data_3PPP # _model_server_result.job_id NfhAG-Wx7y-eNjlkxaFQng _model_server_result.datetime_utc '2024-10-13 00:23:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ppp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 3PPP # _exptl.entry_id 3PPP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.154 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIMETHYL GLYCINE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3PPP _cell.length_a 61.821 _cell.length_b 91.782 _cell.length_c 115.334 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3PPP _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C5 H12 N O2 1' _chem_comp.formula_weight 118.154 _chem_comp.id BET _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIMETHYL GLYCINE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA BET sing 70 n n N C1 BET sing 71 n n N C2 BET sing 72 n n N C3 BET sing 73 n n CA C BET sing 74 n n CA HA2 BET sing 75 n n CA HA3 BET sing 76 n n C O BET doub 77 n n C OXT BET sing 78 n n OXT HXT BET sing 79 n n C1 H11 BET sing 80 n n C1 H12 BET sing 81 n n C1 H13 BET sing 82 n n C2 H21 BET sing 83 n n C2 H22 BET sing 84 n n C2 H23 BET sing 85 n n C3 H31 BET sing 86 n n C3 H32 BET sing 87 n n C3 H33 BET sing 88 n n # _atom_sites.entry_id 3PPP _atom_sites.fract_transf_matrix[1][1] 0.016176 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010895 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00867 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BET A 1 401 401 BET BET . D 2 BET B 1 401 401 BET BET . E 3 HOH A 1 304 2 HOH HOH . E 3 HOH A 2 305 4 HOH HOH . E 3 HOH A 3 306 5 HOH HOH . E 3 HOH A 4 307 6 HOH HOH . E 3 HOH A 5 308 7 HOH HOH . E 3 HOH A 6 309 10 HOH HOH . E 3 HOH A 7 310 11 HOH HOH . E 3 HOH A 8 311 13 HOH HOH . E 3 HOH A 9 312 14 HOH HOH . E 3 HOH A 10 313 16 HOH HOH . E 3 HOH A 11 314 20 HOH HOH . E 3 HOH A 12 315 21 HOH HOH . E 3 HOH A 13 316 22 HOH HOH . E 3 HOH A 14 317 24 HOH HOH . E 3 HOH A 15 318 28 HOH HOH . E 3 HOH A 16 319 30 HOH HOH . E 3 HOH A 17 320 32 HOH HOH . E 3 HOH A 18 321 33 HOH HOH . E 3 HOH A 19 322 34 HOH HOH . E 3 HOH A 20 323 36 HOH HOH . E 3 HOH A 21 324 37 HOH HOH . E 3 HOH A 22 325 38 HOH HOH . E 3 HOH A 23 326 42 HOH HOH . E 3 HOH A 24 327 43 HOH HOH . E 3 HOH A 25 328 44 HOH HOH . E 3 HOH A 26 329 46 HOH HOH . E 3 HOH A 27 330 52 HOH HOH . E 3 HOH A 28 331 53 HOH HOH . E 3 HOH A 29 332 55 HOH HOH . E 3 HOH A 30 333 58 HOH HOH . E 3 HOH A 31 334 60 HOH HOH . E 3 HOH A 32 335 61 HOH HOH . E 3 HOH A 33 336 62 HOH HOH . E 3 HOH A 34 337 65 HOH HOH . E 3 HOH A 35 338 66 HOH HOH . E 3 HOH A 36 339 67 HOH HOH . E 3 HOH A 37 340 68 HOH HOH . E 3 HOH A 38 341 69 HOH HOH . E 3 HOH A 39 342 70 HOH HOH . E 3 HOH A 40 343 71 HOH HOH . E 3 HOH A 41 344 72 HOH HOH . E 3 HOH A 42 345 74 HOH HOH . E 3 HOH A 43 346 77 HOH HOH . E 3 HOH A 44 347 81 HOH HOH . E 3 HOH A 45 348 84 HOH HOH . E 3 HOH A 46 349 86 HOH HOH . E 3 HOH A 47 350 87 HOH HOH . E 3 HOH A 48 351 88 HOH HOH . E 3 HOH A 49 352 89 HOH HOH . E 3 HOH A 50 353 90 HOH HOH . E 3 HOH A 51 354 91 HOH HOH . E 3 HOH A 52 355 95 HOH