data_3PMR # _model_server_result.job_id IQQ2v3YW0rPnyRzUlBrZNg _model_server_result.datetime_utc '2025-03-05 22:02:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pmr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2}' # _entry.id 3PMR # _exptl.entry_id 3PMR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PMR _cell.length_a 74.885 _cell.length_b 81.269 _cell.length_c 89.67 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PMR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 247 n n P O2 PO4 sing 248 n n P O3 PO4 sing 249 n n P O4 PO4 sing 250 n n # _atom_sites.entry_id 3PMR _atom_sites.fract_transf_matrix[1][1] 0.013354 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012305 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011152 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 2 2 PO4 PO4 . D 2 PO4 A 1 3 3 PO4 PO4 . E 2 PO4 B 1 1 1 PO4 PO4 . F 2 PO4 B 1 4 4 PO4 PO4 . G 3 HOH A 1 5 5 HOH HOH . G 3 HOH A 2 8 8 HOH HOH . G 3 HOH A 3 9 9 HOH HOH . G 3 HOH A 4 10 10 HOH HOH . G 3 HOH A 5 11 11 HOH HOH . G 3 HOH A 6 12 12 HOH HOH . G 3 HOH A 7 17 17 HOH HOH . G 3 HOH A 8 18 18 HOH HOH . G 3 HOH A 9 22 22 HOH HOH . G 3 HOH A 10 24 24 HOH HOH . G 3 HOH A 11 28 28 HOH HOH . G 3 HOH A 12 32 32 HOH HOH . G 3 HOH A 13 33 33 HOH HOH . G 3 HOH A 14 34 34 HOH HOH . G 3 HOH A 15 36 36 HOH HOH . G 3 HOH A 16 37 37 HOH HOH . G 3 HOH A 17 39 39 HOH HOH . G 3 HOH A 18 41 41 HOH HOH . G 3 HOH A 19 42 42 HOH HOH . G 3 HOH A 20 43 43 HOH HOH . G 3 HOH A 21 46 46 HOH HOH . G 3 HOH A 22 49 49 HOH HOH . G 3 HOH A 23 50 50 HOH HOH . G 3 HOH A 24 53 53 HOH HOH . G 3 HOH A 25 54 54 HOH HOH . G 3 HOH A 26 55 55 HOH HOH . G 3 HOH A 27 57 57 HOH HOH . G 3 HOH A 28 62 62 HOH HOH . G 3 HOH A 29 65 65 HOH HOH . G 3 HOH A 30 66 66 HOH HOH . G 3 HOH A 31 67 67 HOH HOH . G 3 HOH A 32 69 69 HOH HOH . G 3 HOH A 33 70 70 HOH HOH . G 3 HOH A 34 71 71 HOH HOH . G 3 HOH A 35 73 73 HOH HOH . G 3 HOH A 36 74 74 HOH HOH . G 3 HOH A 37 75 75 HOH HOH . G 3 HOH A 38 80 80 HOH HOH . G 3 HOH A 39 82 82 HOH HOH . G 3 HOH A 40 86 86 HOH HOH . G 3 HOH A 41 88 88 HOH HOH . G 3 HOH A 42 89 89 HOH HOH . G 3 HOH A 43 90 90 HOH HOH . G 3 HOH A 44 92 92 HOH HOH . G 3 HOH A 45 97 97 HOH HOH . G 3 HOH A 46 98 98 HOH HOH . G 3 HOH A 47 100 100 HOH HOH . G 3 HOH A 48 102 102 HOH HOH . G 3 HOH A 49 103 103 HOH HOH . G 3 HOH A 50 105 105 HOH HOH . G 3 HOH A 51 106 106 HOH HOH . G 3 HOH A 52 107 107 HOH HOH . G 3 HOH A 53 110 110 HOH