data_3PMW # _model_server_result.job_id 4mdzrgt6nGhGL1IW6RTxHA _model_server_result.datetime_utc '2024-11-29 02:16:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3pmw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":310}' # _entry.id 3PMW # _exptl.entry_id 3PMW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PMW _cell.length_a 64.787 _cell.length_b 87.328 _cell.length_c 47.549 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PMW _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 K N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 206 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 207 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 261 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 262 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.021 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 190 n n C1 C2 GOL sing 191 n n C1 H11 GOL sing 192 n n C1 H12 GOL sing 193 n n O1 HO1 GOL sing 194 n n C2 O2 GOL sing 195 n n C2 C3 GOL sing 196 n n C2 H2 GOL sing 197 n n O2 HO2 GOL sing 198 n n C3 O3 GOL sing 199 n n C3 H31 GOL sing 200 n n C3 H32 GOL sing 201 n n O3 HO3 GOL sing 202 n n # _atom_sites.entry_id 3PMW _atom_sites.fract_transf_matrix[1][1] 0.015435 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011451 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021031 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLU A 1 301 1 GLU GLU . C 3 SO4 A 1 302 1 SO4 SO4 . D 3 SO4 A 1 303 2 SO4 SO4 . E 3 SO4 A 1 304 3 SO4 SO4 . F 3 SO4 A 1 305 4 SO4 SO4 . G 3 SO4 A 1 306 5 SO4 SO4 . H 3 SO4 A 1 307 6 SO4 SO4 . I 3 SO4 A 1 308 7 SO4 SO4 . J 4 GOL A 1 309 1 GOL GOL . K 4 GOL A 1 310 2 GOL GOL . L 5 DMS A 1 311 1 DMS DMS . M 6 G69 A 1 312 1 G69 G69 . N 7 HOH A 1 401 1 HOH HOH . N 7 HOH A 2 402 2 HOH HOH . N 7 HOH A 3 403 3 HOH HOH . N 7 HOH A 4 404 4 HOH HOH . N 7 HOH A 5 405 5 HOH HOH . N 7 HOH A 6 406 6 HOH HOH . N 7 HOH A 7 407 7 HOH HOH . N 7 HOH A 8 408 8 HOH HOH . N 7 HOH A 9 409 9 HOH HOH . N 7 HOH A 10 410 10 HOH HOH . N 7 HOH A 11 411 11 HOH HOH . N 7 HOH A 12 412 12 HOH HOH . N 7 HOH A 13 413 13 HOH HOH . N 7 HOH A 14 414 14 HOH HOH . N 7 HOH A 15 415 15 HOH HOH . N 7 HOH A 16 416 16 HOH HOH . N 7 HOH A 17 417 17 HOH HOH . N 7 HOH A 18 418 18 HOH HOH . N 7 HOH A 19 419 19 HOH HOH . N 7 HOH A 20 420 20 HOH HOH . N 7 HOH A 21 421 21 HOH HOH . N 7 HOH A 22 422 22 HOH HOH . N 7 HOH A 23 423 23 HOH HOH . N 7 HOH A 24 424 24 HOH HOH . N 7 HOH A 25 425 25 HOH HOH . N 7 HOH A 26 426 26 HOH HOH . N 7 HOH A 27 427 27 HOH HOH . N 7 HOH A 28 428 28 HOH HOH . N 7 HOH A 29 429 29 HOH HOH . N 7 HOH A 30 430 30 HOH HOH . N 7 HOH A 31 431 31 HOH HOH . N 7 HOH A 32 432 32 HOH HOH . N 7 HOH A 33 433 33 HOH HOH . N 7 HOH A 34 434 34 HOH HOH . N 7 HOH A 35 435 35 HOH HOH . N 7 HOH A 36 436 36 HOH HOH . N 7 HOH A 37 437 37 HOH HOH . N 7 HOH A 38 438 38 HOH HOH . N 7 HOH A 39 439 39 HOH HOH . N 7 HOH A 40 440 40 HOH HOH . N 7 HOH A 41 441 41 HOH HOH . N 7 HOH A 42 442 42 HOH HOH . N 7 HOH A 43 443 43 HOH HOH . N 7 HOH A 44 444 44 HOH HOH . N 7 HOH A 45 445 45 HOH HOH . N 7 HOH A 46 446 46 HOH HOH . N 7 HOH A 47 447 47 HOH HOH . N 7 HOH A 48 448 48 HOH HOH . N 7 HOH A 49 449 50 HOH HOH . N 7 HOH A 50 450 51 HOH HOH . N 7 HOH A 51 451 52 HOH HOH . N 7 HOH A 52 452 53 HOH HOH . N 7 HOH A 53 453 54 HOH HOH . N 7 HOH A 54 454 55 HOH HOH . N 7 HOH A 55 455 56 HOH HOH . N 7 HOH A 56 456 57 HOH HOH . N 7 HOH A 57 457 58 HOH HOH . N 7 HOH A 58 458 60 HOH HOH . N 7 HOH A 59 459 61 HOH HOH . N 7 HOH A 60 460 62 HOH HOH . N 7 HOH A 61 461 63 HOH HOH . N 7 HOH A 62 462 64 HOH HOH . N 7 HOH A 63 463 65 HOH HOH . N 7 HOH A 64 464 66 HOH HOH . N 7 HOH A 65 465 67 HOH HOH . N 7 HOH A 66 466 68 HOH HOH . N 7 HOH A 67 467 69 HOH HOH . N 7 HOH A 68 468 70 HOH HOH . N 7 HOH A 69 469 71 HOH HOH . N 7 HOH A 70 470 72 HOH HOH . N 7 HOH A 71 471 73 HOH HOH . N 7 HOH A 72 472 74 HOH HOH . N 7 HOH A 73 473 75 HOH HOH . N 7 HOH A 74 474 76 HOH HOH . N 7 HOH A 75 475 77 HOH HOH . N 7 HOH A 76 476 78 HOH HOH . N 7 HOH A 77 477 79 HOH HOH . N 7 HOH A 78 478 80 HOH HOH . N 7 HOH A 79 479 81 HOH HOH . N 7 HOH A 80 480 82 HOH HOH . N 7 HOH A 81 481 83 HOH HOH . N 7 HOH A 82 482 84 HOH HOH . N 7 HOH A 83 483 85 HOH HOH . N 7 HOH A 84 484 88 HOH HOH . N 7 HOH A 85 485 90 HOH HOH . N 7 HOH A 86 486 92 HOH HOH . N 7 HOH A 87 487 93 HOH HOH . N 7 HOH A 88 488 94 HOH HOH . N 7 HOH A 89 489 96 HOH HOH . N 7 HOH A 90 490 97 HOH HOH . N 7 HOH A 91 491 98 HOH HOH . N 7 HOH A 92 492 99 HOH HOH . N 7 HOH A 93 493 100 HOH HOH . N 7 HOH A 94 494 101 HOH HOH . N 7 HOH A 95 495 102 HOH HOH . N 7 HOH A 96 496 103 HOH HOH . N 7 HOH A 97 497 104 HOH HOH . N 7 HOH A 98 498 106 HOH HOH . N 7 HOH A 99 499 107 HOH HOH . N 7 HOH A 100 500 108 HOH HOH . N 7 HOH A 101 501 111 HOH HOH . N 7 HOH A 102 502 112 HOH HOH . N 7 HOH A 103 503 113 HOH HOH . N 7 HOH A 104 504 114 HOH HOH . N 7 HOH A 105 505 115 HOH HOH . N 7 HOH A 106 506 116 HOH HOH . N 7 HOH A 107 507 117 HOH HOH . N 7 HOH A 108 508 118 HOH HOH . N 7 HOH A 109 509 120 HOH HOH . N 7 HOH A 110 510 121 HOH HOH . N 7 HOH A 111 511 122 HOH HOH . N 7 HOH A 112 512 123 HOH HOH . N 7 HOH A 113 513 124 HOH HOH . N 7 HOH A 114 514 125 HOH HOH . N 7 HOH A 115 515 127 HOH HOH . N 7 HOH A 116 516 129 HOH HOH . N 7 HOH A 117 517 130 HOH HOH . N 7 HOH A 118 518 131 HOH HOH . N 7 HOH A 119 519 132 HOH HOH . N 7 HOH A 120 520 133 HOH HOH . N 7 HOH A 121 521 136 HOH HOH . N 7 HOH A 122 522 137 HOH HOH . N 7 HOH A 123 523 138 HOH HOH . N 7 HOH A 124 524 139 HOH HOH . N 7 HOH A 125 525 140 HOH HOH . N 7 HOH A 126 526 141 HOH HOH . N 7 HOH A 127 527 142 HOH HOH . N 7 HOH A 128 528 143 HOH HOH . N 7 HOH A 129 529 144 HOH HOH . N 7 HOH A 130 530 145 HOH HOH . N 7 HOH A 131 531 146 HOH HOH . N 7 HOH A 132 532 147 HOH HOH . N 7 HOH A 133 533 148 HOH HOH . N 7 HOH A 134 534 149 HOH HOH . N 7 HOH A 135 535 150 HOH HOH . N 7 HOH A 136 536 152 HOH HOH . N 7 HOH A 137 537 153 HOH HOH . N 7 HOH A 138 538 154 HOH HOH . N 7 HOH A 139 539 155 HOH HOH . N 7 HOH A 140 540 156 HOH HOH . N 7 HOH A 141 541 157 HOH HOH . N 7 HOH A 142 542 158 HOH HOH . N 7 HOH A 143 543 159 HOH HOH . N 7 HOH A 144 544 160 HOH HOH . N 7 HOH A 145 545 161 HOH HOH . N 7 HOH A 146 546 164 HOH HOH . N 7 HOH A 147 547 165 HOH HOH . N 7 HOH A 148 548 166 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . K 4 -9.27 21.848 20.932 1 57.02 ? C1 GOL 310 A 1 HETATM 2 O O1 GOL . . . K 4 -7.985 21.305 21.151 1 56.16 ? O1 GOL 310 A 1 HETATM 3 C C2 GOL . . . K 4 -9.237 23.314 21.329 1 56.47 ? C2 GOL 310 A 1 HETATM 4 O O2 GOL . . . K 4 -7.92 23.747 21.098 1 59.92 ? O2 GOL 310 A 1 HETATM 5 C C3 GOL . . . K 4 -10.186 24.173 20.499 1 57.7 ? C3 GOL 310 A 1 HETATM 6 O O3 GOL . . . K 4 -11.541 23.851 20.729 1 59.08 ? O3 GOL 310 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 6 #