HOH . E 3 HOH A 53 356 98 HOH HOH . E 3 HOH A 54 357 99 HOH HOH . E 3 HOH A 55 358 100 HOH HOH . E 3 HOH A 56 359 102 HOH HOH . E 3 HOH A 57 360 103 HOH HOH . E 3 HOH A 58 361 105 HOH HOH . E 3 HOH A 59 362 107 HOH HOH . E 3 HOH A 60 363 108 HOH HOH . E 3 HOH A 61 364 111 HOH HOH . E 3 HOH A 62 365 113 HOH HOH . E 3 HOH A 63 366 118 HOH HOH . E 3 HOH A 64 367 127 HOH HOH . E 3 HOH A 65 368 128 HOH HOH . E 3 HOH A 66 369 129 HOH HOH . E 3 HOH A 67 370 130 HOH HOH . E 3 HOH A 68 371 131 HOH HOH . F 3 HOH B 1 304 1 HOH HOH . F 3 HOH B 2 305 3 HOH HOH . F 3 HOH B 3 306 8 HOH HOH . F 3 HOH B 4 307 9 HOH HOH . F 3 HOH B 5 308 12 HOH HOH . F 3 HOH B 6 309 15 HOH HOH . F 3 HOH B 7 310 17 HOH HOH . F 3 HOH B 8 311 18 HOH HOH . F 3 HOH B 9 312 19 HOH HOH . F 3 HOH B 10 313 23 HOH HOH . F 3 HOH B 11 314 25 HOH HOH . F 3 HOH B 12 315 26 HOH HOH . F 3 HOH B 13 316 27 HOH HOH . F 3 HOH B 14 317 29 HOH HOH . F 3 HOH B 15 318 31 HOH HOH . F 3 HOH B 16 319 35 HOH HOH . F 3 HOH B 17 320 39 HOH HOH . F 3 HOH B 18 321 40 HOH HOH . F 3 HOH B 19 322 41 HOH HOH . F 3 HOH B 20 323 45 HOH HOH . F 3 HOH B 21 324 47 HOH HOH . F 3 HOH B 22 325 48 HOH HOH . F 3 HOH B 23 326 49 HOH HOH . F 3 HOH B 24 327 50 HOH HOH . F 3 HOH B 25 328 51 HOH HOH . F 3 HOH B 26 329 54 HOH HOH . F 3 HOH B 27 330 56 HOH HOH . F 3 HOH B 28 331 57 HOH HOH . F 3 HOH B 29 332 59 HOH HOH . F 3 HOH B 30 333 63 HOH HOH . F 3 HOH B 31 334 64 HOH HOH . F 3 HOH B 32 335 73 HOH HOH . F 3 HOH B 33 336 75 HOH HOH . F 3 HOH B 34 337 76 HOH HOH . F 3 HOH B 35 338 78 HOH HOH . F 3 HOH B 36 339 79 HOH HOH . F 3 HOH B 37 340 80 HOH HOH . F 3 HOH B 38 341 82 HOH HOH . F 3 HOH B 39 342 83 HOH HOH . F 3 HOH B 40 343 85 HOH HOH . F 3 HOH B 41 344 92 HOH HOH . F 3 HOH B 42 345 93 HOH HOH . F 3 HOH B 43 346 94 HOH HOH . F 3 HOH B 44 347 96 HOH HOH . F 3 HOH B 45 348 97 HOH HOH . F 3 HOH B 46 349 101 HOH HOH . F 3 HOH B 47 350 104 HOH HOH . F 3 HOH B 48 351 106 HOH HOH . F 3 HOH B 49 352 109 HOH HOH . F 3 HOH B 50 353 110 HOH HOH . F 3 HOH B 51 354 112 HOH HOH . F 3 HOH B 52 355 114 HOH HOH . F 3 HOH B 53 356 115 HOH HOH . F 3 HOH B 54 357 116 HOH HOH . F 3 HOH B 55 358 117 HOH HOH . F 3 HOH B 56 359 119 HOH HOH . F 3 HOH B 57 360 120 HOH HOH . F 3 HOH B 58 361 121 HOH HOH . F 3 HOH B 59 362 122 HOH HOH . F 3 HOH B 60 363 123 HOH HOH . F 3 HOH B 61 364 124 HOH HOH . F 3 HOH B 62 365 125 HOH HOH . F 3 HOH B 63 366 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N BET . . . C 2 -29.623 -29.755 9.196 1 13.83 ? N BET 401 A 1 HETATM 2 C CA BET . . . C 2 -29.809 -31.151 8.875 1 14.11 ? CA BET 401 A 1 HETATM 3 C C BET . . . C 2 -28.759 -32.214 9.219 1 15.51 ? C BET 401 A 1 HETATM 4 O O BET . . . C 2 -28.661 -33.263 8.647 1 16.27 ? O BET 401 A 1 HETATM 5 O OXT BET . . . C 2 -28.038 -31.888 10.205 1 15.99 ? OXT BET 401 A 1 HETATM 6 C C1 BET . . . C 2 -30.724 -28.96 8.578 1 13.78 ? C1 BET 401 A 1 HETATM 7 C C2 BET . . . C 2 -28.365 -29.248 8.689 1 12.35 ? C2 BET 401 A 1 HETATM 8 C C3 BET . . . C 2 -29.696 -29.575 10.627 1 11.31 ? C3 BET 401 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #