data_3PPO # _model_server_result.job_id qeW1qfjEt8YgPaju8dSY2w _model_server_result.datetime_utc '2024-11-01 23:24:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ppo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 3PPO # _exptl.entry_id 3PPO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 162.207 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-3-carboxy-2-hydroxy-N,N,N-trimethylpropan-1-aminium _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PPO _cell.length_a 61.89 _cell.length_b 91.07 _cell.length_c 115.23 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PPO _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C7 H16 N O3 1' _chem_comp.formula_weight 162.207 _chem_comp.id DCK _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-3-carboxy-2-hydroxy-N,N,N-trimethylpropan-1-aminium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms D-carnitine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 N02 DCK sing 83 n n N02 C03 DCK sing 84 n n N02 C04 DCK sing 85 n n N02 C05 DCK sing 86 n n C05 C06 DCK sing 87 n n C06 O07 DCK sing 88 n n C06 C08 DCK sing 89 n n C08 C09 DCK sing 90 n n C09 O10 DCK doub 91 n n C09 O11 DCK sing 92 n n C01 H01 DCK sing 93 n n C01 H01A DCK sing 94 n n C01 H01B DCK sing 95 n n C03 H03 DCK sing 96 n n C03 H03A DCK sing 97 n n C03 H03B DCK sing 98 n n C04 H04 DCK sing 99 n n C04 H04A DCK sing 100 n n C04 H04B DCK sing 101 n n C05 H05 DCK sing 102 n n C05 H05A DCK sing 103 n n C06 H06 DCK sing 104 n n O07 HO07 DCK sing 105 n n C08 H08 DCK sing 106 n n C08 H08A DCK sing 107 n n O11 HO11 DCK sing 108 n n # _atom_sites.entry_id 3PPO _atom_sites.fract_transf_matrix[1][1] 0.016158 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010981 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008678 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DCK A 1 401 401 DCK DCK . D 2 DCK B 1 401 401 DCK DCK . E 3 HOH A 1 304 1 HOH HOH . E 3 HOH A 2 305 2 HOH HOH . E 3 HOH A 3 306 4 HOH HOH . E 3 HOH A 4 307 6 HOH HOH . E 3 HOH A 5 308 8 HOH HOH . E 3 HOH A 6 309 10 HOH HOH . E 3 HOH A 7 310 12 HOH HOH . E 3 HOH A 8 311 13 HOH HOH . E 3 HOH A 9 312 14 HOH HOH . E 3 HOH A 10 313 17 HOH HOH . E 3 HOH A 11 314 18 HOH HOH . E 3 HOH A 12 315 22 HOH HOH . E 3 HOH A 13 316 24 HOH HOH . E 3 HOH A 14 317 25 HOH HOH . E 3 HOH A 15 318 28 HOH HOH . E 3 HOH A 16 319 29 HOH HOH . E 3 HOH A 17 320 30 HOH HOH . E 3 HOH A 18 321 31 HOH HOH . E 3 HOH A 19 322 33 HOH HOH . E 3 HOH A 20 323 34 HOH HOH . E 3 HOH A 21 324 35 HOH HOH . E 3 HOH A 22 325 40 HOH HOH . E 3 HOH A 23 326 42 HOH HOH . E 3 HOH A 24 327 43 HOH HOH . E 3 HOH A 25 328 44 HOH HOH . E 3 HOH A 26 329 46 HOH HOH . E 3 HOH A 27 330 47 HOH HOH . E 3 HOH A 28 331 48 HOH HOH . E 3 HOH A 29 332 50 HOH HOH . E 3 HOH A 30 333 52 HOH HOH . E 3 HOH A 31 334 56 HOH HOH . E 3 HOH A 32 335 61 HOH HOH . E 3 HOH A 33 336 62 HOH HOH . E 3 HOH A 34 337 68 HOH HOH . E 3 HOH A 35 338 70 HOH HOH . E 3 HOH A 36 339 72 HOH HOH . E 3 HOH A 37 340 76 HOH HOH . E 3 HOH A 38 341 77 HOH HOH . E 3 HOH A 39 342 80 HOH HOH . E 3 HOH A 40 343 82 HOH HOH . E 3 HOH A 41 344 84 HOH HOH . E 3 HOH A 42 345 85 HOH HOH . E 3 HOH A 43 346 88 HOH HOH . E 3 HOH A 44 347 89 HOH HOH . E 3 HOH A 45 348 92 HOH HOH . E 3 HOH A 46 349 94 HOH HOH . E 3 HOH A 47 350 95 HOH HOH . E 3 HOH A 48 351 100 HOH HOH . E 3 HOH A 49 352 102 HOH HOH . E 3 HOH A 50 353 105 HOH HOH . E 3 HOH A 51 354 108 HOH HOH . E 3 HOH A 52 355 109 HOH HOH . E 3 HOH A 53 356 111 HOH HOH . E 3 HOH A 54 357 113 HOH HOH . E 3 HOH A 55 358 116 HOH HOH . E 3 HOH A 56 359 118 HOH HOH . E 3 HOH A 57 360 123 HOH HOH . E 3 HOH A 58 361 124 HOH HOH . E 3 HOH A 59 362 125 HOH HOH . E 3 HOH A 60 363 127 HOH HOH . E 3 HOH A 61 364 128 HOH HOH . F 3 HOH B 1 304 3 HOH HOH . F 3 HOH B 2 305 5 HOH HOH . F 3 HOH B 3 306 7 HOH HOH . F 3 HOH B 4 307 9 HOH HOH . F 3 HOH B 5 308 11 HOH HOH . F 3 HOH B 6 309 15 HOH HOH . F 3 HOH B 7 310 16 HOH HOH . F 3 HOH B 8 311 19 HOH HOH . F 3 HOH B 9 312 20 HOH HOH . F 3 HOH B 10 313 21 HOH HOH . F 3 HOH B 11 314 23 HOH HOH . F 3 HOH B 12 315 26 HOH HOH . F 3 HOH B 13 316 27 HOH HOH . F 3 HOH B 14 317 32 HOH HOH . F 3 HOH B 15 318 36 HOH HOH . F 3 HOH B 16 319 37 HOH HOH . F 3 HOH B 17 320 38 HOH HOH . F 3 HOH B 18 321 39 HOH HOH . F 3 HOH B 19 322 41 HOH HOH . F 3 HOH B 20 323 45 HOH HOH . F 3 HOH B 21 324 49 HOH HOH . F 3 HOH B 22 325 51 HOH HOH . F 3 HOH B 23 326 53 HOH HOH . F 3 HOH B 24 327 54 HOH HOH . F 3 HOH B 25 328 55 HOH HOH . F 3 HOH B 26 329 57 HOH HOH . F 3 HOH B 27 330 58 HOH HOH . F 3 HOH B 28 331 59 HOH HOH . F 3 HOH B 29 332 60 HOH HOH . F 3 HOH B 30 333 63 HOH HOH . F 3 HOH B 31 334 64 HOH HOH . F 3 HOH B 32 335 65 HOH HOH . F 3 HOH B 33 336 66 HOH HOH . F 3 HOH B 34 337 67 HOH HOH . F 3 HOH B 35 338 69 HOH HOH . F 3 HOH B 36 339 71 HOH HOH . F 3 HOH B 37 340 73 HOH HOH . F 3 HOH B 38 341 74 HOH HOH . F 3 HOH B 39 342 75 HOH HOH . F 3 HOH B 40 343 78 HOH HOH . F 3 HOH B 41 344 79 HOH HOH . F 3 HOH B 42 345 81 HOH HOH . F 3 HOH B 43 346 83 HOH HOH . F 3 HOH B 44 347 86 HOH HOH . F 3 HOH B 45 348 87 HOH HOH . F 3 HOH B 46 349 90 HOH HOH . F 3 HOH B 47 350 91 HOH HOH . F 3 HOH B 48 351 93 HOH HOH . F 3 HOH B 49 352 96 HOH HOH . F 3 HOH B 50 353 97 HOH HOH . F 3 HOH B 51 354 98 HOH HOH . F 3 HOH B 52 355 99 HOH HOH . F 3 HOH B 53 356 101 HOH HOH . F 3 HOH B 54 357 103 HOH HOH . F 3 HOH B 55 358 104 HOH HOH . F 3 HOH B 56 359 106 HOH HOH . F 3 HOH B 57 360 107 HOH HOH . F 3 HOH B 58 361 110 HOH HOH . F 3 HOH B 59 362 112 HOH HOH . F 3 HOH B 60 363 114 HOH HOH . F 3 HOH B 61 364 115 HOH HOH . F 3 HOH B 62 365 117 HOH HOH . F 3 HOH B 63 366 119 HOH HOH . F 3 HOH B 64 367 120 HOH HOH . F 3 HOH B 65 368 121 HOH HOH . F 3 HOH B 66 369 122 HOH HOH . F 3 HOH B 67 370 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 DCK . . . C 2 -1.785 28.833 10.446 1 5.79 ? C01 DCK 401 A 1 HETATM 2 N N02 DCK . . . C 2 -1.247 29.611 9.343 1 7.43 ? N02 DCK 401 A 1 HETATM 3 C C03 DCK . . . C 2 0.104 29.122 9.244 1 7.81 ? C03 DCK 401 A 1 HETATM 4 C C04 DCK . . . C 2 -2.041 29.294 8.179 1 4.89 ? C04 DCK 401 A 1 HETATM 5 C C05 DCK . . . C 2 -1.138 31.036 9.609 1 7.06 ? C05 DCK 401 A 1 HETATM 6 C C06 DCK . . . C 2 -2.071 32.107 9.103 1 7.12 ? C06 DCK 401 A 1 HETATM 7 O O07 DCK . . . C 2 -3.32 31.909 8.903 1 6.6 ? O07 DCK 401 A 1 HETATM 8 C C08 DCK . . . C 2 -1.724 33.517 9.527 1 7.78 ? C08 DCK 401 A 1 HETATM 9 C C09 DCK . . . C 2 -2.933 34.394 9.691 1 9.54 ? C09 DCK 401 A 1 HETATM 10 O O10 DCK . . . C 2 -4.031 34.005 9.79 1 10.23 ? O10 DCK 401 A 1 HETATM 11 O O11 DCK . . . C 2 -2.597 35.649 9.465 1 8.85 ? O11 DCK 401 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #