data_3PPA # _model_server_result.job_id g_3dOqlzks_RQZz-J64mng _model_server_result.datetime_utc '2024-10-18 20:26:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ppa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":319}' # _entry.id 3PPA # _exptl.entry_id 3PPA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3PPA _cell.length_a 74.17 _cell.length_b 74.17 _cell.length_c 194.52 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PPA _symmetry.cell_setting ? _symmetry.Int_Tables_number 180 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 -37.085 64.233104 0 3 'crystal symmetry operation' 9_555 -x,-x+y,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 64.84 4 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -37.085 64.233104 64.84 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 310 n n S O2 SO4 doub 311 n n S O3 SO4 sing 312 n n S O4 SO4 sing 313 n n # _atom_sites.entry_id 3PPA _atom_sites.fract_transf_matrix[1][1] 0.013483 _atom_sites.fract_transf_matrix[1][2] 0.007784 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015568 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005141 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 319 319 SO4 SO4 . C 2 SO4 A 1 320 320 SO4 SO4 . D 2 SO4 A 1 321 321 SO4 SO4 . E 3 CIT A 1 322 322 CIT CIT . F 4 HOH A 1 301 301 HOH HOH . F 4 HOH A 2 302 302 HOH HOH . F 4 HOH A 3 303 303 HOH HOH . F 4 HOH A 4 304 304 HOH HOH . F 4 HOH A 5 305 305 HOH HOH . F 4 HOH A 6 306 306 HOH HOH . F 4 HOH A 7 307 307 HOH HOH . F 4 HOH A 8 308 308 HOH HOH . F 4 HOH A 9 309 309 HOH HOH . F 4 HOH A 10 310 310 HOH HOH . F 4 HOH A 11 311 311 HOH HOH . F 4 HOH A 12 312 312 HOH HOH . F 4 HOH A 13 313 313 HOH HOH . F 4 HOH A 14 314 314 HOH HOH . F 4 HOH A 15 315 315 HOH HOH . F 4 HOH A 16 316 316 HOH HOH . F 4 HOH A 17 317 317 HOH HOH . F 4 HOH A 18 318 318 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 -29.105 56.69 53.649 1 184.23 ? S SO4 319 A 1 HETATM 2 O O1 SO4 . . . B 2 -27.715 57.121 53.47 1 188.49 ? O1 SO4 319 A 1 HETATM 3 O O2 SO4 . . . B 2 -29.996 57.589 52.894 1 188.76 ? O2 SO4 319 A 1 HETATM 4 O O3 SO4 . . . B 2 -29.259 55.319 53.153 1 190.13 ? O3 SO4 319 A 1 HETATM 5 O O4 SO4 . . . B 2 -29.45 56.728 55.076 1 189.42 ? O4 SO4 319 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #