data_3PP2
#
_model_server_result.job_id            41KFoLnaMt4PfZwBJZsqcw 
_model_server_result.datetime_utc      '2024-11-22 22:53:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3pp2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":614}' 
#
_entry.id    3PP2 
#
_exptl.entry_id    3PP2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3PP2 
_cell.length_a            98.243 
_cell.length_b            98.243 
_cell.length_c            66.909 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3PP2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 5_555 x-y,-y,-z+2/3 1 0 0 0 -1 0 0 0 -1 0 0 44.606 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 T N N 
? 2 U N N 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 CIT doub 70 n n 
C1 O2 CIT sing 71 n n 
C1 C2 CIT sing 72 n n 
O2 HO2 CIT sing 73 n n 
C2 C3 CIT sing 74 n n 
C2 H21 CIT sing 75 n n 
C2 H22 CIT sing 76 n n 
C3 O7 CIT sing 77 n n 
C3 C4 CIT sing 78 n n 
C3 C6 CIT sing 79 n n 
O7 HO7 CIT sing 80 n n 
C4 C5 CIT sing 81 n n 
C4 H41 CIT sing 82 n n 
C4 H42 CIT sing 83 n n 
C5 O3 CIT doub 84 n n 
C5 O4 CIT sing 85 n n 
O4 HO4 CIT sing 86 n n 
C6 O5 CIT doub 87 n n 
C6 O6 CIT sing 88 n n 
O6 HO6 CIT sing 89 n n 
#
_atom_sites.entry_id                     3PP2 
_atom_sites.fract_transf_matrix[1][1]    0.010179 
_atom_sites.fract_transf_matrix[1][2]    0.005877 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011754 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014946 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CIT A 1 1 1 CIT CIT . 
D 2 CIT A 1 614 1 CIT CIT . 
E 2 CIT A 1 615 1 CIT CIT . 
F 3 UNX A 1 982 982 UNX UNX . 
G 3 UNX A 1 983 983 UNX UNX . 
H 3 UNX A 1 984 984 UNX UNX . 
I 3 UNX A 1 987 987 UNX UNX . 
J 3 UNX A 1 991 991 UNX UNX . 
K 3 UNX A 1 993 993 UNX UNX . 
L 3 UNX A 1 994 994 UNX UNX . 
M 3 UNX A 1 995 995 UNX UNX . 
N 3 UNX A 1 998 998 UNX UNX . 
O 3 UNX A 1 1002 1002 UNX UNX . 
P 3 UNX A 1 1004 1004 UNX UNX . 
Q 3 UNX A 1 1007 1007 UNX UNX . 
R 4 GOL B 1 1 1 GOL GOL . 
S 4 GOL B 1 614 1 GOL GOL . 
T 2 CIT B 1 615 1 CIT CIT . 
U 2 CIT B 1 616 1 CIT CIT . 
V 3 UNX B 1 985 985 UNX UNX . 
W 3 UNX B 1 988 988 UNX UNX . 
X 3 UNX B 1 989 989 UNX UNX . 
Y 3 UNX B 1 990 990 UNX UNX . 
Z 3 UNX B 1 992 992 UNX UNX . 
AA 3 UNX B 1 996 996 UNX UNX . 
BA 3 UNX B 1 997 997 UNX UNX . 
CA 3 UNX B 1 999 999 UNX UNX . 
DA 3 UNX B 1 1000 1000 UNX UNX . 
EA 3 UNX B 1 1001 1001 UNX UNX . 
FA 3 UNX B 1 1003 1003 UNX UNX . 
GA 3 UNX B 1 1005 1005 UNX UNX . 
HA 3 UNX B 1 1006 1006 UNX UNX . 
IA 5 HOH A 1 21 21 HOH HOH . 
IA 5 HOH A 2 22 22 HOH HOH . 
IA 5 HOH A 3 23 23 HOH HOH . 
IA 5 HOH A 4 26 26 HOH HOH . 
IA 5 HOH A 5 27 27 HOH HOH . 
IA 5 HOH A 6 28 28 HOH HOH . 
IA 5 HOH A 7 33 33 HOH HOH . 
IA 5 HOH A 8 36 36 HOH HOH . 
IA 5 HOH A 9 42 42 HOH HOH . 
IA 5 HOH A 10 44 44 HOH HOH . 
IA 5 HOH A 11 48 48 HOH HOH . 
IA 5 HOH A 12 50 50 HOH HOH . 
IA 5 HOH A 13 62 62 HOH HOH . 
IA 5 HOH A 14 63 63 HOH HOH . 
