data_3POZ # _model_server_result.job_id gJE4jVnvCYbrKnYvoh4gUQ _model_server_result.datetime_utc '2024-11-16 19:10:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3poz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1023}' # _entry.id 3POZ # _exptl.entry_id 3POZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 547.957 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{2-[4-({3-chloro-4-[3-(trifluoromethyl)phenoxy]phenyl}amino)-5H-pyrrolo[3,2-d]pyrimidin-5-yl]ethyl}-3-hydroxy-3-methylbutanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3POZ _cell.length_a 46.806 _cell.length_b 68.881 _cell.length_c 104.558 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3POZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H25 Cl F3 N5 O3' _chem_comp.formula_weight 547.957 _chem_comp.id 03P _chem_comp.mon_nstd_flag . _chem_comp.name N-{2-[4-({3-chloro-4-[3-(trifluoromethyl)phenoxy]phenyl}amino)-5H-pyrrolo[3,2-d]pyrimidin-5-yl]ethyl}-3-hydroxy-3-methylbutanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms TAK-285 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C 03P doub 1 n y N1 C1 03P sing 2 n y C8 N3 03P sing 3 n n N3 C7 03P sing 4 n n N3 HN3 03P sing 5 n n N2 C4 03P sing 6 n y C5 C4 03P doub 7 n y C4 H4 03P sing 8 n n C2 C5 03P sing 9 n y C5 H5 03P sing 10 n n C7 C6 03P sing 11 n n C6 N2 03P sing 12 n n C6 H6 03P sing 13 n n C6 H6A 03P sing 14 n n C7 H7 03P sing 15 n n C7 H7A 03P sing 16 n n O C8 03P doub 17 n n C9 C8 03P sing 18 n n C11 C10 03P doub 19 n y C15 C10 03P sing 20 n y C10 N4 03P sing 21 n n O1 C13 03P sing 22 n n C13 C12 03P doub 23 n y C13 C14 03P sing 24 n y C14 C15 03P doub 25 n y C15 H15 03P sing 26 n n C18 C17 03P doub 27 n y C17 C16 03P sing 28 n y C17 H17 03P sing 29 n n C19 C20 03P doub 30 n y C20 C22 03P sing 31 n n C20 C21 03P sing 32 n y C16 C21 03P doub 33 n y C21 H21 03P sing 34 n n F C22 03P sing 35 n n C22 F2 03P sing 36 n n C22 F1 03P sing 37 n n C23 C24 03P sing 38 n n C24 H24 03P sing 39 n n C24 H24A 03P sing 40 n n C24 H24B 03P sing 41 n n C18 C19 03P sing 42 n y C19 H19 03P sing 43 n n C18 H18 03P sing 44 n n C16 O1 03P sing 45 n n CL C12 03P sing 46 n n C12 C11 03P sing 47 n y C11 H11 03P sing 48 n n C14 H14 03P sing 49 n n N4 C1 03P sing 50 n n N4 HN4 03P sing 51 n n C1 C3 03P doub 52 n y C N 03P sing 53 n y C H 03P sing 54 n n C3 C2 03P sing 55 n y C3 N2 03P sing 56 n y N C2 03P doub 57 n y C23 C9 03P sing 58 n n C9 H9 03P sing 59 n n C9 H9A 03P sing 60 n n C25 C23 03P sing 61 n n C23 O2 03P sing 62 n n O2 HO2 03P sing 63 n n C25 H25 03P sing 64 n n C25 H25A 03P sing 65 n n C25 H25B 03P sing 66 n n # _atom_sites.entry_id 3POZ _atom_sites.fract_transf_matrix[1][1] 0.021365 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014518 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009564 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 1 1 SO4 SO4 . C 2 SO4 A 1 2 2 SO4 SO4 . D 2 SO4 A 1 3 3 SO4 SO4 . E 3 03P A 1 1023 1 03P 03P . F 4 HOH A 1 4 4 HOH HOH . F 4 HOH A 2 5 5 HOH HOH . F 4 HOH A 3 6 6 HOH HOH . F 4 HOH A 4 7 7 HOH HOH . F 4 HOH A 5 8 8 HOH HOH . F 4 HOH A 6 9 9 HOH HOH . F 4 HOH A 7 10 10 HOH HOH . F 4 HOH A 8 11 11 HOH HOH . F 4 HOH A 9 12 12 HOH HOH . F 4 HOH A 10 13 13 HOH HOH . F 4 HOH A 11 14 14 HOH HOH . F 4 HOH A 12 15 15 HOH HOH . F 4 HOH A 13 16 16 HOH HOH . F 4 HOH A 14 17 17 HOH HOH . F 4 HOH A 15 18 18 HOH HOH . F 4 HOH A 16 19 19 HOH HOH . F 4 HOH A 17 20 20 HOH HOH . F 4 HOH A 18 21 21 HOH HOH . F 4 HOH A 19 22 22 HOH HOH . F 4 HOH A 20 23 23 HOH HOH . F 4 HOH A 21 24 24 HOH HOH . F 4 HOH A 22 25 25 HOH HOH . F 4 HOH A 23 26 26 HOH HOH . F 4 HOH A 24 27 27 HOH HOH . F 4 HOH A 25 28 28 HOH HOH . F 4 HOH A 26 29 29 HOH HOH . F 4 HOH A 27 30 30 HOH HOH . F 4 HOH A 28 31 31 HOH HOH . F 4 HOH A 29 32 32 HOH HOH . F 4 HOH A 30 33 33 HOH HOH . F 4 HOH A 31 34 34 HOH HOH . F 4 HOH A 32 35 35 HOH HOH . F 4 HOH A 33 36 36 HOH HOH . F 4 HOH A 34 37 37 HOH HOH . F 4 HOH A 35 38 38 HOH HOH . F 4 HOH A 36 39 39 HOH HOH . F 4 HOH A 37 40 40 HOH HOH . F 4 HOH A 38 41 41 HOH HOH . F 4 HOH A 39 42 42 HOH HOH . F 4 HOH A 40 43 43 HOH HOH . F 4 HOH A 41 44 44 HOH HOH . F 4 HOH A 42 45 45 HOH HOH . F 4 HOH A 43 46 46 HOH HOH . F 4 HOH A 44 47 47 HOH HOH . F 4 HOH A 45 48 48 HOH HOH . F 4 HOH A 46 49 49 HOH HOH . F 4 HOH A 47 50 50 HOH HOH . F 4 HOH A 48 51 51 HOH HOH . F 4 HOH A 49 52 52 HOH HOH . F 4 HOH A 50 53 53 HOH HOH . F 4 HOH A 51 54 54 HOH HOH . F 4 HOH A 52 55 55 HOH HOH . F 4 HOH A 53 56 56 HOH HOH . F 4 HOH A 54 57 57 HOH HOH . F 4 HOH A 55 58 58 HOH HOH . F 4 HOH A 56 59 59 HOH HOH . F 4 HOH A 57 60 60 HOH HOH . F 4 HOH A 58 61 61 HOH HOH . F 4 HOH A 59 62 62 HOH HOH . F 4 HOH A 60 63 63 HOH HOH . F 4 HOH A 61 64 64 HOH HOH . F 4 HOH A 62 65 65 HOH HOH . F 4 HOH A 63 66 66 HOH HOH . F 4 HOH A 64 67 67 HOH HOH . F 4 HOH A 65 68 68 HOH HOH . F 4 HOH A 66 69 69 HOH HOH . F 4 HOH A 67 70 70 HOH HOH . F 4 HOH A 68 71 71 HOH HOH . F 4 HOH A 69 72 72 HOH HOH . F 4 HOH A 70 73 73 HOH HOH . F 4 HOH A 71 74 74 HOH HOH . F 4 HOH A 72 75 75 HOH HOH . F 4 HOH A 73 76 76 HOH HOH . F 4 HOH A 74 77 77 HOH HOH . F 4 HOH A 75 78 78 HOH HOH . F 4 HOH A 76 79 79 HOH HOH . F 4 HOH A 77 80 80 HOH HOH . F 4 HOH A 78 81 81 HOH HOH . F 4 HOH A 79 82 82 HOH HOH . F 4 HOH A 80 83 83 HOH HOH . F 4 HOH A 81 84 84 HOH HOH . F 4 HOH A 82 85 85 HOH HOH . F 4 HOH A 83 86 86 HOH HOH . F 4 HOH A 84 87 87 HOH HOH . F 4 HOH A 85 88 88 HOH HOH . F 4 HOH A 86 89 89 HOH HOH . F 4 HOH A 87 90 90 HOH HOH . F 4 HOH A 88 91 91 HOH HOH . F 4 HOH A 89 92 92 HOH HOH . F 4 HOH A 90 93 93 HOH HOH . F 4 HOH A 91 94 94 HOH HOH . F 4 HOH A 92 95 95 HOH HOH . F 4 HOH A 93 96 96 HOH HOH . F 4 HOH A 94 97 97 HOH HOH . F 4 HOH A 95 98 98 HOH HOH . F 4 HOH A 96 99 99 HOH HOH . F 4 HOH A 97 100 100 HOH HOH . F 4 HOH A 98 101 101 HOH HOH . F 4 HOH A 99 102 102 HOH HOH . F 4 HOH A 100 103 103 HOH HOH . F 4 HOH A 101 104 104 HOH HOH . F 4 HOH A 102 105 105 HOH HOH . F 4 HOH A 103 106 106 HOH HOH . F 4 HOH A 104 107 107 HOH HOH . F 4 HOH A 105 108 108 HOH HOH . F 4 HOH A 106 109 109 HOH HOH . F 4 HOH A 107 110 110 HOH HOH . F 4 HOH A 108 111 111 HOH HOH . F 4 HOH A 109 112 112 HOH HOH . F 4 HOH A 110 113 113 HOH HOH . F 4 HOH A 111 114 114 HOH HOH . F 4 HOH A 112 115 115 HOH HOH . F 4 HOH A 113 116 116 HOH HOH . F 4 HOH A 114 117 117 HOH HOH . F 4 HOH A 115 118 118 HOH HOH . F 4 HOH A 116 119 119 HOH HOH . F 4 HOH A 117 120 120 HOH HOH . F 4 HOH A 118 121 121 HOH HOH . F 4 HOH A 119 122 122 HOH HOH . F 4 HOH A 120 123 123 HOH HOH . F 4 HOH A 121 124 124 HOH HOH . F 4 HOH A 122 125 125 HOH HOH . F 4 HOH A 123 126 126 HOH HOH . F 4 HOH A 124 1024 1 HOH HOH . F 4 HOH A 125 1025 2 HOH HOH . F 4 HOH A 126 1026 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 03P . . . E 3 14.734 33.559 13.161 1 17.98 ? N1 03P 1023 A 1 HETATM 2 N N3 03P . . . E 3 20.225 35.775 15.395 1 30.57 ? N3 03P 1023 A 1 HETATM 3 C C4 03P . . . E 3 15.89 35.034 17.235 1 21.42 ? C4 03P 1023 A 1 HETATM 4 C C5 03P . . . E 3 14.518 34.854 17.058 1 16.61 ? C5 03P 1023 A 1 HETATM 5 C C6 03P . . . E 3 18.073 34.788 16.054 1 24.01 ? C6 03P 1023 A 1 HETATM 6 C C7 03P . . . E 3 18.783 36.032 15.531 1 30.17 ? C7 03P 1023 A 1 HETATM 7 C C8 03P . . . E 3 20.715 35.001 14.407 1 30.73 ? C8 03P 1023 A 1 HETATM 8 C C10 03P . . . E 3 17.224 33.527 11.835 1 22.66 ? C10 03P 1023 A 1 HETATM 9 C C13 03P . . . E 3 17.55 32.921 9.098 1 24.1 ? C13 03P 1023 A 1 HETATM 10 C C15 03P . . . E 3 18.135 32.543 11.422 1 22.75 ? C15 03P 1023 A 1 HETATM 11 C C17 03P . . . E 3 18.404 30.743 6.486 1 25.76 ? C17 03P 1023 A 1 HETATM 12 C C20 03P . . . E 3 16.048 29.394 7.164 1 21.17 ? C20 03P 1023 A 1 HETATM 13 C C21 03P . . . E 3 16.266 30.695 7.625 1 22.7 ? C21 03P 1023 A 1 HETATM 14 C C22 03P . . . E 3 14.802 28.623 7.5 1 30.16 ? C22 03P 1023 A 1 HETATM 15 C C24 03P . . . E 3 24.121 33.228 14.043 1 50.94 ? C24 03P 1023 A 1 HETATM 16 F F2 03P . . . E 3 13.867 29.356 8.056 1 28.73 ? F2 03P 1023 A 1 HETATM 17 F F 03P . . . E 3 14.283 28.118 6.395 1 28.42 ? F 03P 1023 A 1 HETATM 18 F F1 03P . . . E 3 15.102 27.632 8.33 1 29.29 ? F1 03P 1023 A 1 HETATM 19 C C19 03P . . . E 3 17.012 28.782 6.348 1 24.27 ? C19 03P 1023 A 1 HETATM 20 C C18 03P . . . E 3 18.188 29.452 6.017 1 23.6 ? C18 03P 1023 A 1 HETATM 21 C C16 03P . . . E 3 17.456 31.366 7.3 1 22.06 ? C16 03P 1023 A 1 HETATM 22 O O1 03P . . . E 3 17.688 32.64 7.745 1 22.89 ? O1 03P 1023 A 1 HETATM 23 C C12 03P . . . E 3 16.654 33.895 9.521 1 20.4 ? C12 03P 1023 A 1 HETATM 24 CL CL 03P . . . E 3 15.676 34.766 8.319 1 23.88 ? CL 03P 1023 A 1 HETATM 25 C C11 03P . . . E 3 16.476 34.203 10.862 1 19.04 ? C11 03P 1023 A 1 HETATM 26 C C14 03P . . . E 3 18.317 32.25 10.052 1 21.43 ? C14 03P 1023 A 1 HETATM 27 N N4 03P . . . E 3 17.081 33.81 13.18 1 21.11 ? N4 03P 1023 A 1 HETATM 28 C C1 03P . . . E 3 15.875 33.886 13.812 1 17.88 ? C1 03P 1023 A 1 HETATM 29 C C 03P . . . E 3 13.519 33.645 13.738 1 20.61 ? C 03P 1023 A 1 HETATM 30 C C3 03P . . . E 3 15.733 34.309 15.146 1 15.94 ? C3 03P 1023 A 1 HETATM 31 C C2 03P . . . E 3 14.475 34.412 15.705 1 17.43 ? C2 03P 1023 A 1 HETATM 32 N N 03P . . . E 3 13.371 34.064 15.005 1 19.18 ? N 03P 1023 A 1 HETATM 33 N N2 03P . . . E 3 16.593 34.74 16.1 1 20.76 ? N2 03P 1023 A 1 HETATM 34 O O 03P . . . E 3 20.014 34.442 13.583 1 29.3 ? O 03P 1023 A 1 HETATM 35 C C9 03P . . . E 3 22.22 34.825 14.324 1 33.39 ? C9 03P 1023 A 1 HETATM 36 C C23 03P . . . E 3 22.607 33.386 13.956 1 44.14 ? C23 03P 1023 A 1 HETATM 37 O O2 03P . . . E 3 22.02 32.5 14.919 1 48.73 ? O2 03P 1023 A 1 HETATM 38 C C25 03P . . . E 3 22.147 32.956 12.561 1 45.99 ? C25 03P 1023 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 351 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 38 #