HOH . G 3 HOH A 54 111 111 HOH HOH . G 3 HOH A 55 112 112 HOH HOH . G 3 HOH A 56 115 115 HOH HOH . G 3 HOH A 57 117 117 HOH HOH . G 3 HOH A 58 118 118 HOH HOH . G 3 HOH A 59 122 122 HOH HOH . G 3 HOH A 60 123 123 HOH HOH . G 3 HOH A 61 126 126 HOH HOH . G 3 HOH A 62 127 127 HOH HOH . G 3 HOH A 63 129 129 HOH HOH . G 3 HOH A 64 130 130 HOH HOH . G 3 HOH A 65 132 132 HOH HOH . G 3 HOH A 66 133 133 HOH HOH . G 3 HOH A 67 135 135 HOH HOH . G 3 HOH A 68 136 136 HOH HOH . G 3 HOH A 69 140 140 HOH HOH . G 3 HOH A 70 142 142 HOH HOH . G 3 HOH A 71 144 144 HOH HOH . G 3 HOH A 72 146 146 HOH HOH . G 3 HOH A 73 149 149 HOH HOH . G 3 HOH A 74 156 156 HOH HOH . G 3 HOH A 75 157 157 HOH HOH . G 3 HOH A 76 158 158 HOH HOH . G 3 HOH A 77 161 161 HOH HOH . G 3 HOH A 78 162 162 HOH HOH . G 3 HOH A 79 164 164 HOH HOH . G 3 HOH A 80 166 166 HOH HOH . G 3 HOH A 81 168 168 HOH HOH . G 3 HOH A 82 170 170 HOH HOH . G 3 HOH A 83 171 171 HOH HOH . G 3 HOH A 84 172 172 HOH HOH . G 3 HOH A 85 173 173 HOH HOH . G 3 HOH A 86 174 174 HOH HOH . G 3 HOH A 87 175 175 HOH HOH . G 3 HOH A 88 176 176 HOH HOH . G 3 HOH A 89 177 177 HOH HOH . G 3 HOH A 90 181 181 HOH HOH . G 3 HOH A 91 182 182 HOH HOH . G 3 HOH A 92 183 183 HOH HOH . G 3 HOH A 93 185 185 HOH HOH . G 3 HOH A 94 188 188 HOH HOH . G 3 HOH A 95 189 189 HOH HOH . G 3 HOH A 96 190 190 HOH HOH . G 3 HOH A 97 193 193 HOH HOH . G 3 HOH A 98 195 195 HOH HOH . G 3 HOH A 99 197 197 HOH HOH . G 3 HOH A 100 200 200 HOH HOH . G 3 HOH A 101 203 203 HOH HOH . G 3 HOH A 102 207 207 HOH HOH . G 3 HOH A 103 210 210 HOH HOH . G 3 HOH A 104 211 211 HOH HOH . G 3 HOH A 105 213 213 HOH HOH . G 3 HOH A 106 214 214 HOH HOH . G 3 HOH A 107 215 215 HOH HOH . G 3 HOH A 108 217 217 HOH HOH . G 3 HOH A 109 219 219 HOH HOH . G 3 HOH A 110 223 223 HOH HOH . G 3 HOH A 111 226 226 HOH HOH . G 3 HOH A 112 227 227 HOH HOH . G 3 HOH A 113 230 230 HOH HOH . G 3 HOH A 114 231 231 HOH HOH . G 3 HOH A 115 232 232 HOH HOH . G 3 HOH A 116 233 233 HOH HOH . G 3 HOH A 117 234 234 HOH HOH . G 3 HOH A 118 236 236 HOH HOH . G 3 HOH A 119 238 238 HOH HOH . G 3 HOH A 120 242 242 HOH HOH . G 3 HOH A 121 245 245 HOH HOH . G 3 HOH A 122 246 246 HOH HOH . G 3 HOH A 123 247 247 HOH HOH . G 3 HOH A 124 248 248 HOH HOH . G 3 HOH A 125 250 250 HOH HOH . G 3 HOH A 126 251 251 HOH HOH . G 3 HOH A 127 252 252 HOH HOH . G 3 HOH A 128 254 254 HOH HOH . G 3 HOH A 129 256 256 HOH HOH . G 3 HOH A 130 257 257 HOH HOH . G 3 HOH A 131 259 259 