IA 5 HOH A 15 71 71 HOH HOH . 
IA 5 HOH A 16 75 75 HOH HOH . 
IA 5 HOH A 17 78 78 HOH HOH . 
IA 5 HOH A 18 80 80 HOH HOH . 
IA 5 HOH A 19 81 81 HOH HOH . 
IA 5 HOH A 20 94 94 HOH HOH . 
IA 5 HOH A 21 101 101 HOH HOH . 
IA 5 HOH A 22 103 103 HOH HOH . 
IA 5 HOH A 23 108 108 HOH HOH . 
IA 5 HOH A 24 109 109 HOH HOH . 
IA 5 HOH A 25 112 112 HOH HOH . 
IA 5 HOH A 26 113 113 HOH HOH . 
IA 5 HOH A 27 117 117 HOH HOH . 
IA 5 HOH A 28 118 118 HOH HOH . 
IA 5 HOH A 29 125 125 HOH HOH . 
IA 5 HOH A 30 127 127 HOH HOH . 
IA 5 HOH A 31 130 130 HOH HOH . 
IA 5 HOH A 32 131 131 HOH HOH . 
IA 5 HOH A 33 132 132 HOH HOH . 
IA 5 HOH A 34 135 135 HOH HOH . 
IA 5 HOH A 35 141 141 HOH HOH . 
IA 5 HOH A 36 142 142 HOH HOH . 
IA 5 HOH A 37 145 145 HOH HOH . 
IA 5 HOH A 38 146 146 HOH HOH . 
IA 5 HOH A 39 147 147 HOH HOH . 
IA 5 HOH A 40 148 148 HOH HOH . 
IA 5 HOH A 41 149 149 HOH HOH . 
IA 5 HOH A 42 150 150 HOH HOH . 
IA 5 HOH A 43 151 151 HOH HOH . 
IA 5 HOH A 44 154 154 HOH HOH . 
IA 5 HOH A 45 155 155 HOH HOH . 
IA 5 HOH A 46 156 156 HOH HOH . 
IA 5 HOH A 47 157 157 HOH HOH . 
IA 5 HOH A 48 159 159 HOH HOH . 
IA 5 HOH A 49 160 160 HOH HOH . 
IA 5 HOH A 50 161 161 HOH HOH . 
IA 5 HOH A 51 169 169 HOH HOH . 
IA 5 HOH A 52 172 172 HOH HOH . 
IA 5 HOH A 53 173 173 HOH HOH . 
IA 5 HOH A 54 180 180 HOH HOH . 
IA 5 HOH A 55 181 181 HOH HOH . 
IA 5 HOH A 56 182 182 HOH HOH . 
IA 5 HOH A 57 189 189 HOH HOH . 
IA 5 HOH A 58 191 191 HOH HOH . 
IA 5 HOH A 59 193 193 HOH HOH . 
IA 5 HOH A 60 194 194 HOH HOH . 
IA 5 HOH A 61 195 195 HOH HOH . 
IA 5 HOH A 62 198 198 HOH HOH . 
IA 5 HOH A 63 200 200 HOH HOH . 
IA 5 HOH A 64 201 201 HOH HOH . 
IA 5 HOH A 65 203 203 HOH HOH . 
IA 5 HOH A 66 205 205 HOH HOH . 
IA 5 HOH A 67 208 208 HOH HOH . 
IA 5 HOH A 68 212 212 HOH HOH . 
JA 5 HOH B 1 10 10 HOH HOH . 
JA 5 HOH B 2 17 17 HOH HOH . 
JA 5 HOH B 3 20 20 HOH HOH . 
JA 5 HOH B 4 45 45 HOH HOH . 
JA 5 HOH B 5 46 46 HOH HOH . 
JA 5 HOH B 6 54 54 HOH HOH . 
JA 5 HOH B 7 56 56 HOH HOH . 
JA 5 HOH B 8 57 57 HOH HOH . 
JA 5 HOH B 9 58 58 HOH HOH . 
JA 5 HOH B 10 60 60 HOH HOH . 
JA 5 HOH B 11 61 61 HOH HOH . 
JA 5 HOH B 12 69 69 HOH HOH . 
JA 5 HOH B 13 72 72 HOH HOH . 
JA 5 HOH B 14 77 77 HOH HOH . 
JA 5 HOH B 15 92 92 HOH HOH . 
JA 5 HOH B 16 98 98 HOH HOH . 
JA 5 HOH B 17 110 110 HOH HOH . 
JA 5 HOH B 18 114 114 HOH HOH . 
JA 5 HOH B 19 115 115 HOH HOH . 
JA 5 HOH B 20 116 116 HOH HOH . 
JA 5 HOH B 21 121 121 HOH HOH . 
JA 5 HOH B 22 122 122 HOH HOH . 
JA 5 HOH B 23 123 123 HOH HOH . 
JA 5 HOH B 24 124 124 HOH HOH . 
JA 5 HOH B 25 126 126 HOH HOH . 
JA 5 HOH B 26 133 133 HOH HOH . 
JA 5 HOH B 27 137 137 HOH HOH . 
JA 5 HOH B 28 138 138 HOH HOH . 
JA 5 HOH B 29 139 139 HOH HOH . 
JA 5 HOH B 30 140 140 HOH HOH . 
JA 5 HOH B 31 143 143 HOH HOH . 
JA 5 HOH B 32 144 144 HOH HOH . 
JA 5 HOH B 33 153 153 HOH HOH . 
JA 5 HOH B 34 162 162 HOH HOH . 
JA 5 HOH B 35 164 164 HOH HOH . 
JA 5 HOH B 36 165 165 HOH HOH . 
JA 5 HOH B 37 166 166 HOH HOH . 
JA 5 HOH B 38 167 167 HOH HOH . 
JA 5 HOH B 39 168 168 HOH HOH . 
JA 5 HOH B 40 174 174 HOH HOH . 
JA 5 HOH B 41 176 176 HOH HOH . 
JA 5 HOH B 42 177 177 HOH HOH . 
JA 5 HOH B 43 178 178 HOH HOH . 
JA 5 HOH B 44 179 179 HOH HOH . 
JA 5 HOH B 45 183 183 HOH HOH . 
JA 5 HOH B 46 184 184 HOH HOH . 
JA 5 HOH B 47 185 185 HOH HOH . 
JA 5 HOH B 48 186 186 HOH HOH . 
JA 5 HOH B 49 187 187 HOH HOH . 
JA 5 HOH B 50 188 188 HOH HOH . 
JA 5 HOH B 51 190 190 HOH HOH . 
JA 5 HOH B 52 192 192 HOH HOH . 
JA 5 HOH B 53 196 196 HOH HOH . 
JA 5 HOH B 54 197 197 HOH HOH . 
JA 5 HOH B 55 206 206 HOH HOH . 
JA 5 HOH B 56 207 207 HOH HOH . 
JA 5 HOH B 57 209 209 HOH HOH . 
JA 5 HOH B 58 210 210 HOH HOH . 
JA 5 HOH B 59 211 211 HOH HOH . 
JA 5 HOH B 60 617 1 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . D 2 64.608 8.606 15.369 1 51.48 ? C1 CIT 614 A 1 
HETATM 2 O O1 CIT . . . D 2 64.196 8.548 16.564 1 50.5 ? O1 CIT 614 A 1 
HETATM 3 O O2 CIT . . . D 2 63.821 9.076 14.533 1 54.65 ? O2 CIT 614 A 1 
HETATM 4 C C2 CIT . . . D 2 65.991 8.11 14.972 1 50.56 ? C2 CIT 614 A 1 
HETATM 5 C C3 CIT . . . D 2 66.572 8.619 13.643 1 48.04 ? C3 CIT 614 A 1 
HETATM 6 O O7 CIT . . . D 2 67.597 7.652 13.249 1 50.39 ? O7 CIT 614 A 1 
HETATM 7 C C4 CIT . . . D 2 65.695 8.78 12.404 1 43.71 ? C4 CIT 614 A 1 
HETATM 8 C C5 CIT . . . D 2 64.942 7.529 12.003 1 39.81 ? C5 CIT 614 A 1 
HETATM 9 O O3 CIT . . . D 2 65.491 6.435 11.719 1 39.31 ? O3 CIT 614 A 1 
HETATM 10 O O4 CIT . . . D 2 63.709 7.615 11.918 1 32.74 ? O4 CIT 614 A 1 
HETATM 11 C C6 CIT . . . D 2 67.146 10.014 13.935 1 50.65 ? C6 CIT 614 A 1 
HETATM 12 O O5 CIT . . . D 2 66.398 10.994 14.197 1 51.25 ? O5 CIT 614 A 1 
HETATM 13 O O6 CIT . . . D 2 68.376 10.194 13.937 1 53.32 ? O6 CIT 614 A 1 
#
_model_server_stats.io_time_ms              79 
_model_server_stats.parse_time_ms           105 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           403 
_model_server_stats.encode_time_ms          12 
_model_server_stats.element_count           13 
#