 HOH HOH . G 4 HOH A 21 822 822 HOH HOH . G 4 HOH A 22 823 823 HOH HOH . G 4 HOH A 23 824 824 HOH HOH . G 4 HOH A 24 825 825 HOH HOH . G 4 HOH A 25 826 826 HOH HOH . G 4 HOH A 26 827 827 HOH HOH . G 4 HOH A 27 828 828 HOH HOH . G 4 HOH A 28 829 829 HOH HOH . G 4 HOH A 29 830 830 HOH HOH . G 4 HOH A 30 831 831 HOH HOH . G 4 HOH A 31 832 832 HOH HOH . G 4 HOH A 32 833 833 HOH HOH . G 4 HOH A 33 834 834 HOH HOH . G 4 HOH A 34 835 835 HOH HOH . G 4 HOH A 35 836 836 HOH HOH . G 4 HOH A 36 837 837 HOH HOH . G 4 HOH A 37 838 838 HOH HOH . G 4 HOH A 38 839 839 HOH HOH . G 4 HOH A 39 840 840 HOH HOH . G 4 HOH A 40 841 841 HOH HOH . G 4 HOH A 41 842 842 HOH HOH . G 4 HOH A 42 843 843 HOH HOH . G 4 HOH A 43 844 844 HOH HOH . G 4 HOH A 44 845 845 HOH HOH . H 4 HOH B 1 803 803 HOH HOH . H 4 HOH B 2 804 804 HOH HOH . H 4 HOH B 3 805 805 HOH HOH . H 4 HOH B 4 806 806 HOH HOH . H 4 HOH B 5 807 807 HOH HOH . H 4 HOH B 6 808 808 HOH HOH . H 4 HOH B 7 809 809 HOH HOH . H 4 HOH B 8 810 810 HOH HOH . H 4 HOH B 9 811 811 HOH HOH . H 4 HOH B 10 812 812 HOH HOH . H 4 HOH B 11 813 813 HOH HOH . H 4 HOH B 12 814 814 HOH HOH . H 4 HOH B 13 815 815 HOH HOH . H 4 HOH B 14 816 816 HOH HOH . H 4 HOH B 15 817 817 HOH HOH . H 4 HOH B 16 818 818 HOH HOH . H 4 HOH B 17 819 819 HOH HOH . H 4 HOH B 18 820 820 HOH HOH . H 4 HOH B 19 821 821 HOH HOH . H 4 HOH B 20 822 822 HOH HOH . H 4 HOH B 21 823 823 HOH HOH . H 4 HOH B 22 824 824 HOH HOH . H 4 HOH B 23 825 825 HOH HOH . H 4 HOH B 24 826 826 HOH HOH . H 4 HOH B 25 827 827 HOH HOH . H 4 HOH B 26 828 828 HOH HOH . H 4 HOH B 27 829 829 HOH HOH . H 4 HOH B 28 830 830 HOH HOH . H 4 HOH B 29 831 831 HOH HOH . H 4 HOH B 30 832 832 HOH HOH . H 4 HOH B 31 833 833 HOH HOH . H 4 HOH B 32 834 834 HOH HOH . H 4 HOH B 33 835 835 HOH HOH . H 4 HOH B 34 836 836 HOH HOH . H 4 HOH B 35 837 837 HOH HOH . H 4 HOH B 36 838 838 HOH HOH . H 4 HOH B 37 839 839 HOH HOH . H 4 HOH B 38 840 840 HOH HOH . H 4 HOH B 39 841 841 HOH HOH . H 4 HOH B 40 842 842 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TCL . . . D 3 2.534 24.628 297.837 1 43.93 ? C1 TCL 801 A 1 HETATM 2 C C2 TCL . . . D 3 2.665 23.961 296.577 1 44.08 ? C2 TCL 801 A 1 HETATM 3 C C6 TCL . . . D 3 2.55 23.818 299.032 1 44.3 ? C6 TCL 801 A 1 HETATM 4 C C5 TCL . . . D 3 2.695 22.408 298.894 1 45.35 ? C5 TCL 801 A 1 HETATM 5 C C4 TCL . . . D 3 2.825 21.774 297.604 1 45.15 ? C4 TCL 801 A 1 HETATM 6 C C3 TCL . . . D 3 2.811 22.554 296.417 1 44.17 ? C3 TCL 801 A 1 HETATM 7 C C11 TCL . . . D 3 -0.671 19.75 301.815 1 49.51 ? C11 TCL 801 A 1 HETATM 8 C C10 TCL . . . D 3 0.654 19.495 302.323 1 48.95 ? C10 TCL 801 A 1 HETATM 9 C C9 TCL . . . D 3 1.767 20.144 301.713 1 48.15 ? C9 TCL 801 A 1 HETATM 10 C C8 TCL . . . D 3 1.571 21.047 300.602 1 47.49 ? C8 TCL 801 A 1 HETATM 11 C C12 TCL . . . D 3 -0.889 20.642 300.712 1 49.76 ? C12 TCL 801 A 1 HETATM 12 C C13 TCL . . . D 3 0.22 21.274 300.122 1 48.54 ? C13 TCL 801 A 1 HETATM 13 O O7 TCL . . . D 3 2.692 21.655 300.043 1 44.91 ? O7 TCL 801 A 1 HETATM 14 CL CL14 TCL . . . D 3 2.641 24.922 295.146 1 45.88 ? CL14 TCL 801 A 1 HETATM 15 CL CL15 TCL . . . D 3 -2.032 18.974 302.538 1 51.18 ? CL15 TCL 801 A 1 HETATM 16 CL CL16 TCL . . . D 3 3.374 19.809 302.356 1 47.31 ? CL16 TCL 801 A 1 HETATM 17 O O17 TCL . . . D 3 2.422 24.403 300.245 1 43.09 ? O17 TCL 801 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 233 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #