data_3PNP
#
_model_server_result.job_id            l-EaQKrZiogCMU1w7LemFQ 
_model_server_result.datetime_utc      '2025-03-05 22:21:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3pnp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":291}' 
#
_entry.id    3PNP 
#
_exptl.entry_id    3PNP 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3PNP 
_cell.length_a            93 
_cell.length_b            93 
_cell.length_c            93 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3PNP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        198 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 3' 
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_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_656 -z+1,x+1/2,-y+3/2 0 0 -1 1 0 0 0 -1 0 93 46.5 139.5 
3 'crystal symmetry operation' 11_466 y-1/2,-z+3/2,-x+1 0 1 0 0 0 -1 -1 0 0 -46.5 139.5 93 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B MG MG . A MG 291 1_555 D O HOH . A HOH 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? 
metalc ? metalc2 B MG MG . A MG 291 1_555 D O HOH . A HOH 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
metalc ? metalc3 B MG MG . A MG 291 1_555 D O HOH . A HOH 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
metalc ? metalc4 B MG MG . A MG 291 1_555 D O HOH . A HOH 354 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? 
metalc ? metalc5 B MG MG . A MG 291 1_555 D O HOH . A HOH 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
metalc ? metalc6 B MG MG . A MG 291 1_555 D O HOH . A HOH 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3PNP 
_atom_sites.fract_transf_matrix[1][1]    0.010753 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010753 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010753 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MG A 1 291 291 MG MG . 
C 3 PO4 A 1 290 290 PO4 PO4 . 
D 4 HOH A 1 292 292 HOH HOH . 
D 4 HOH A 2 293 293 HOH HOH . 
D 4 HOH A 3 294 294 HOH HOH . 
D 4 HOH A 4 295 295 HOH HOH . 
D 4 HOH A 5 296 296 HOH HOH . 
D 4 HOH A 6 297 297 HOH HOH . 
D 4 HOH A 7 298 298 HOH HOH . 
D 4 HOH A 8 299 299 HOH HOH . 
D 4 HOH A 9 300 300 HOH HOH . 
D 4 HOH A 10 301 301 HOH HOH . 
D 4 HOH A 11 302 302 HOH HOH . 
D 4 HOH A 12 303 303 HOH HOH . 
D 4 HOH A 13 304 304 HOH HOH . 
D 4 HOH A 14 305 305 HOH HOH . 
D 4 HOH A 15 306 306 HOH HOH . 
D 4 HOH A 16 307 307 HOH HOH . 
D 4 HOH A 17 308 308 HOH HOH . 
D 4 HOH A 18 309 309 HOH HOH . 
D 4 HOH A 19 310 310 HOH HOH . 
D 4 HOH A 20 311 311 HOH HOH . 
D 4 HOH A 21 312 312 HOH HOH . 
D 4 HOH A 22 313 313 HOH HOH . 
D 4 HOH A 23 314 314 HOH HOH . 
D 4 HOH A 24 315 315 HOH HOH . 
D 4 HOH A 25 316 316 HOH HOH . 
D 4 HOH A 26 317 317 HOH HOH . 
D 4 HOH A 27 318 318 HOH HOH . 
D 4 HOH A 28 319 319 HOH HOH . 
D 4 HOH A 29 320 320 HOH HOH . 
D 4 HOH A 30 321 321 HOH HOH . 
D 4 HOH A 31 322 322 HOH HOH . 
D 4 HOH A 32 323 323 HOH HOH . 
D 4 HOH A 33 324 324 HOH HOH . 
D 4 HOH A 34 325 325 HOH HOH . 
D 4 HOH A 35 326 326 HOH HOH . 
D 4 HOH A 36 327 327 HOH HOH . 
D 4 HOH A 37 328 328 HOH HOH . 
D 4 HOH A 38 329 329 HOH HOH . 
D 4 HOH A 39 330 330 HOH HOH . 
D 4 HOH A 40 331 331 HOH HOH . 
D 4 HOH A 41 332 332 HOH HOH . 
D 4 HOH A 42 333 333 HOH HOH . 
D 4 HOH A 43 334 334 HOH HOH . 
D 4 HOH A 44 335 335 HOH HOH . 
D 4 HOH A 45 336 336 HOH HOH . 
D 4 HOH A 46 337 337 HOH HOH . 
D 4 HOH A 47 338 338 HOH HOH . 
D 4 HOH A 48 339 339 HOH HOH . 
D 4 HOH A 49 340 340 HOH HOH . 
D 4 HOH A 50 341 341 HOH HOH . 
D 4 HOH A 51 342 342 HOH HOH . 
D 4 HOH A 52 343 343 HOH HOH . 
D 4 HOH A 53 344 344 HOH HOH . 
D 4 HOH A 54 345 345 HOH HOH . 
D 4 HOH A 55 346 346 HOH HOH . 
D 4 HOH A 56 347 347 HOH HOH . 
D 4 HOH A 57 348 348 HOH HOH . 
D 4 HOH A 58 349 349 HOH HOH . 
D 4 HOH A 59 350 350 HOH HOH . 
D 4 HOH A 60 351 351 HOH HOH . 
D 4 HOH A 61 352 352 HOH HOH . 
D 4 HOH A 62 353 353 HOH HOH . 
D 4 HOH A 63 354 354 HOH HOH . 
D 4 HOH A 64 355 355 HOH HOH . 
D 4 HOH A 65 356 356 HOH HOH . 
D 4 HOH A 66 357 357 HOH HOH . 
D 4 HOH A 67 358 358 HOH HOH . 
D 4 HOH A 68 359 359 HOH HOH . 
D 4 HOH A 69 360 360 HOH HOH . 
D 4 HOH A 70 361 361 HOH HOH . 
D 4 HOH A 71 362 362 HOH HOH . 
D 4 HOH A 72 363 363 HOH HOH . 
D 4 HOH A 73 364 364 HOH HOH . 
D 4 HOH A 74 365 365 HOH HOH . 
D 4 HOH A 75 366 366 HOH HOH . 
D 4 HOH A 76 367 367 HOH HOH . 
D 4 HOH A 77 368 368 HOH HOH . 
D 4 HOH A 78 369 369 HOH HOH . 
D 4 HOH A 79 370 370 HOH HOH . 
D 4 HOH A 80 371 371 HOH HOH . 
D 4 HOH A 81 372 372 HOH HOH . 
D 4 HOH A 82 373 373 HOH HOH . 
D 4 HOH A 83 374 374 HOH HOH . 
D 4 HOH A 84 375 375 HOH HOH . 
D 4 HOH A 85 376 376 HOH HOH . 
D 4 HOH A 86 377 377 HOH HOH . 
D 4 HOH A 87 378 378 HOH HOH . 
D 4 HOH A 88 379 379 HOH HOH . 
D 4 HOH A 89 380 380 HOH HOH . 
D 4 HOH A 90 381 381 HOH HOH . 
D 4 HOH A 91 382 382 HOH HOH . 
D 4 HOH A 92 383 383 HOH HOH . 
D 4 HOH A 93 384 384 HOH HOH . 
D 4 HOH A 94 385 385 HOH HOH . 
D 4 HOH A 95 386 386 HOH HOH . 
D 4 HOH A 96 387 387 HOH HOH . 
D 4 HOH A 97 388 388 HOH HOH . 
D 4 HOH A 98 389 389 HOH HOH . 
D 4 HOH A 99 390 390 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -11.005 
_atom_site.Cartn_y               94.566 
_atom_site.Cartn_z               76.66 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        17.41 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           291 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#