HOH HOH . G 3 HOH A 132 260 260 HOH HOH . G 3 HOH A 133 261 261 HOH HOH . G 3 HOH A 134 262 262 HOH HOH . G 3 HOH A 135 263 263 HOH HOH . G 3 HOH A 136 264 264 HOH HOH . G 3 HOH A 137 266 266 HOH HOH . G 3 HOH A 138 269 269 HOH HOH . G 3 HOH A 139 270 270 HOH HOH . G 3 HOH A 140 271 271 HOH HOH . G 3 HOH A 141 273 273 HOH HOH . G 3 HOH A 142 275 275 HOH HOH . G 3 HOH A 143 562 2 HOH HOH . G 3 HOH A 144 563 3 HOH HOH . H 3 HOH B 1 6 6 HOH HOH . H 3 HOH B 2 7 7 HOH HOH . H 3 HOH B 3 13 13 HOH HOH . H 3 HOH B 4 14 14 HOH HOH . H 3 HOH B 5 15 15 HOH HOH . H 3 HOH B 6 16 16 HOH HOH . H 3 HOH B 7 19 19 HOH HOH . H 3 HOH B 8 20 20 HOH HOH . H 3 HOH B 9 21 21 HOH HOH . H 3 HOH B 10 23 23 HOH HOH . H 3 HOH B 11 25 25 HOH HOH . H 3 HOH B 12 26 26 HOH HOH . H 3 HOH B 13 27 27 HOH HOH . H 3 HOH B 14 29 29 HOH HOH . H 3 HOH B 15 30 30 HOH HOH . H 3 HOH B 16 31 31 HOH HOH . H 3 HOH B 17 35 35 HOH HOH . H 3 HOH B 18 38 38 HOH HOH . H 3 HOH B 19 40 40 HOH HOH . H 3 HOH B 20 44 44 HOH HOH . H 3 HOH B 21 45 45 HOH HOH . H 3 HOH B 22 47 47 HOH HOH . H 3 HOH B 23 48 48 HOH HOH . H 3 HOH B 24 51 51 HOH HOH . H 3 HOH B 25 52 52 HOH HOH . H 3 HOH B 26 56 56 HOH HOH . H 3 HOH B 27 58 58 HOH HOH . H 3 HOH B 28 59 59 HOH HOH . H 3 HOH B 29 60 60 HOH HOH . H 3 HOH B 30 61 61 HOH HOH . H 3 HOH B 31 63 63 HOH HOH . H 3 HOH B 32 64 64 HOH HOH . H 3 HOH B 33 68 68 HOH HOH . H 3 HOH B 34 72 72 HOH HOH . H 3 HOH B 35 76 76 HOH HOH . H 3 HOH B 36 77 77 HOH HOH . H 3 HOH B 37 78 78 HOH HOH . H 3 HOH B 38 79 79 HOH HOH . H 3 HOH B 39 81 81 HOH HOH . H 3 HOH B 40 83 83 HOH HOH . H 3 HOH B 41 84 84 HOH HOH . H 3 HOH B 42 85 85 HOH HOH . H 3 HOH B 43 87 87 HOH HOH . H 3 HOH B 44 91 91 HOH HOH . H 3 HOH B 45 93 93 HOH HOH . H 3 HOH B 46 94 94 HOH HOH . H 3 HOH B 47 95 95 HOH HOH . H 3 HOH B 48 96 96 HOH HOH . H 3 HOH B 49 99 99 HOH HOH . H 3 HOH B 50 101 101 HOH HOH . H 3 HOH B 51 104 104 HOH HOH . H 3 HOH B 52 108 108 HOH HOH . H 3 HOH B 53 109 109 HOH HOH . H 3 HOH B 54 113 113 HOH HOH . H 3 HOH B 55 114 114 HOH HOH . H 3 HOH B 56 116 116 HOH HOH . H 3 HOH B 57 119 119 HOH HOH . H 3 HOH B 58 120 120 HOH HOH . H 3 HOH B 59 121 121 HOH HOH . H 3 HOH B 60 124 124 HOH HOH . H 3 HOH B 61 125 125 HOH HOH . H 3 HOH B 62 128 128 HOH HOH . H 3 HOH B 63 131 131 HOH HOH . H 3 HOH B 64 134 134 HOH HOH . H 3 HOH B 65 137 137 HOH HOH . H 3 HOH B 66 138 138 HOH HOH . H 3 HOH B 67 139 139 HOH HOH . H 3 HOH B 68 141 141 HOH HOH . H 3 HOH B 69 143 143 HOH HOH . H 3 HOH B 70 145 145 HOH HOH . H 3 HOH B 71 147 147 HOH HOH . H 3 HOH B 72 148 148 HOH HOH . H 3 HOH B 73 150 150 HOH HOH . H 3 HOH B 74 151 151 HOH HOH . H 3 HOH B 75 152 152 HOH HOH . H 3 HOH B 76 153 153 HOH HOH . H 3 HOH B 77 154 154 HOH HOH . H 3 HOH B 78 155 155 HOH HOH . H 3 HOH B 79 159 159 HOH HOH . H 3 HOH B 80 160 160 HOH HOH . H 3 HOH B 81 163 163 HOH HOH . H 3 HOH B 82 165 165 HOH HOH . H 3 HOH B 83 167 167 HOH HOH . H 3 HOH B 84 169 169 HOH HOH . H 3 HOH B 85 178 178 HOH HOH . H 3 HOH B 86 179 179 HOH HOH . H 3 HOH B 87 180 180 HOH HOH . H 3 HOH B 88 184 184 HOH HOH . H 3 HOH B 89 186 186 HOH HOH . H 3 HOH B 90 187 187 HOH HOH . H 3 HOH B 91 191 191 HOH HOH . H 3 HOH B 92 192 192 HOH HOH . H 3 HOH B 93 194 194 HOH HOH . H 3 HOH B 94 196 196 HOH HOH . H 3 HOH B 95 198 198 HOH HOH . H 3 HOH B 96 199 199 HOH HOH . H 3 HOH B 97 201 201 HOH HOH . H 3 HOH B 98 202 202 HOH HOH . H 3 HOH B 99 204 204 HOH HOH . H 3 HOH B 100 205 205 HOH HOH . H 3 HOH B 101 206 206 HOH HOH . H 3 HOH B 102 208 208 HOH HOH . H 3 HOH B 103 209 209 HOH HOH . H 3 HOH B 104 212 212 HOH HOH . H 3 HOH B 105 216 216 HOH HOH . H 3 HOH B 106 218 218 HOH HOH . H 3 HOH B 107 220 220 HOH HOH . H 3 HOH B 108 221 221 HOH HOH . H 3 HOH B 109 222 222 HOH HOH . H 3 HOH B 110 224 224 HOH HOH . H 3 HOH B 111 225 225 HOH HOH . H 3 HOH B 112 228 228 HOH HOH . H 3 HOH B 113 229 229 HOH HOH . H 3 HOH B 114 235 235 HOH HOH . H 3 HOH B 115 237 237 HOH HOH . H 3 HOH B 116 239 239 HOH HOH . H 3 HOH B 117 240 240 HOH HOH . H 3 HOH B 118 241 241 HOH HOH . H 3 HOH B 119 243 243 HOH HOH . H 3 HOH B 120 244 244 HOH HOH . H 3 HOH B 121 249 249 HOH HOH . H 3 HOH B 122 253 253 HOH HOH . H 3 HOH B 123 255 255 HOH HOH . H 3 HOH B 124 258 258 HOH HOH . H 3 HOH B 125 265 265 HOH HOH . H 3 HOH B 126 267 267 HOH HOH . H 3 HOH B 127 268 268 HOH HOH . H 3 HOH B 128 272 272 HOH HOH . H 3 HOH B 129 274 274 HOH HOH . H 3 HOH B 130 276 276 HOH HOH . H 3 HOH B 131 277 277 HOH HOH . H 3 HOH B 132 562 1 HOH HOH . H 3 HOH B 133 563 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 2 27.153 -51.234 34.235 1 58.84 ? P PO4 2 A 1 HETATM 2 O O1 PO4 . . . C 2 28.62 -51.112 34.048 1 56.08 ? O1 PO4 2 A 1 HETATM 3 O O2 PO4 . . . C 2 26.47 -51.103 32.92 1 75.47 ? O2 PO4 2 A 1 HETATM 4 O O3 PO4 . . . C 2 26.839 -52.563 34.825 1 60.19 ? O3 PO4 2 A 1 HETATM 5 O O4 PO4 . . . C 2 26.68 -50.161 35.146 1 55.26 ? O4 PO4 2 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #